Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1779 259 5e-64 seq1001 118 1e-21 >seq1779 Length=148467 Score = 259 bits (286), Expect = 5e-64 Identities = 1130/1750 (65%), Gaps = 61/1750 (3%) Strand=Plus/Minus Query 148061 CTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGAG---TCGCTTTATCTTCAT 148117 ||| || |||||||| ||||| || |||||||| | || || ||||| | || Sbjct 98636 CTGATCGATGAACGCACCACGATCGGCGGCCATCTGAACGATAGTTCGCTGACTG---AT 98580 Query 148118 CTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCAC 148177 ||||||| | |||||||||| ||||| | || || ||| ||||| || | Sbjct 98579 CTCCCAGACAGTCTTGTACAATGCCTTGAGGTCGTCCGGGATGTTTGGAATGCGTTGAAT 98520 Query 148178 CGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGAT 148237 ||||| | | |||| || | || ||| | || | | || | |||| Sbjct 98519 AGAGCCACCATCGGCAATGATGCGGTTCTTCATGTTCTCGGACCAGAGACCACGGTCGAC 98460 Query 148238 CAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAG 148297 ||||| | || ||| | | || || ||||| |||||||| || | ||| || || || Sbjct 98459 GAGGTCCTTGAGCAGCCAAGGGTTGACTACCTGGAACTCGCCAGCCAACACACGGCG-AG 98401 Query 148298 A-TACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCG 148356 | || | |||||| || | || || || |||||||| ||||| ||||| | || | Sbjct 98400 AGTAGATGTTGCTAGTGTATGGCTCGAAGCACTCGTTGAAGCCCATGATCTGGGAAGTGG 98341 Query 148357 TTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGC 148416 || || ||||| || || || || ||||| |||| |||| | | || || Sbjct 98340 AAGCAGTCGGCATTGGAGCCACGAGAAGGGAGTTTCGCACACCGTGCTCCGCGATCCTGG 98281 Query 148417 GCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCA 148476 ||| ||||| ||||| |||||||| | || || || |||||| ||||| || | Sbjct 98280 CCTTGAGAGCAGCCCAATCCCAGAGATCAGTTGGAGTGACACCCCACATATCGTATTGAA 98221 Query 148477 GAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCA 148536 | || | || ||| ||||| | ||| || || || | | |||| Sbjct 98220 GTTCACCCTTTGACACTGGTGAGCCTTCGTAGGTCTCGTATGGGCCAAGCTTCTCAGCCA 98161 Query 148537 GTTCGCAGCTCGCC-TCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGC 148595 | || ||| ||| || || ||| ||| ||| || || || ||| || | |||||| Sbjct 98160 GCTCACAGGACGCAGTCAAG-GCGGCGTGGTAGATGGTTTCAAAAATCTGGATATTGAGC 98102 Query 148596 AGCGCCGC-CGACTCGCTT-TCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGC 148653 || ||| | | | ||| | ||||| || || | || || || ||||| | Sbjct 98101 --CGGCGCGCTTCAGGAGAGTCGAAGGGCATGCGAAGAGCAAGGAAGGCATCAGCAAGAC 98044 Query 148654 CCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGC- 148712 |||| || || | || ||||| ||||| | |||| | ||| |||| | | Sbjct 98043 CCTGGACACCAAGACCGATGGGGCGGTGACGGAAGTTGCTCTTTCTCGC-CTCTGGCACT 97985 Query 148713 GGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTG 148772 || ||||||||| |||||| |||||| | ||| ||||||| | | || Sbjct 97984 GGGTAGTGGTTGATCTCGATGGTCTTGTTCAAATTCTTGGTGACCACCT--GAACCACTT 97927 Query 148773 C--GCAGCAATTCAAAATCGTACTTGTCATCTACGATG----CATCGGTT--CACGGCGA 148824 | | ||| | || ||||| | |||| | ||| | | ||| || |||| Sbjct 97926 CATGAAGCTTCTTGAAGTCGTAGATCTCATTCTCAATGTCGACGTATGTTGGCAGAGCGA 97867 Query 148825 TAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGC 148884 | || || || ||||| || ||| |||||| || || |||||| | |||||| | || Sbjct 97866 TCGAAGCAAGGTTGCAGACAGCCACCTCATCTGGAGCAGAGTACTCGATGATCTCAGTGC 97807 Query 148885 ACAGATTG---CTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACG 148941 | || || |||| ||| || | |||||| || |||||||||| |||||| | Sbjct 97806 AGAGGTTAGAACTGCG---GATTGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAG 97750 Query 148942 CGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATGAACCGAT 149001 | |||||||| || ||| | || ||||| || ||| ||| | || | ||| | Sbjct 97749 CATCCTTGTAAAGGATGAAAGGGCCGCCGGTCTCCGTCTGAGCCTCAAGAATGG--CATA 97692 Query 149002 GCAGGTC--CTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATA 149059 ||| || ||| ||||| || || | |||||||||| |||||| || Sbjct 97691 CCAGATCTTCTGGGCGCGAACAGTCTCGCGGCCACGACCCTCCTTCTCGTACTGCTCGTA 97632 Query 149060 CAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACAT 149119 ||| |||||| ||||||| || ||| ||||||| ||||||| | ||||||||| Sbjct 97631 GAGCTTCTCGAAGTCCTCGCCATAAACATCTGCGAGACCAGGGCACTCATTCGGGCACAT 97572 Query 149120 GAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGC 149179 ||| | |||| |||||| | | | || |||||||| |||||||| || | ||| || || Sbjct 97571 GAGGGTCCACTCGCCGTTCTCCTCAACACGCTTCATGAACAGATCCGGGATCCAAAGTGC 97512 Query 149180 GTACATGAGGTCGCGCGCCTTGCAG-TCTTCGGCGCCCATGTTGCGGCGCAGGTTGA-GC 149237 | | | |||||||| || ||| || || ||| ||| ||| || | | | Sbjct 97511 GAAGAAAAGGTCGCGGGCGC-GCACCTCCTCTTTGCCATGGTTCTTGCGGAGATCCATGA 97453 Query 149238 ACGCT-GAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTT 149296 | || ||| || | |||||||| ||||| | ||| | || | || || |||||| Sbjct 97452 ATGCCAGAACAT--CAGCGTGCCATGGCTCGAGGTAAATGGCAAAGGCACCGGGGCGCTT 97395 Query 149297 G---CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAAT 149353 | || |||||||| |||| ||| | ||||||| | || || | |||||| | | Sbjct 97394 GTTGCCACCCTGGTCAACGTAGCGAGCAGTGTTGTTGTAGACACGCAGCATAGGAACCAG 97335 Query 149354 GCCACTGGCAGTGCCGTTAGTAGAGCTAATG--CGACTGCCGCGCGCTCGCACTTTGTGC 149411 || ||| |||||||| || | ||| ||| ||| ||| || | ||| Sbjct 97334 TCCGTTGGACGTGCCGTTCGTGCCTCCGATGTACGA--GCCAGTCGCACGGATGCGGTGA 97277 Query 149412 ACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCGTCGA 149470 ||||||| || ||||| || ||| ||| ||||| || || ||| ||| || Sbjct 97276 ACGTTGAGACCAATGCCTCCAGCGTTCTTGGAGATCATAGCACAAGTCTT-GAGAGTGTC 97218 Query 149471 GTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGG 149530 |||||| ||||| ||||||||| ||||||| | || ||||| ||| | || | Sbjct 97217 GTAGATACCCTCAATGCTGTCGTCCTTCATGTCAACCAAGAAGCATGAGGCGAGCTGTGC 97158 Query 149531 AAAACGCGTGCCGGCCGCGAACATG-GTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCA 149589 | | |||| || || || || | | ||||| |||||||| || || || | | || Sbjct 97157 ATTAGGCGTACCAGC-GCTAAAAAGCGTGGGCGACGCGTGTGTGAAGTACTTGTTGGACA 97099 Query 149590 TCATCTCGTACGACTCGA--GCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGAC 