Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq1779 215 6e-51 seq1001 176 5e-39 seq224 140 4e-28 seq2223 102 9e-17 >seq1779 Length=148467 Score = 215 bits (238), Expect = 6e-51 Identities = 802/1238 (65%), Gaps = 43/1238 (3%) Strand=Plus/Minus Query 80538 ACCCCACATGTCGTGCTGCAAGATG-CCCTCCGACGCCGGAGACCCCGCGAACGTCTCGT 80596 ||||||||| |||| || ||| | |||| ||| | || || || || | ||||||| Sbjct 98240 ACCCCACATATCGTATTG-AAGTTCACCCTTTGACACTGGTGAGCCTTCGTAGGTCTCGT 98182 Query 80597 ACGGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACT 80656 | ||||| | ||| ||||||||||| ||| | | | ||| ||||| || ||| | Sbjct 98181 ATGGGCCAAGCTTCTCAGCCAGCTCACAGGACGCAGTCAAGGCGGCGTGGTAGATGGTTT 98122 Query 80657 CAAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCA 80716 |||| | | || | | |||||| | || |||||| | || || | | Sbjct 98121 CAAAAATCTGGATATTGAGCCGGCGCGCTTCAGGAGAGTCGAAGGGCATGCGAAGAGCAA 98062 Query 80717 TGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATC 80776 ||| | ||||| || ||||| || || | |||| |||||||| || ||| | || Sbjct 98061 GGAAGGCATCAGCAAGACCCTGGACACCAAGACCGATGGGGCGGTGACGGAAGTT-GCTC 98003 Query 80777 GCTCG-GCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTA 80835 || ||||| || | |||||| ||| | |||||| ||||| || || Sbjct 98002 TTTCTCGCCTCTGGCACTGGGTAGTGGTTGATCTCGATGGTCTTGTTCAAATTCTTGGTG 97943 Query 80836 ACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCCCTTCACAA----- 80890 || ||| | || |||||||| |||| |||||| | | || | ||| ||| Sbjct 97942 ACCACCTGAACCACTTCATGAAGCTTCTTGAAGTCGTA---GATCTCATTCTCAATGTCG 97886 Query 80891 ----ATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTA 80946 ||| || || | || || || ||||| || |||||||| || | | | | Sbjct 97885 ACGTATGTTGGCAGAGCGATCGAAGCAAGGTTGCAGACAGCCACCTCATCTGGAGCAGAG 97826 Query 80947 AACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTT 81006 |||||| ||| || ||||| | |||||| |||||||| ||||| |||||||| Sbjct 97825 TACTCGATGATCTCAGTGCAGAGGTTAGAACTGCGGATTGTACCAAGGTTCTTCTGGTTG 97766 Query 81007 GACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGAC 81066 |||| ||||||||| |||||||| ||| | ||| |||||||| ||| | | Sbjct 97765 CTCTTGCGGTTGCAAGCATCCTTGTAAAGGATGAAAGGGCCGCCGGTCTCCGTCTGAGCC 97706 Query 81067 TTGAGGATGGCGTCCCAAATCTC--GCGCGCCTTGACCAC-CTTGCGGAATTTGCCTTCG 81123 | || ||||| | ||| |||| | |||| || || || |||| || || Sbjct 97705 TCAAGAATGGCATACCAGATCTTCTGGGCGC---GAACAGTCTCGCGGCCACGACCCTCC 97649 Query 81124 GCCACATACTTGGCGTA-AGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGG 81182 | | |||| |||| |||||| ||||| | | || | || || | ||| | || Sbjct 97648 TTCTCGTACTGCTCGTAGAGCTTC-TCGAAGTCCTCGCCATAAACATCTGCGAGACCAGG 97590 Query 81183 GCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGC 81242 |||||| || |||||||| ||| ||| ||| || | ||| ||| ||||||||| Sbjct 97589 GCACTCATTCGGGCACATGAGGGTCCACTCGCCGTTCTCCTCAACACGCTTCATGAACAG 97530 Query 81243 GTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTT 81302 || |||||||| || ||| ||| ||||||||| |||| ||||||| | || ||||| Sbjct 97529 ATCCGGGATCCAAAGTGCGAAGAAAAGGTCGCGGGCGCGCACCTCCTCTTTGCCATGGTT 97470 Query 81303 GAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGAT 81362 ||| | || | || ||| | || || ||||||||||| || || | ||| | Sbjct 97469 CTTGCGGAGATCCATGAATGCCAGAACATCAGCGTGCCATGGCTCGAGGTAAATGGCAAA 97410 Query 81363 CGACCCCTTGCG---ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACG 81419 | || ||| ||||||||||| ||||| || ||||| ||| | ||||| Sbjct 97409 GGCACCGGGGCGCTTGTTGCCACCCTGGTCAACGTAGCGAGCAGTGTTGTTGTAGACACG 97350 Query 81420 CAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGC 81479 || |||||| | | || | ||| |||||||| || |||| ||| || | || Sbjct 97349 CAGCATAGGAACCAGTCCGTTGGACGTGCCGTTCGTGCCTCCGATGTACGAGCCAGTCGC 97290 Query 81480 GCGCACCTTGC--TGA---TTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCA 81534 || | ||| ||| ||| ||||| ||||| || | ||| || ||| |||| Sbjct 97289 ACGGA---TGCGGTGAACGTTG--AGACCAATGCCTCCAGCGTTCTTGGAGATCATAGCA 97235 Query 81535 CACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAA 81594 || || | || || || || ||||| ||||| || | |||||||||| |||||| Sbjct 97234 CAAGTCTTGAGAGTGTCGTAGATACCCTCAATGCTGTCGTCCTTCATGTCAACCAAGAAG 97175 Query 81595 CAGCTTGACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAA 