Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq2619 194 2e-43
>seq2619
Length=45072
Score = 194 bits (214), Expect = 2e-43
Identities = 358/515 (70%), Gaps = 20/515 (4%)
Strand=Plus/Plus
Query 1455772 GCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCG 1455831
|| ||||||| | |||||| || |||||||| || ||||| |||||||| |||||| | |
Sbjct 29180 GCAGATATGGCAGATGTAC-AAGAAGGCCGAAGCATCCTTCTGGACCGCTGAGGAGATTG 29238
Query 1455832 ACCTCGGCGCCGACACGGTCCACTGGGTGTCG---CTGAGCGACGACGAGCGCCATTTCA 1455888
| || | ||| | ||||| | |||| ||| |||||||| | ||||
Sbjct 29239 ATCTGTCCAAGGACCTTCACGACTGGAACAAGAGACTGAACGATGACGAGCGATACTTCA 29298
Query 1455889 TCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCC 1455948
|| || ||||| || ||| |||||||| || || || || ||||||||||
Sbjct 29299 TCTCACATGTCCTTGC-TTTCTTCGCCGCATCTGACGGAATTGTCAATGAGAACCTGGTT 29357
Query 1455949 GGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008
| ||||| | || || || | || || ||||| | || ||||| |||||||||
Sbjct 29358 GAGCGCTTCAGCGGTGAAGTACAGATACCCGAAGCACGATGCTTCTACGGATTCCAGATC 29417
Query 1456009 GCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGAC 1456068
|| || ||||||||||| ||||| ||||| || || |||||||||||| ||| ||
Sbjct 29418 ATGATGGAGAACATCCACTCGGAAACATACTCCCTGCTTATCGACACCTACATCAGCGAA 29477
Query 1456069 CCGGTCGAGAAG-GACC--ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAA 1456125
|| | || || || | | ||||| ||||||||||| | || | | | ||
Sbjct 29478 CC---CAAGCAGCGATCATATCTCTTCAACGCCATCGACAACATCCCATGTATCCGTAAG 29534
Query 1456126 AAGGCCGACTGGGCGATGAAGTGGATC---AACAAGGAGGGCCTCGACACTTTGCCGAGC 1456182
||||| |||||||| || |||||| ||||| | |||||| |||||| |
Sbjct 29535 AAGGCTGACTGGGCATTGCGATGGATCTCTGACAAGAA----CTCGAC-TTTTGCCTGCC 29589
Query 1456183 GGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCT 1456241
| | ||| ||| || | ||||||||||||||| ||||| || |||| ||||||
Sbjct 29590 GATTGATCGCCTTCGCTGCCGTCGAGGGCATCTTCTTCTCTGGTTCTTTCGCATCCATCT 29649
Query 1456242 TTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTT 1456276
| ||| | |||||||| ||||||||||||||||||
Sbjct 29650 TCTGGTTGAAGAAGCGTGGCCTCATGCCCGGTCTT 29684
Score = 109 bits (120), Expect = 8e-18
Identities = 179/253 (71%), Gaps = 4/253 (2%)
Strand=Plus/Plus
Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582
|||||||| || || || | ||| ||| |||| || ||| || |||| || || |
Sbjct 29793 ATCATCGTTGAAGCTGTTGCGATTGAGCAAGAATTCCTCACAGATGCGCTCCCAGTCATG 29852
Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642
||| |||||||||| || | |||||||||||||||||| || ||| ||||| ||||| |
Sbjct 29853 CTCCTCGGCATGAATGCTAA-GCTCATGTGCCAGTACATCGAGTTT-GTCGCGGACCGTC 29910
Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702
|| | ||| ||||| ||||| |||| | ||||||| ||| | |||
Sbjct 29911 TGTTGTTGGCACTCGGGAATC-AGAAGTTCTACAACGCCACCAACCCATTCGATTTCATG 29969
Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACGCC 1456761
||| || || || | |||||||||||||| |||||| || | ||| || |||
Sbjct 29970 GAGAACATTTCTCTAGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAG 30029
Query 1456762 AAGGCCGGCGTCA 1456774
|||||||| ||||
Sbjct 30030 AAGGCCGGTGTCA 30042
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177489918927622
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |