Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq1779 154 1e-32 >seq1779 Length=148467 Score = 154 bits (170), Expect = 1e-32 Identities = 571/876 (65%), Gaps = 29/876 (3%) Strand=Plus/Minus Query 147460 GCGATAGACGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCG 147519 ||||| || || || |||||||| ||| ||| || | | ||||| | ||| || Sbjct 97870 GCGATCGAAGCAAGGTTGCAGACAGCCACCTCATCTGGAGCAGAGTACTCGATGATCTCA 97811 Query 147520 GCGCACAGGTTG---CTGC--ATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGAT 147574 | ||| ||||| |||| ||| || || | || | ||| ||||| || || | Sbjct 97810 GTGCAGAGGTTAGAACTGCGGATTGTA-----CCAAGGTTCTTCTGGTTGCTCTTGCGGT 97756 Query 147575 TGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAA 147634 |||| || || ||| | || ||| | || ||||||||||| || | |||| || Sbjct 97755 TGCAAGCATCCTTGTAAAGGATGAAAGGGCCGCCGGTCTCCGTCTGAGCCTCAAGAATGG 97696 Query 147635 ACCTATGCAGGTC--CTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCG 147692 | || ||| || ||| || || || || || || ||||| || |||||| | Sbjct 97695 -CATAC-CAGATCTTCTGGGCGCGAACAGTCTCGCGGCCACGACCCTCCTTCTCGTACTG 97638 Query 147693 CTCGTACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGG 147752 |||||| | | ||| || || ||||| || ||| || || || || |||| || ||| Sbjct 97637 CTCGTAGAGCTTCTCGAAGTCCTCGCCATAAACATCTGCGAGACCAGGGCACTCATTCGG 97578 Query 147753 ACACATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCA 147812 ||||| || | |||| | ||| | | | ||| || ||| ||||||||||| | ||| Sbjct 97577 GCACATGAGGGTCCACTCGCCGTTCTCCTCAACACGCTTCATGAACAGATCCGGGATCCA 97518 Query 147813 CAGCGCGTACATAAGATCGCGCGCTTTGCA-ATCCTCGGCGCCCATGTTGCGTTTC--AA 147869 || ||| | | ||| ||||| || ||| ||||| | ||||| | | || | | Sbjct 97517 AAGTGCGAAGAAAAGGTCGCGGGC-GCGCACCTCCTCTTTG-CCATGGTTC-TTGCGGAG 97461 Query 147870 AT-TAAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTT 147928 || | | | || | | | || |||||||| || || | ||| | ||| | ||||| Sbjct 97460 ATCCATGAATGCCAGA-ACATCAGCGTGCCATGGCTCGAGGTAAATGGCAAAGGCACCGG 97402 Query 147929 TACGC---TTTCCGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGG 147985 ||| || || |||||||| || | ||| | ||||||| | || |||| ||| | Sbjct 97401 GGCGCTTGTTGCCACCCTGGTCAACGTAGCGAGCAGTGTTGTTGTAGACACGCAGCATAG 97342 Query 147986 GTTCCAGGCCGCTCGCAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTT 148045 | |||| ||| | | |||||||| ||| ||| | ||| || || | Sbjct 97341 GAACCAGTCCGTTGGACGTGCCGTTCGTGCCTCCGATGTACGAGCCAGTCGCACGGATGC 97282 Query 148046 CGTGCACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAA-TC-GCCCAA 148103 ||| ||||| | |||||||| || ||| ||| || || ||| ||| || | Sbjct 97281 GGTGAACGTTGAGACCAATGCCTCCAGCGTTCTTGGAGATCATAGCACAAGTCTTGAGAG 97222 Query 148104 TGTCGTGTAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACAT 148163 |||| |||||| || || |||||||||| || | | ||| ||| || || || | Sbjct 97221 TGTC--GTAGATACCCTCAATGCTGTCGTCCTTCATGTCAACCAAGAAGCATGAGGCGAG 97164 Query 148164 TTGCGGAATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTG 148223 || | | | |||| || || ||||| ||||| |||||| || || | || | Sbjct 97163 CTGTGCATTAGGCGTACCAGCGCTAAAAAGCGTGGGCGACGCGTGTGTGAAGTACTTGTT 97104 Query 148224 ACTCATCATGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGC 148283 ||| | || ||||||||||| | || ||||| |||||||| || || | || Sbjct 97103 GGACATGTAGTTGTAGGTCTCAATAGCAGCCTCAATGTCCTCGCCGTGGATACCAACAGC 97044 Query 148284 GACGCGCATGAGCATGTGCTGTGGTCGTTCGGCAAC 148319 || ||||||| ||| ||||| ||||| || ||||| Sbjct 97043 CACACGCATGATCATTTGCTGCGGTCGCTCTGCAAC 97008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476591355101160