Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1779 161 1e-34 >seq1779 Length=148467 Score = 161 bits (178), Expect = 1e-34 Identities = 881/1390 (63%), Gaps = 23/1390 (2%) Strand=Plus/Minus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||||||||| | |||||||| || ||||| || || |||| ||| || | ||||| Sbjct 98399 GTAGATGTTGCTAGTGTATGGCTCGAAGCACTCGTTGAAGCCCATGATCTGGGAAGTGGA 98340 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826 || || |||||||| |||| | ||| ||| || | ||| | |||| ||| | | Sbjct 98339 AGCAGTCGGCATTGGAGCCACGAGAAGGGAGTTTCGCACACCGTGCTCCGCGATCCTGGC 98280 Query 110827 CTTGAGAACATCCCAGTCGTAGTTGAGC--TTGGTTTCACCTTCCCACATGTCAAACTGA 110884 ||||||| || |||| || || || | |||| | || ||||||| || | ||| Sbjct 98279 CTTGAGAGCAGCCCAATCCCAGA-GATCAGTTGGAGTGACAC-CCCACATATCGTATTGA 98222 Query 110885 AG--CACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAG 110942 || ||||| ||| || | || || || || |||| || || | || | |||| Sbjct 98221 AGTTCACCCTTTG--ACACTGGTGAGCCTTCGTAGGTCTCGTATGGGCCAAGCTTCTCAG 98164 Query 110943 CCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA 111002 ||| |||||| ||| || || ||||| || ||||||||||| || | ||| | Sbjct 98163 CCAGCTCACAGGACGCAGTCAAGGCGGCGTGGTAGATGGTTTCAAAAATCTGGATATTGA 98104 Query 111003 TCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGAC 111062 | |||||| || || || | ||| || || |||| || |||| Sbjct 98103 GCCGGCGCGCTTCAGGAGAGTCGAAGGGCATGCGAAGAGCAAGGAAGGCATCAGCAAGAC 98044 Query 111063 CTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-ACG 111121 | || ||||| | ||| || || | ||| || | || ||||| ||| ||| || Sbjct 98043 CCTGGACACCAAGACCGATGGGGCGGTGACGGAAGTTGCTCTTTCTCGCC-TCTGGCACT 97985 Query 111122 GGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCA 111181 || || || | || ||| ||| | ||| ||||| || | || | |||| Sbjct 97984 GGGTAGTGGTTGATCTCGATGGTCTTGTTCAAATTCTTGGTGACCACCTGAACCACTTCA 97925 Query 111182 TGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATT 111241 ||||| || | | || | | | |||| | ||| || |||| || ||||| Sbjct 97924 TGAAGCTTCTTGAAGTCGTAGATCTCATTCTCAATGTCGACGTATGTTGGCAGAGCGATC 97865 Query 111242 GATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACAT 111301 || || | ||||| |||||| |||||| | | | |||||| | || || || || Sbjct 97864 GAAGCAAGGTTGCAGACAGCCACCTCATCTGGAGCAGAGTACTCGATGATCTCAGTGCAG 97805 Query 111302 AAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCC 111361 | ||| ||||| || || || | ||||| ||||| ||||| |||||| |||||| Sbjct 97804 AGGTTAGAACTGCGGATTGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCC 97745 Query 111362 TTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AAC 111420 ||||| || ||| | || || ||||||||||| | | ||||| || | ||| | | Sbjct 97744 TTGTAAAGGATGAAAGGGCCGCCGGTCTCCGTCTGAGCCTCAAGAATGGCATACCAGATC 97685 Query 111421 ATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGC 111480 || | ||| | ||| | || | | || |||||| |||||||| |||||| Sbjct 97684 TTCTG-GGCGCGAACAGTCTCGCGGCCACGACCCTCCTTCTCGTACTGCTCGTAGAGCTT 97626 Query 111481 TTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGA 111540 || || ||||| || | || | |||||| || || | || || | || | Sbjct 97625 CTCGAAGTCCTCGCCATAAACATCTGCGAGACCAGGGCACTCATTCGGGCACATGAGGGT 97566 Query 111541 CCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAA 111600 ||| | || |||||||| ||||||||||| || || || ||||| || | | || Sbjct 97565 CCACTCGCCGTTCTCCTCAACACGCTTCATGAACAGATCCGGGATCCAAAGTGCGAAGAA 97506 Query 111601 GAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCAT 111660 || || | || |||| || | || ||||| || | || | ||| ||| Sbjct 97505 AAGGTCGCGGGCGCGCACCTCCTCTTTGCCATGGTTCTTGCGGAGATCCATGAATGCCAG 97446 Query 111661 GATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAG 111716 | ||| |||||||||||||| || || | || | | || | | | | ||| Sbjct 97445 AACATCAGCGTGCCATGGCTCGAGGTAAATGGCAAAGGCACCGGGGCGCTTGTTG-CCAC 97387 Query 111717 CTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTG 111776 | || | || ||||| || ||| ||| | || || ||||| |||| | || | | Sbjct 97386 CCTGGTCAACGTAGCGAGCAGTGTTGTTGTAGACACGCAGCATAGGAACCAGTCCGTTGG 97327 Query 111777 ATTGACCATTTGT-CCCCCGA-ATACGAGATTTATTGGCTCTCACATCATGGATGTGCAT 111834 | || || || || |||| |||||| | | || | | || | || | Sbjct 97326 ACGTGCCGTTCGTGCCTCCGATGTACGAG--CCAGTCGCACGGATGCGGTGAACGTTGAG 97269 Query 111835 CCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACC 111894 ||||| || ||||| ||| ||||| ||||| | | ||||| | |||||||| Sbjct 97268 ACCAATGCCTCCAGCGTTCTTGGAGATCATAGCACAAGTCTTGAGAGTGTCGTAGATACC 97209 Query 111895 GTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGT 111954 | || ||| ||||| || | | | |||||| || | ||| | | || || Sbjct 97208 CTCAATGCTGTCGTCCTTCATGTCAACCAAGAAGCATGAGGCGAGCTGTGCATTAGGCGT 97149 Query 111955 ACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGT 112013 |||||| | || || || || | ||||| |||| ||| | | |||||| | || || Sbjct 97148 ACCAGCGCTAAAAAGCGTGGGCGACGCGTGTGTGAA-GTACTTGTTGGACATGTAGTTGT 97090 Query 112014 ATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACA 112073 | ||||| | ||| |||||||| || |||||||| || | || || ||||||| || Sbjct 97089 AGGTCTCAATAGCAGCCTCAATGTCCTCGCCGTGGATACCAACAGCCACACGCATGATCA 97030 Query 112074 TGTACTGTGG 112083 | | ||| || Sbjct 97029 TTTGCTGCGG 97020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628005850317600