81652 || | | || | || || | | || || | || || || || | |||||| Sbjct 97174 CATGAGGCGAGCT--GTGCATTAGGCGTACCAGCGCTAAAAAGCGTGGGCGACGCGTGTG 97117 Query 81653 TGAAATAACGGTTTGACATCAGGTCATAGGTTTC-CTTGACGCGTGGAATATCGTCACCG 81711 |||| || ||| ||||| || ||||| || | | || | ||| || || ||| Sbjct 97116 TGAAGTACTTGTTGGACATGTAGTTGTAGGTCTCAATAGCAGCCT-CAATGTCCTCGCCG 97058 Query 81712 TGAATACCGATAGCTACACGCATAAACATGTACTGGGG 81749 || ||||| | ||| |||||||| | ||| | ||| || Sbjct 97057 TGGATACCAACAGCCACACGCATGATCATTTGCTGCGG 97020 >seq1001 Length=158095 Score = 176 bits (194), Expect = 5e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| ||||||||||| || || |||||||| || || ||||||||||| Sbjct 25015 ATGCAAATCTTCGTCAAGACGCTCACTGGAAAGACTATCACCCTCGAGGTTGAGTCTTCC 24956 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | ||| | || || || ||||||||||| ||||| ||||||||| Sbjct 24955 GACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAGGGTATTCCACCAGACCAG 24896 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | || || ||||| ||||| |||||||| | || ||| | | ||||| || Sbjct 24895 CAGCGCTTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGGACCTTGTCCGACTACAAC 24836 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| |||||||| || || ||| | ||||| || ||||| Sbjct 24835 ATCCAGAAGGAGTCCACTCTCCACCTTGTCCTTCGTCTCCGTGGTGG 24789 Score = 150 bits (166), Expect = 2e-31 Identities = 155/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||||||||| || || || ||||||||||| || | || | ||| ||||| Sbjct 25219 ACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGACACTATCGACAATGTGAAGAGC 25160 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || ||||||||||| ||||||||||| || ||||||||||| ||||| || || ||| Sbjct 25159 AAGATCCAGGACAAGGAAGGAATTCCTCCGGATCAGCAGCGTCTCATTTTCGCCGGCAAG 25100 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 ||||||||||||| || || || | ||||| || | || ||||| ||||| || || Sbjct 25099 CAACTCGAGGATGGCCGCACTCTCTCTGACTACAACATTCAGAAGGAGTCCACCCTCCAC 25040 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || ||| | || || |||||||| Sbjct 25039 CTTGTCCTCCGCCTGCGCGGTGG 25017 Score = 149 bits (164), Expect = 7e-31 Identities = 172/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| ||||||||||||||||| || || || || || || Sbjct 24787 ATGCAAATCTTCGTCAAGACACTTACCGGCAAGACTATCACACTAGAAGTGGAATCTTCA 24728 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||| | || ||||| ||||||||||| || || ||||||||| Sbjct 24727 GACACCATCGACAATGTCAAGTCGAAGATTCAAGACAAGGAGGGCATCCCACCAGACCAG 24668 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| || || || ||||| ||||| || ||||| | || || | ||| ||||| || Sbjct 24667 CAGCGCCTCATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGGACATTGAGC-GACTACAA 24609 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 |||| ||||| |||||| || | || | ||||| || |||||| Sbjct 24608 CATCCAGAAGGAGAGCACTCTGCACTTGGTGCTCCGTCTGCGTGGTGGA 24560 >seq224 Length=177688 Score = 140 bits (154), Expect = 4e-28 Identities = 140/182 (77%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| |||||||| || || |||||||| || || |||||||| ||||| || | ||| Sbjct 19222 CTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCAT 19163 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | ||| | ||| || ||||||||||||||||||||||| || |||||||||||||| Sbjct 19162 CGATAATGTCAAGAGCAAGATTCAGGACAAGGAGGGAATTCCACCGGACCAGCAGCGTCT 19103 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 || || ||||| |||||| | ||||||| || || | | ||||| || ||||||| Sbjct 19102 GATCTTCGCTGGAAAGCAATTGGAGGATGGCCGCACTTTGTCTGACTACAACATCCAAAA 19043 Query 27594 GG 27595 || Sbjct 19042 GG 19041 >seq2223 Length=225719 Score = 102 bits (112), Expect = 9e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 ||||||||||||||||| || ||||||||||| | || || || || ||||| |||||| Sbjct 207863 GACAAGGAGGGAATTCCACCGGACCAGCAGCGCTTGATCTTCGCCGGAAAGCAGCTCGAG 207922 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 |||| || || || | ||||| || |||| ||||| ||||| || || || ||| | Sbjct 207923 GATGGCCGCACTCTCTCGGACTACAACATCCAGAAGGAGTCCACCCTCCACCTGGTCCTC 207982 Query 27619 CGTCTTCGCGGTGG 27632 || || || ||||| Sbjct 207983 CGCCTGCGTGGTGG 207996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570286653700720