Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1001 104 2e-17 seq224 84.2 2e-11 >seq1001 Length=158095 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| |||||| || |||| || |||||||| || || || Sbjct 24824 CTCCTTCTGGATGTTGTAGTCGGACAAGGTCCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 24883 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| ||||||||||| | |||| | ||||||||| |||||| ||| | | | Sbjct 24884 GATCAAGCGCTGCTGGTCTGGTGGAATACCCTCCTTGTCTTGGATCTTGGACTTGACATT 24943 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || || ||||| | ||||| || || || || | || || || Sbjct 24944 GTCAATAGTGTCGGAAGACTCAACCTCGAGGGTGATAGTCTTTCCAGTGAGCGTCTTGAC 25003 Query 35725 AAATATCTGCAT 35736 || || ||||| Sbjct 25004 GAAGATTTGCAT 25015 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 35507 TTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCG 35566 ||||||||||| | | | |||||| || | || |||||||| || |||||||| ||| Sbjct 24558 TTTCCACCACGCAGACGGAGCACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCG 24617 Query 35567 GCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAA 35626 ||| || || |||| || |||||||| || || || || | ||||||||||| | Sbjct 24618 CTCAATGTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCTGGT 24677 Query 35627 GGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCC 35686 || | || ||||||||| ||||| ||| | | | | | ||||| |||||| Sbjct 24678 GGGATGCCCTCCTTGTCTTGAATCTTCGACTTGACATTGTCGATGGTGTCTGAAGATTCC 24737 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || | ||||| || || || || | || || || || || ||||| Sbjct 24738 ACTTCTAGTGTGATAGTCTTGCCGGTAAGTGTCTTGACGAAGATTTGCAT 24787 >seq224 Length=177688 Score = 84.2 bits (92), Expect = 2e-11 Identities = 118/166 (71%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606 ||||||| |||||||| || | ||| || || | || |||| ||||| || || || | Sbjct 19041 CCTTTTGGATGTTGTAGTCAGACAAAGTGCGGCCATCCTCCAATTGCTTTCCAGCGAAGA 19100 Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666 ||| ||||||||||||| |||| | |||||||||| ||||| ||| | | | Sbjct 19101 TCAGACGCTGCTGGTCCGGTGGAATTCCCTCCTTGTCCTGAATCTTGCTCTTGACATTAT 19160 Query 35667 CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 | | |||||| || || ||||| | ||||| || || ||||| Sbjct 19161 CGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 19206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450774830081480