Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq2619 194 2e-43 >seq2619 Length=45072 Score = 194 bits (214), Expect = 2e-43 Identities = 358/515 (70%), Gaps = 20/515 (4%) Strand=Plus/Plus Query 1455772 GCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCG 1455831 || ||||||| | |||||| || |||||||| || ||||| |||||||| |||||| | | Sbjct 29180 GCAGATATGGCAGATGTAC-AAGAAGGCCGAAGCATCCTTCTGGACCGCTGAGGAGATTG 29238 Query 1455832 ACCTCGGCGCCGACACGGTCCACTGGGTGTCG---CTGAGCGACGACGAGCGCCATTTCA 1455888 | || | ||| | ||||| | |||| ||| |||||||| | |||| Sbjct 29239 ATCTGTCCAAGGACCTTCACGACTGGAACAAGAGACTGAACGATGACGAGCGATACTTCA 29298 Query 1455889 TCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCC 1455948 || || ||||| || ||| |||||||| || || || || |||||||||| Sbjct 29299 TCTCACATGTCCTTGC-TTTCTTCGCCGCATCTGACGGAATTGTCAATGAGAACCTGGTT 29357 Query 1455949 GGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008 | ||||| | || || || | || || ||||| | || ||||| ||||||||| Sbjct 29358 GAGCGCTTCAGCGGTGAAGTACAGATACCCGAAGCACGATGCTTCTACGGATTCCAGATC 29417 Query 1456009 GCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGAC 1456068 || || ||||||||||| ||||| ||||| || || |||||||||||| ||| || Sbjct 29418 ATGATGGAGAACATCCACTCGGAAACATACTCCCTGCTTATCGACACCTACATCAGCGAA 29477 Query 1456069 CCGGTCGAGAAG-GACC--ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAA 1456125 || | || || || | | ||||| ||||||||||| | || | | | || Sbjct 29478 CC---CAAGCAGCGATCATATCTCTTCAACGCCATCGACAACATCCCATGTATCCGTAAG 29534 Query 1456126 AAGGCCGACTGGGCGATGAAGTGGATC---AACAAGGAGGGCCTCGACACTTTGCCGAGC 1456182 ||||| |||||||| || |||||| ||||| | |||||| |||||| | Sbjct 29535 AAGGCTGACTGGGCATTGCGATGGATCTCTGACAAGAA----CTCGAC-TTTTGCCTGCC 29589 Query 1456183 GGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCT 1456241 | | ||| ||| || | ||||||||||||||| ||||| || |||| |||||| Sbjct 29590 GATTGATCGCCTTCGCTGCCGTCGAGGGCATCTTCTTCTCTGGTTCTTTCGCATCCATCT 29649 Query 1456242 TTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTT 1456276 | ||| | |||||||| |||||||||||||||||| Sbjct 29650 TCTGGTTGAAGAAGCGTGGCCTCATGCCCGGTCTT 29684 Score = 109 bits (120), Expect = 8e-18 Identities = 179/253 (71%), Gaps = 4/253 (2%) Strand=Plus/Plus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 |||||||| || || || | ||| ||| |||| || ||| || |||| || || | Sbjct 29793 ATCATCGTTGAAGCTGTTGCGATTGAGCAAGAATTCCTCACAGATGCGCTCCCAGTCATG 29852 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 ||| |||||||||| || | |||||||||||||||||| || ||| ||||| ||||| | Sbjct 29853 CTCCTCGGCATGAATGCTAA-GCTCATGTGCCAGTACATCGAGTTT-GTCGCGGACCGTC 29910 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 || | ||| ||||| ||||| |||| | ||||||| ||| | ||| Sbjct 29911 TGTTGTTGGCACTCGGGAATC-AGAAGTTCTACAACGCCACCAACCCATTCGATTTCATG 29969 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACGCC 1456761 ||| || || || | |||||||||||||| |||||| || | ||| || ||| Sbjct 29970 GAGAACATTTCTCTAGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAG 30029 Query 1456762 AAGGCCGGCGTCA 1456774 |||||||| |||| Sbjct 30030 AAGGCCGGTGTCA 30042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177489918927622