Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq2619 125 1e-23
>seq2619
Length=45072
Score = 125 bits (138), Expect = 1e-23
Identities = 374/571 (65%), Gaps = 16/571 (3%)
Strand=Plus/Minus
Query 39608 AACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAA 39667
|||| | ||| |||||||| || | |||||| || | || ||||| || ||
Sbjct 29749 AACAGCAGGCATGCGAAGTCTGTGTGCATGCCCTCGTCACGCGAGATCAATTCATTCGAG 29690
Query 39668 AATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCA 39727
||||| || || ||||| || |||||||| || | ||| || |||| || ||||| |||
Sbjct 29689 AATGTAAGACCGGGCATGAGGCCACGCTTCTTCAACCAGAAGATGGATGCGAAAGAACCA 29630
Query 39728 GAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTG---TA 39784
|| ||||||||||| || || || || || || | | || | || | | |
Sbjct 29629 GAGAAGAAGATGCCCTCGACGGCAGCGAAGGCGATCAATCGGCAGGCAAAAGTCGAGTTC 29570
Query 39785 TCATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCT 39844
| | | ||||| | |||||| ||||| ||||| | ||| || || | ||
Sbjct 29569 TTGTCAGAGATCCATCGCAATGCCCAGTCAGCCTTCTTACGGATACATGGGATGTTGTCG 29510
Query 39845 ATAGCATTAAAGAGATAATGTT--TTTCATCACTATCTTTAACATATGTATCTATTAACA 39902
|| || || ||||||| ||| | | | | | || | | || || || || | ||
Sbjct 29509 ATGGCGTTGAAGAGAT-ATGATCGCTGCTTGGGT-TCGCTGATGTAGGTGTCGATAAGCA 29452
Query 39903 GACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTG 39962
| || |||| || |||||||| || ||| ||||| |||||||| || |||| ||
Sbjct 29451 GGGAGTATGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAATCCGTAGAAGCATCGTG 29392
Query 39963 CTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCAT 40022
|||| | || ||||| || | || | || ||| || ||||| || ||||| |
Sbjct 29391 CTTCGGGTATCTGTACTTCACCGCTGAAGCGCTCAACCAGGTTCTCATTGACAATTCCGT 29332
Query 40023 CACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATAT---TTTTCATCG---GGTG 40076
|| ||||| || || || | |||||| || || ||| | |||||| ||
Sbjct 29331 CAGATGCGGCGAAGAAAGCAAGGACATGTGAGATGAAGTATCGCTCGTCATCGTTCAGTC 29272
Query 40077 TCAATTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACG 40136
|| || |||||||| | | || || || | ||| | || ||||| ||||| || |
Sbjct 29271 TC---TTGTTCCAGTCGTGAAGGTCCTTGGACAGATCAATCTCCTCAGCGGTCCAGAAGG 29215
Query 40137 ACGCCTCTGCCTTTTTGTACATGTTCCATAT 40167
| || || ||||| |||||||| | ||||||
Sbjct 29214 ATGCTTCGGCCTTCTTGTACATCTGCCATAT 29184
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686880198834840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |