Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1001 122 9e-23 >seq1001 Length=158095 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| || ||||| ||||| || |||||||||||| Sbjct 24789 CCACCACGGAGACGAAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 24848 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| |||||||| ||||| || || ||||| |||||||| || || || Sbjct 24849 AAGGTCCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCTGGTGGA 24908 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || ||||| || || ||||| ||| | |||||||| || || || Sbjct 24909 ATACCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCGGAAGACTCAACC 24968 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || || || || | || || ||||| |||||||| Sbjct 24969 TCGAGGGTGATAGTCTTTCCAGTGAGCGTCTTGACGAAGATTTGCAT 25015 Score = 113 bits (124), Expect = 5e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543 ||||| || | || || | ||| | ||| || ||| ||||| || |||||||||||| Sbjct 24558 TTTCCACCACGCAGACGGAGCACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCG 24617 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 | | || | ||| || ||||| ||||| || || || | |||||||| || || Sbjct 24618 CTCAATGTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCTGGT 24677 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || ||||| || || |||||||| || ||||| ||| | ||||| || |||||| Sbjct 24678 GGGATGCCCTCCTTGTCTTGAATCTTCGACTTGACATTGTCGATGGTGTCTGAAGATTCC 24737 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || || || ||||| | || || ||||| |||||||| Sbjct 24738 ACTTCTAGTGTGATAGTCTTGCCGGTAAGTGTCTTGACGAAGATTTGCAT 24787 Score = 104 bits (114), Expect = 2e-17 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || ||||| ||||| |||||||||||||| | ||| | || ||| Sbjct 25035 ACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCCTCG 25094 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 || || ||||| || ||||| | |||||||||||| || || || ||||| || || || Sbjct 25095 AGTTGCTTGCCGGCGAAAATGAGACGCTGCTGATCCGGAGGAATTCCTTCCTTGTCCTGG 25154 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || ||| | |||||||| || || || ||||| || ||||| || Sbjct 25155 ATCTTGCTCTTCACATTGTCGATAGTGTCGGAGGACTCAACCTCGAGGGTGATGGTCTTG 25214 Query 134685 CCGGT 134689 ||||| Sbjct 25215 CCGGT 25219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505377356474120