149647 | | ||| | ||| | ||| | || ||||| ||||| ||||| || | || || Sbjct 97098 TGTAGTTGTAGGTCTCAATAGCAGCC--TCAATGTCCTCGCCGTGGATACCAACAGCCAC 97041 Query 149648 GCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCC 149707 ||||| | ||| |||||||||||||| || || ||| |||| ||||| ||| | Sbjct 97040 ACGCATGATCATTTGCTGCGGTCGCTCTGCAACCTTGCCGTCAATGCGGAGCAGGTA--C 96983 Query 149708 GTT--TTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATG 149765 | | || | |||||| |||||||||||| ||||| ||||| ||| | | | ||||| Sbjct 96982 GATCGCTCCAACGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCACGGTCATAGACAATG 96923 Query 149766 GCGGCGTCGA 149775 || | || || Sbjct 96922 GCTGAGTTGA 96913 >seq1001 Length=158095 Score = 118 bits (130), Expect = 1e-21 Identities = 134/177 (76%), Gaps = 2/177 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| || | ||| | | | |||||||| ||||||| Sbjct 25046 GGTGGACTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCA-TCCTCGAGTTGCTTGC 25104 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| ||||||| |||||||| || ||||| || ||||||||||| |||||| || Sbjct 25105 CGGCGAAAATGAGACGCTGCTGATCCGGAGGAATTCCTTCCTTGTCCTGGATCTTGCTCT 25164 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638 | | | || | ||||||| || ||| || |||| ||||| ||| |||||||||| Sbjct 25165 TCACATTGTCGATAGTGTCGGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTCA 25221 Score = 114 bits (126), Expect = 1e-20 Identities = 146/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521 |||||||| ||||| || ||||| ||| || || || || |||||||||||||||| Sbjct 24819 GTGGACTCCTTCTGGATGTTGTAGTCGGACAAGGTCCGGCCG--TCCTCGAGCTGCTTGC 24876 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || | ||||||||||| || || || || |||||||| |||||| || Sbjct 24877 CAGCGAAGATCAAGCGCTGCTGGTCTGGTGGAATACCCTCCTTGTCTTGGATCTTGGACT 24936 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | |||| ||||||| | ||| || |||| ||||| || || || || || | Sbjct 24937 TGACATTGTCAATAGTGTCGGAAGACTCAACCTCGAGGGTGATAGTCTTTCCAGTGAGCG 24996 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| || ||||| Sbjct 24997 TCTTGACGAAGATTTGCAT 25015 Score = 111 bits (122), Expect = 2e-19 Identities = 142/194 (73%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGCCCGCG 133526 ||| ||||| || ||||| |||| || || || || ||||| ||||||||||| ||| Sbjct 24596 CTCCTTCTGGATGTTGTAGTCGCTCAATGTCCGGCCG--TCCTCAAGCTGCTTGCCAGCG 24653 Query 133527 TAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGC 133586 | ||||| ||||||||||| || |||||||| |||||||| ||||| ||||| Sbjct 24654 AAGATGAGGCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCTTGAATCTTCGACTTGACA 24713 Query 133587 TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTT 133646 | || | ||||| | | ||||| || | |||| || |||||||| || || || Sbjct 24714 TTGTCGATGGTGTCTGAAGATTCCACTTCTAGTGTGATAGTCTTGCCGGTAAGTGTCTTG 24773 Query 133647 ACGAAAATCTGCAT 133660 ||||| || ||||| Sbjct 24774 ACGAAGATTTGCAT 24787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483400671566440