Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq2619 125 1e-23 >seq2619 Length=45072 Score = 125 bits (138), Expect = 1e-23 Identities = 374/571 (65%), Gaps = 16/571 (3%) Strand=Plus/Minus Query 39608 AACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAA 39667 |||| | ||| |||||||| || | |||||| || | || ||||| || || Sbjct 29749 AACAGCAGGCATGCGAAGTCTGTGTGCATGCCCTCGTCACGCGAGATCAATTCATTCGAG 29690 Query 39668 AATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCA 39727 ||||| || || ||||| || |||||||| || | ||| || |||| || ||||| ||| Sbjct 29689 AATGTAAGACCGGGCATGAGGCCACGCTTCTTCAACCAGAAGATGGATGCGAAAGAACCA 29630 Query 39728 GAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTG---TA 39784 || ||||||||||| || || || || || || | | || | || | | | Sbjct 29629 GAGAAGAAGATGCCCTCGACGGCAGCGAAGGCGATCAATCGGCAGGCAAAAGTCGAGTTC 29570 Query 39785 TCATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCT 39844 | | | ||||| | |||||| ||||| ||||| | ||| || || | || Sbjct 29569 TTGTCAGAGATCCATCGCAATGCCCAGTCAGCCTTCTTACGGATACATGGGATGTTGTCG 29510 Query 39845 ATAGCATTAAAGAGATAATGTT--TTTCATCACTATCTTTAACATATGTATCTATTAACA 39902 || || || ||||||| ||| | | | | | || | | || || || || | || Sbjct 29509 ATGGCGTTGAAGAGAT-ATGATCGCTGCTTGGGT-TCGCTGATGTAGGTGTCGATAAGCA 29452 Query 39903 GACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTG 39962 | || |||| || |||||||| || ||| ||||| |||||||| || |||| || Sbjct 29451 GGGAGTATGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCATCGTG 29392 Query 39963 CTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCAT 40022 |||| | || ||||| || | || | || ||| || ||||| || ||||| | Sbjct 29391 CTTCGGGTATCTGTACTTCACCGCTGAAGCGCTCAACCAGGTTCTCATTGACAATTCCGT 29332 Query 40023 CACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATAT---TTTTCATCG---GGTG 40076 || ||||| || || || | |||||| || || ||| | |||||| || Sbjct 29331 CAGATGCGGCGAAGAAAGCAAGGACATGTGAGATGAAGTATCGCTCGTCATCGTTCAGTC 29272 Query 40077 TCAATTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACG 40136 || || |||||||| | | || || || | ||| | || ||||| ||||| || | Sbjct 29271 TC---TTGTTCCAGTCGTGAAGGTCCTTGGACAGATCAATCTCCTCAGCGGTCCAGAAGG 29215 Query 40137 ACGCCTCTGCCTTTTTGTACATGTTCCATAT 40167 | || || ||||| |||||||| | |||||| Sbjct 29214 ATGCTTCGGCCTTCTTGTACATCTGCCATAT 29184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686880198834840