Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq435 132 1e-25
seq1001 127 6e-24
>seq435
Length=71824
Score = 132 bits (146), Expect = 1e-25
Identities = 233/339 (69%), Gaps = 3/339 (1%)
Strand=Plus/Plus
Query 349562 AAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACT 349621
||||||||||| | || || | ||| | ||||| | || | || ||| | |||
Sbjct 37666 AAAATGAAGGAGGTCGCCGAGTCTTATCTTGGTGAGAAGGTCCACAACGCAGTTGTCACT 37725
Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681
|| || ||||| || || || || ||||| |||| || || |||||||| | || ||
Sbjct 37726 GTTCCTGCCTACTTCAACGACGCTCAGCGCGCTGCCACCAAGGATGCTGGTACTATCGCA 37785
Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTT 349741
|| | ||||| || || | |||||||||| ||||| || || | || || || ||
Sbjct 37786 GGCCTCAATGTGCTGCGAGTCGTTAATGAACCTACTGCCGCCGCTCTCGCCTACGGTCTC 37845
Query 349742 GATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTT 349801
|| || || |||| | ||| | || | | | ||| | |||||||||||||||
Sbjct 37846 GACAA---GACTGACAAGGAACGCCAGATCATAGTCTACGATCTTGGTGGTGGTACTTTT 37902
Query 349802 GATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGAT 349861
||||| || | || || |||| | || | || || || | || || ||||||||
Sbjct 37903 GATGTCTCCATCCTGACCGTTGACCAAGGTGTCTTCGAGGTCCAGGCTACCGCTGGTGAC 37962
Query 349862 ACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTT 349900
|| ||||||||||| |||||||| ||| | ||| | |||
Sbjct 37963 ACCCATCTTGGTGGTGAAGATTTCGATCAGCGTGTTGTT 38001
>seq1001
Length=158095
Score = 127 bits (140), Expect = 6e-24
Identities = 157/212 (74%), Gaps = 2/212 (1%)
Strand=Plus/Plus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| ||||||||| || | | || ||||| || || || ||||| || ||||| || |
Sbjct 25009 TTTGCATACCACCGCGCAGGCGGAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGT 25068
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| ||||| | || || ||||| || ||||| || || || || || ||||| |||||||
Sbjct 25069 AGTCAGAGAGAGTGCGGCCATCCTCGAGTTGCTTGCCGGCGAAAATGAGACGCTGCTGAT 25128
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGAT 140681
| |||||||||||||| || ||||| || || ||| || ||||| || || | || ||
Sbjct 25129 CCGGAGGAATTCCTTCCTTGTCCTGGATCTT-GCTCTTCACATTGTCGATAGTGTCGGAG 25187
Query 140682 GGTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713
| ||||| || || || | ||||| |||||
Sbjct 25188 GACTCAACCTCGAGGGTGATGGTCTTGCCGGT 25219
Score = 118 bits (130), Expect = 3e-21
Identities = 167/235 (71%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||||||||| | | || ||||| || ||||| ||||| || || || || |
Sbjct 24781 TTTGCATACCACCACGGAGACGAAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGT 24840
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || || || || || || || || || || || ||||| ||||| | || ||||| |
Sbjct 24841 AGTCGGACAAGGTCCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGT 24900
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| || ||||| || || || || || || || | || ||||| ||||| | || || |
Sbjct 24901 CTGGTGGAATACCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCGGAAG 24960
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||||| || || || | |||||||| || || || || || || || |||||
Sbjct 24961 ACTCAACCTCGAGGGTGATAGTCTTTCCAGTGAGCGTCTTGACGAAGATTTGCAT 25015
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515189731309793
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |