Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq1779 235 6e-57 seq2619 116 4e-21 >seq1779 Length=148467 Score = 235 bits (260), Expect = 6e-57 Identities = 411/592 (69%), Gaps = 6/592 (1%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTAC 53251 ||||||| || || | ||||||||||| || ||| | | || || |||||| ||| Sbjct 97033 TCATGCGTGTGGCTGTTGGTATCCACGGCGAGGACATTGAGGC-TGCTATTGAGACCTAC 97091 Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311 ||| ||| | | |||||||| || ||||| |||| || || || | |||||||||| Sbjct 97092 AACTACATGTCCAACAAGTACTTCACACACGCGTCGCCCACGCTTTTTAGCGCTGGTACG 97151 Query 53312 AATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371 | | | ||| | | |||||| |||| | |||||||| ||| || || || Sbjct 97152 CCTAATGCACAGCTCGCCTCATGCTTCTTGGTTGACATGAAGGACGACAGCATTGAGGGT 97211 Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC 53431 |||||||| || |||||| ||||| ||||||||| | || || || ||| || Sbjct 97212 ATCTACGACACTCTCAAGACTTGTGCTATGATCTCCAAGAACGCTGGAGGCATTGGTCTC 97271 Query 53432 CACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCG 53489 || | || | || ||||||||| ||| | ||| || ||||||||| || Sbjct 97272 AAC-GTTC-ACCGCATCCGTGCGACTGGCTCGTACATCGGAGGCACGAACGGCACGTCCA 97329 Query 53490 ATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTG 53549 | ||| | || |||||||| || |||| ||||||||| || || ||||| ||||||||| Sbjct 97330 ACGGACTGGTTCCTATGCTGCGTGTCTACAACAACACTGCTCGCTACGTTGACCAGGGTG 97389 Query 53550 GTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGG 53609 | |||||| || | || ||||| ||||||||||| |||||||| || || ||| Sbjct 97390 GCAACAAGCGCCCCGGTGCCTTTGCCATTTACCTCGAGCCATGGCACGCTGATGTTCTGG 97449 Query 53610 AGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTA 53669 || | || || || ||| || || | || ||| ||||| ||| ||||| || Sbjct 97450 CATTCATGGATCTCCGCAAGAACCATGGCAAAGAGGAGGTGCGCGCCCGCGACCTTTTCT 97509 Query 53670 CAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACC 53729 || || ||||| ||||| || |||||| | || ||| || ||| |||||| || Sbjct 97510 TCGCACTTTGGATCCCGGATCTGTTCATGAAGCGTGTTGAGGAGAACGGCGAGTGGACCC 97569 Query 53730 TGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTT 53781 | ||||||||||| |||||||| || ||| | ||| || || ||||| || Sbjct 97570 TCATGTGCCCGAATGAGTGCCCTGGTCTCGCAGATGTTTATGGCGAGGACTT 97621 Score = 93.3 bits (102), Expect = 5e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543 || |||||||| |||||||| |||||||| || || || || | |||||||||||| | Sbjct 98304 CGAAACTCCCTTCTCGTGGCTCCAATGCCGACTGCTTCCACTTCCCAGATCATGGGCTTC 98363 Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCG 55587 |||||| |||||||| ||||| | |||||||||| ||||| Sbjct 98364 AACGAGTGCTTCGAGCCATACACTAGCAACATCTACTCTCGCCG 98407 >seq2619 Length=45072 Score = 116 bits (128), Expect = 4e-21 Identities = 325/492 (66%), Gaps = 14/492 (3%) Strand=Plus/Minus Query 74784 ATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATG 74843 |||||||||||||| || | ||| || ||||| || ||||||||||||||||| |||||| Sbjct 29704 ATCAATTCATTCGAGAATGTAAGACCGGGCATGAGGCCACGCTTCTTCAACCAGAAGATG 29645 Query 74844 GCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGC 74903 | ||| |||||| |||||||||||| ||||| || ||||||| | || Sbjct 29644 GATGCGAAAGAACCAGAGAAGAAGATGCCCTCGACGGCAGCGAAGGCGATCAATCGGCAG 29585 Query 74904 GCGAACG----GTGCATCGGAAGTCATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGAC 74959 || || | || | | | || ||||| | ||||| ||||| ||| | | Sbjct 29584 GCAAAAGTCGAGTTC-TTGTCAGAGATCCATCGCAATGCCCAGTCAGC-CTTCTTACGGA 29527 Query 74960 CGCA-GGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGA 75018 || |||| | ||||| || | |||||| || || | ||| || ||| | Sbjct 29526 TACATGGGATGTTGTCGATGGCGTTGAAGAGATATGATCGCTGCTTGGGTTCGCTGATGT 29467 Query 75019 GCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACG 75078 |||| || | || ||||| || ||||| || || ||| | | |||| | Sbjct 29466 AGGTGTCGATAAGCAGGGAGTATGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAATC 29407 Query 75079 CGTAGAAAGACCGCGCCTCTGCAATCTGTACAT--CCTTTGAAAAATTCATGTCGATATT 75136 ||||||| | || || || | |||||||| | || |||| ||| | | || Sbjct 29406 CGTAGAAGCATCGTGCTTCGGGTATCTGTACTTCACCGCTGAAGCGCTCA--ACCAGGTT 29349 Query 75137 CTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCG 75196 ||| |||| || ||||| || |||||||| ||||| || || | ||| |||| || Sbjct 29348 CTCATTGACAATTCCGTCAGATGCGGCGAAGAAAGCAAGGACATGTGAGATGAAGTATCG 29289 Query 75197 CTCATCGTCAGTGAGT---TTGTCCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTC 75253 ||| || || | ||| |||| ||| || | |||||| | || |||||||||||| Sbjct 29288 CTCGTCATCGTTCAGTCTCTTGTTCCAGTCGTGAAGGTCCTTGGACAGATCAATCTCCTC 29229 Query 75254 GACCGTCCAGAA 75265 | |||||||| Sbjct 29228 AGCGGTCCAGAA 29217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547193215293800