Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq1779 154 1e-32
>seq1779
Length=148467
Score = 154 bits (170), Expect = 1e-32
Identities = 571/876 (65%), Gaps = 29/876 (3%)
Strand=Plus/Minus
Query 147460 GCGATAGACGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCG 147519
||||| || || || |||||||| ||| ||| || | | ||||| | ||| ||
Sbjct 97870 GCGATCGAAGCAAGGTTGCAGACAGCCACCTCATCTGGAGCAGAGTACTCGATGATCTCA 97811
Query 147520 GCGCACAGGTTG---CTGC--ATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGAT 147574
| ||| ||||| |||| ||| || || | || | ||| ||||| || || |
Sbjct 97810 GTGCAGAGGTTAGAACTGCGGATTGTA-----CCAAGGTTCTTCTGGTTGCTCTTGCGGT 97756
Query 147575 TGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAA 147634
|||| || || ||| | || ||| | || ||||||||||| || | |||| ||
Sbjct 97755 TGCAAGCATCCTTGTAAAGGATGAAAGGGCCGCCGGTCTCCGTCTGAGCCTCAAGAATGG 97696
Query 147635 ACCTATGCAGGTC--CTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCG 147692
| || ||| || ||| || || || || || || ||||| || |||||| |
Sbjct 97695 -CATAC-CAGATCTTCTGGGCGCGAACAGTCTCGCGGCCACGACCCTCCTTCTCGTACTG 97638
Query 147693 CTCGTACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGG 147752
|||||| | | ||| || || ||||| || ||| || || || || |||| || |||
Sbjct 97637 CTCGTAGAGCTTCTCGAAGTCCTCGCCATAAACATCTGCGAGACCAGGGCACTCATTCGG 97578
Query 147753 ACACATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCA 147812
||||| || | |||| | ||| | | | ||| || ||| ||||||||||| | |||
Sbjct 97577 GCACATGAGGGTCCACTCGCCGTTCTCCTCAACACGCTTCATGAACAGATCCGGGATCCA 97518
Query 147813 CAGCGCGTACATAAGATCGCGCGCTTTGCA-ATCCTCGGCGCCCATGTTGCGTTTC--AA 147869
|| ||| | | ||| ||||| || ||| ||||| | ||||| | | || | |
Sbjct 97517 AAGTGCGAAGAAAAGGTCGCGGGC-GCGCACCTCCTCTTTG-CCATGGTTC-TTGCGGAG 97461
Query 147870 AT-TAAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTT 147928
|| | | | || | | | || |||||||| || || | ||| | ||| | |||||
Sbjct 97460 ATCCATGAATGCCAGA-ACATCAGCGTGCCATGGCTCGAGGTAAATGGCAAAGGCACCGG 97402
Query 147929 TACGC---TTTCCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGG 147985
||| || || |||||||| || | ||| | ||||||| | || |||| ||| |
Sbjct 97401 GGCGCTTGTTGCCACCCTGGTCAACGTAGCGAGCAGTGTTGTTGTAGACACGCAGCATAG 97342
Query 147986 GTTCCAGGCCGCTCGCAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTT 148045
| |||| ||| | | |||||||| ||| ||| | ||| || || |
Sbjct 97341 GAACCAGTCCGTTGGACGTGCCGTTCGTGCCTCCGATGTACGAGCCAGTCGCACGGATGC 97282
Query 148046 CGTGCACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAA-TC-GCCCAA 148103
||| ||||| | |||||||| || ||| ||| || || ||| ||| || |
Sbjct 97281 GGTGAACGTTGAGACCAATGCCTCCAGCGTTCTTGGAGATCATAGCACAAGTCTTGAGAG 97222
Query 148104 TGTCGTGTAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACAT 148163
|||| |||||| || || |||||||||| || | | ||| ||| || || || |
Sbjct 97221 TGTC--GTAGATACCCTCAATGCTGTCGTCCTTCATGTCAACCAAGAAGCATGAGGCGAG 97164
Query 148164 TTGCGGAATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTG 148223
|| | | | |||| || || ||||| ||||| |||||| || || | || |
Sbjct 97163 CTGTGCATTAGGCGTACCAGCGCTAAAAAGCGTGGGCGACGCGTGTGTGAAGTACTTGTT 97104
Query 148224 ACTCATCATGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGC 148283
||| | || ||||||||||| | || ||||| |||||||| || || | ||
Sbjct 97103 GGACATGTAGTTGTAGGTCTCAATAGCAGCCTCAATGTCCTCGCCGTGGATACCAACAGC 97044
Query 148284 GACGCGCATGAGCATGTGCTGTGGTCGTTCGGCAAC 148319
|| ||||||| ||| ||||| ||||| || |||||
Sbjct 97043 CACACGCATGATCATTTGCTGCGGTCGCTCTGCAAC 97008
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476591355101160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |