Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq1779 235 6e-57
seq2619 116 4e-21
>seq1779
Length=148467
Score = 235 bits (260), Expect = 6e-57
Identities = 411/592 (69%), Gaps = 6/592 (1%)
Strand=Plus/Plus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTAC 53251
||||||| || || | ||||||||||| || ||| | | || || |||||| |||
Sbjct 97033 TCATGCGTGTGGCTGTTGGTATCCACGGCGAGGACATTGAGGC-TGCTATTGAGACCTAC 97091
Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311
||| ||| | | |||||||| || ||||| |||| || || || | ||||||||||
Sbjct 97092 AACTACATGTCCAACAAGTACTTCACACACGCGTCGCCCACGCTTTTTAGCGCTGGTACG 97151
Query 53312 AATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371
| | | ||| | | |||||| |||| | |||||||| ||| || || ||
Sbjct 97152 CCTAATGCACAGCTCGCCTCATGCTTCTTGGTTGACATGAAGGACGACAGCATTGAGGGT 97211
Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC 53431
|||||||| || |||||| ||||| ||||||||| | || || || ||| ||
Sbjct 97212 ATCTACGACACTCTCAAGACTTGTGCTATGATCTCCAAGAACGCTGGAGGCATTGGTCTC 97271
Query 53432 CACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCG 53489
|| | || | || ||||||||| ||| | ||| || ||||||||| ||
Sbjct 97272 AAC-GTTC-ACCGCATCCGTGCGACTGGCTCGTACATCGGAGGCACGAACGGCACGTCCA 97329
Query 53490 ATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTG 53549
| ||| | || |||||||| || |||| ||||||||| || || ||||| |||||||||
Sbjct 97330 ACGGACTGGTTCCTATGCTGCGTGTCTACAACAACACTGCTCGCTACGTTGACCAGGGTG 97389
Query 53550 GTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGG 53609
| |||||| || | || ||||| ||||||||||| |||||||| || || |||
Sbjct 97390 GCAACAAGCGCCCCGGTGCCTTTGCCATTTACCTCGAGCCATGGCACGCTGATGTTCTGG 97449
Query 53610 AGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTA 53669
|| | || || || ||| || || | || ||| ||||| ||| ||||| ||
Sbjct 97450 CATTCATGGATCTCCGCAAGAACCATGGCAAAGAGGAGGTGCGCGCCCGCGACCTTTTCT 97509
Query 53670 CAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACC 53729
|| || ||||| ||||| || |||||| | || ||| || ||| |||||| ||
Sbjct 97510 TCGCACTTTGGATCCCGGATCTGTTCATGAAGCGTGTTGAGGAGAACGGCGAGTGGACCC 97569
Query 53730 TGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTT 53781
| ||||||||||| |||||||| || ||| | ||| || || ||||| ||
Sbjct 97570 TCATGTGCCCGAATGAGTGCCCTGGTCTCGCAGATGTTTATGGCGAGGACTT 97621
Score = 93.3 bits (102), Expect = 5e-14
Identities = 83/104 (80%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543
|| |||||||| |||||||| |||||||| || || || || | |||||||||||| |
Sbjct 98304 CGAAACTCCCTTCTCGTGGCTCCAATGCCGACTGCTTCCACTTCCCAGATCATGGGCTTC 98363
Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCG 55587
|||||| |||||||| ||||| | |||||||||| |||||
Sbjct 98364 AACGAGTGCTTCGAGCCATACACTAGCAACATCTACTCTCGCCG 98407
>seq2619
Length=45072
Score = 116 bits (128), Expect = 4e-21
Identities = 325/492 (66%), Gaps = 14/492 (3%)
Strand=Plus/Minus
Query 74784 ATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATG 74843
|||||||||||||| || | ||| || ||||| || ||||||||||||||||| ||||||
Sbjct 29704 ATCAATTCATTCGAGAATGTAAGACCGGGCATGAGGCCACGCTTCTTCAACCAGAAGATG 29645
Query 74844 GCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGC 74903
| ||| |||||| |||||||||||| ||||| || ||||||| | ||
Sbjct 29644 GATGCGAAAGAACCAGAGAAGAAGATGCCCTCGACGGCAGCGAAGGCGATCAATCGGCAG 29585
Query 74904 GCGAACG----GTGCATCGGAAGTCATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGAC 74959
|| || | || | | | || ||||| | ||||| ||||| ||| | |
Sbjct 29584 GCAAAAGTCGAGTTC-TTGTCAGAGATCCATCGCAATGCCCAGTCAGC-CTTCTTACGGA 29527
Query 74960 CGCA-GGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGA 75018
|| |||| | ||||| || | |||||| || || | ||| || ||| |
Sbjct 29526 TACATGGGATGTTGTCGATGGCGTTGAAGAGATATGATCGCTGCTTGGGTTCGCTGATGT 29467
Query 75019 GCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACG 75078
|||| || | || ||||| || ||||| || || ||| | | |||| |
Sbjct 29466 AGGTGTCGATAAGCAGGGAGTATGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAATC 29407
Query 75079 CGTAGAAAGACCGCGCCTCTGCAATCTGTACAT--CCTTTGAAAAATTCATGTCGATATT 75136
||||||| | || || || | |||||||| | || |||| ||| | | ||
Sbjct 29406 CGTAGAAGCATCGTGCTTCGGGTATCTGTACTTCACCGCTGAAGCGCTCA--ACCAGGTT 29349
Query 75137 CTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCG 75196
||| |||| || ||||| || |||||||| ||||| || || | ||| |||| ||
Sbjct 29348 CTCATTGACAATTCCGTCAGATGCGGCGAAGAAAGCAAGGACATGTGAGATGAAGTATCG 29289
Query 75197 CTCATCGTCAGTGAGT---TTGTCCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTC 75253
||| || || | ||| |||| ||| || | |||||| | || ||||||||||||
Sbjct 29288 CTCGTCATCGTTCAGTCTCTTGTTCCAGTCGTGAAGGTCCTTGGACAGATCAATCTCCTC 29229
Query 75254 GACCGTCCAGAA 75265
| ||||||||
Sbjct 29228 AGCGGTCCAGAA 29217
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547193215293800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |