Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq1779 105 6e-18
seq1001 89.7 4e-13
>seq1779
Length=148467
Score = 105 bits (116), Expect = 6e-18
Identities = 278/421 (66%), Gaps = 5/421 (1%)
Strand=Plus/Minus
Query 131615 GGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACAAATCCGGCACC 131674
|| ||||| || | |||| ||||||||| ||||| |||||||| |||| |||||| | |
Sbjct 97579 GGGCACATGAGGGTCCACTCGCCGTTCTCCTCAACACGCTTCATGAACAGATCCGGGATC 97520
Query 131675 CATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAtttttttCAA- 131733
|| | ||| | || || || | || ||| ||| | || || || || |
Sbjct 97519 CAAAGTGCGAAGAAAAGGTCGCGGGCGCGCACCTCCTCTTTGCC-ATGGTTCTTGCGGAG 97461
Query 131734 ATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGCGCCTTT 131793
|| | || ||| || || || ||||| || || | || | || | || ||
Sbjct 97460 ATCCATGAATGCCAGAACATCAGCGTGCCATGGCTCGAGGTAAATGGCAAAGGCACCGGG 97401
Query 131794 GCGCTTA---CCGCCTTGATTAACATGACGAACCATGTTGTTGTATACGCGCAACATGGG 131850
|||||| || || || | ||| | ||| | |||||||||| || |||| ||| ||
Sbjct 97400 GCGCTTGTTGCCACCCTGGTCAACGTAGCGAGCAGTGTTGTTGTAGACACGCAGCATAGG 97341
Query 131851 CTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTGATTTT 131910
||| ||||||| | || || |||| ||||| |||| | || | |||
Sbjct 97340 AACCAGTCCGTTGGACGTGCCGTTCGTGCCTCCGATGTACGAGCCAGTCGCACGGATGCG 97281
Query 131911 GTGAACGTTGAGTCCAATACCTCCGCCGTATTTAGAGATTAGTGCGCATTTGGTTAGAGT 131970
|||||||||||| ||||| ||||| ||| || ||||| | || || | | |||||
Sbjct 97280 GTGAACGTTGAGACCAATGCCTCCAGCGTTCTTGGAGATCATAGCACAAGTCTTGAGAGT 97221
Query 131971 GTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGCAAGAGGACAACTG 132030
|| |||||||| || | |||||| | ||||| || || ||||| |||| | |||
Sbjct 97220 GTCGTAGATACCCTCAATGCTGTCGTCCTTCATGTCAACCAAGAAGCATGAGGCGAGCTG 97161
Query 132031 T 132031
|
Sbjct 97160 T 97160
>seq1001
Length=158095
Score = 89.7 bits (98), Expect = 4e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116
|| || || || ||||||||||||| | || |||| || ||||| || || ||| |
Sbjct 24597 TCCTTCTGGATGTTGTAGTCGCTCAATGTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAAG 24656
Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176
||||| ||||| || || || || | ||||| || || ||||| || | |
Sbjct 24657 ATGAGGCGCTGCTGGTCTGGTGGGATGCCCTCCTTGTCTTGAATCTTCGACTTGACATTG 24716
Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236
|| | ||||||| | ||| |||||||| || |||| ||||| || || || || ||
Sbjct 24717 TCGATGGTGTCTGAAGATTCCACTTCTAGTGTGATAGTCTTGCCGGTAAGTGTCTTGACG 24776
Query 27237 AAGATTTGCATA 27248
||||||||||||
Sbjct 24777 AAGATTTGCATA 24788
Score = 86.0 bits (94), Expect = 5e-12
Identities = 124/175 (71%), Gaps = 0/175 (0%)
Strand=Plus/Plus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
|| || || || ||||| |||||||| | |||| | || ||||| || || |||
Sbjct 25047 GTGGACTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCCTCGAGTTGCTTGCCG 25106
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
||| ||||||||||||| |||||||| || | || || || || ||||||| | |||
Sbjct 25107 GCGAAAATGAGACGCTGCTGATCCGGAGGAATTCCTTCCTTGTCCTGGATCTTGCTCTTC 25166
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCA 27225
| | || | |||||| | || ||||| || || || || | ||||| ||||
Sbjct 25167 ACATTGTCGATAGTGTCGGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTCA 25221
Score = 82.4 bits (90), Expect = 6e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
|| || || || || || ||||||||| || | | || |||| |||||||| || ||
Sbjct 24819 GTGGACTCCTTCTGGATGTTGTAGTCGGACAAGGTCCGGCCGTCCTCGAGCTGCTTGCCA 24878
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
||| | || | ||||| || || || || | |||||| || || ||||||| ||
Sbjct 24879 GCGAAGATCAAGCGCTGCTGGTCTGGTGGAATACCCTCCTTGTCTTGGATCTTGGACTTG 24938
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | || | |||||| | | ||||| || || || |||| || || || || ||
Sbjct 24939 ACATTGTCAATAGTGTCGGAAGACTCAACCTCGAGGGTGATAGTCTTTCCAGTGAGCGTC 24998
Query 27231 TTCACAAAGATTTGCATA 27248
|| || ||||||||||||
Sbjct 24999 TTGACGAAGATTTGCATA 25016
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424917149124072
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |