Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1001 98.7 2e-15 >seq1001 Length=158095 Score = 98.7 bits (108), Expect = 2e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || | || ||| || || ||||||||||| || ||||| || || || || Sbjct 24561 CCACCACGCAGACGGAGCACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 24620 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | | ||||| || || || || ||||| ||||| || | || || ||||| || Sbjct 24621 AATGTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCTGGTGGG 24680 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || ||||| ||||||||||| | || ||||| || || || || || ||| ||| Sbjct 24681 ATGCCCTCCTTGTCTTGAATCTTCGACTTGACATTGTCGATGGTGTCTGAAGATTCCACT 24740 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | || || |||||||| || | ||||| || || || ||||| Sbjct 24741 TCTAGTGTGATAGTCTTGCCGGTAAGTGTCTTGACGAAGATTTGCAT 24787 Score = 89.7 bits (98), Expect = 1e-12 Identities = 146/208 (70%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | || || || || | ||| || || || || ||||| || || || |||| Sbjct 25015 TACCACCGCGCAGGCGGAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAG 25074 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| | | || || || ||||| || || || || || || | || ||||| |||| Sbjct 25075 AGAGAGTGCGGCCATCCTCGAGTTGCTTGCCGGCGAAAATGAGACGCTGCTGATCCGGAG 25134 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCT 82760 | ||||||||||| || || ||| ||||| || ||||| || || || || | || Sbjct 25135 GAATTCCTTCCTTGTCCTGGATC-TTGCTCTTCACATTGTCGATAGTGTCGGAGGACTCA 25193 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCA 82788 || || | || || |||||||| |||| Sbjct 25194 ACCTCGAGGGTGATGGTCTTGCCGGTCA 25221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981785297149209