Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq1779 215 6e-51
seq1001 176 5e-39
seq224 140 4e-28
seq2223 102 9e-17
>seq1779
Length=148467
Score = 215 bits (238), Expect = 6e-51
Identities = 802/1238 (65%), Gaps = 43/1238 (3%)
Strand=Plus/Minus
Query 80538 ACCCCACATGTCGTGCTGCAAGATG-CCCTCCGACGCCGGAGACCCCGCGAACGTCTCGT 80596
||||||||| |||| || ||| | |||| ||| | || || || || | |||||||
Sbjct 98240 ACCCCACATATCGTATTG-AAGTTCACCCTTTGACACTGGTGAGCCTTCGTAGGTCTCGT 98182
Query 80597 ACGGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACT 80656
| ||||| | ||| ||||||||||| ||| | | | ||| ||||| || ||| |
Sbjct 98181 ATGGGCCAAGCTTCTCAGCCAGCTCACAGGACGCAGTCAAGGCGGCGTGGTAGATGGTTT 98122
Query 80657 CAAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCA 80716
|||| | | || | | |||||| | || |||||| | || || | |
Sbjct 98121 CAAAAATCTGGATATTGAGCCGGCGCGCTTCAGGAGAGTCGAAGGGCATGCGAAGAGCAA 98062
Query 80717 TGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATC 80776
||| | ||||| || ||||| || || | |||| |||||||| || ||| | ||
Sbjct 98061 GGAAGGCATCAGCAAGACCCTGGACACCAAGACCGATGGGGCGGTGACGGAAGTT-GCTC 98003
Query 80777 GCTCG-GCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTA 80835
|| ||||| || | |||||| ||| | |||||| ||||| || ||
Sbjct 98002 TTTCTCGCCTCTGGCACTGGGTAGTGGTTGATCTCGATGGTCTTGTTCAAATTCTTGGTG 97943
Query 80836 ACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCCCTTCACAA----- 80890
|| ||| | || |||||||| |||| |||||| | | || | ||| |||
Sbjct 97942 ACCACCTGAACCACTTCATGAAGCTTCTTGAAGTCGTA---GATCTCATTCTCAATGTCG 97886
Query 80891 ----ATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTA 80946
||| || || | || || || ||||| || |||||||| || | | | |
Sbjct 97885 ACGTATGTTGGCAGAGCGATCGAAGCAAGGTTGCAGACAGCCACCTCATCTGGAGCAGAG 97826
Query 80947 AACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTT 81006
|||||| ||| || ||||| | |||||| |||||||| ||||| ||||||||
Sbjct 97825 TACTCGATGATCTCAGTGCAGAGGTTAGAACTGCGGATTGTACCAAGGTTCTTCTGGTTG 97766
Query 81007 GACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGAC 81066
|||| ||||||||| |||||||| ||| | ||| |||||||| ||| | |
Sbjct 97765 CTCTTGCGGTTGCAAGCATCCTTGTAAAGGATGAAAGGGCCGCCGGTCTCCGTCTGAGCC 97706
Query 81067 TTGAGGATGGCGTCCCAAATCTC--GCGCGCCTTGACCAC-CTTGCGGAATTTGCCTTCG 81123
| || ||||| | ||| |||| | |||| || || || |||| || ||
Sbjct 97705 TCAAGAATGGCATACCAGATCTTCTGGGCGC---GAACAGTCTCGCGGCCACGACCCTCC 97649
Query 81124 GCCACATACTTGGCGTA-AGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGG 81182
| | |||| |||| |||||| ||||| | | || | || || | ||| | ||
Sbjct 97648 TTCTCGTACTGCTCGTAGAGCTTC-TCGAAGTCCTCGCCATAAACATCTGCGAGACCAGG 97590
Query 81183 GCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGC 81242
|||||| || |||||||| ||| ||| ||| || | ||| ||| |||||||||
Sbjct 97589 GCACTCATTCGGGCACATGAGGGTCCACTCGCCGTTCTCCTCAACACGCTTCATGAACAG 97530
Query 81243 GTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTT 81302
|| |||||||| || ||| ||| ||||||||| |||| ||||||| | || |||||
Sbjct 97529 ATCCGGGATCCAAAGTGCGAAGAAAAGGTCGCGGGCGCGCACCTCCTCTTTGCCATGGTT 97470
Query 81303 GAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGAT 81362
||| | || | || ||| | || || ||||||||||| || || | ||| |
Sbjct 97469 CTTGCGGAGATCCATGAATGCCAGAACATCAGCGTGCCATGGCTCGAGGTAAATGGCAAA 97410
Query 81363 CGACCCCTTGCG---ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACG 81419
| || ||| ||||||||||| ||||| || ||||| ||| | |||||
Sbjct 97409 GGCACCGGGGCGCTTGTTGCCACCCTGGTCAACGTAGCGAGCAGTGTTGTTGTAGACACG 97350
Query 81420 CAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGC 81479
|| |||||| | | || | ||| |||||||| || |||| ||| || | ||
Sbjct 97349 CAGCATAGGAACCAGTCCGTTGGACGTGCCGTTCGTGCCTCCGATGTACGAGCCAGTCGC 97290
Query 81480 GCGCACCTTGC--TGA---TTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCA 81534
|| | ||| ||| ||| ||||| ||||| || | ||| || ||| ||||
Sbjct 97289 ACGGA---TGCGGTGAACGTTG--AGACCAATGCCTCCAGCGTTCTTGGAGATCATAGCA 97235
Query 81535 CACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAA 81594
|| || | || || || || ||||| ||||| || | |||||||||| ||||||
Sbjct 97234 CAAGTCTTGAGAGTGTCGTAGATACCCTCAATGCTGTCGTCCTTCATGTCAACCAAGAAG 97175
Query 81595 CAGCTTGACATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAA 81652
|| | | || | || || | | || || | || || || || | ||||||
Sbjct 97174 CATGAGGCGAGCT--GTGCATTAGGCGTACCAGCGCTAAAAAGCGTGGGCGACGCGTGTG 97117
Query 81653 TGAAATAACGGTTTGACATCAGGTCATAGGTTTC-CTTGACGCGTGGAATATCGTCACCG 81711
|||| || ||| ||||| || ||||| || | | || | ||| || || |||
Sbjct 97116 TGAAGTACTTGTTGGACATGTAGTTGTAGGTCTCAATAGCAGCCT-CAATGTCCTCGCCG 97058
Query 81712 TGAATACCGATAGCTACACGCATAAACATGTACTGGGG 81749
|| ||||| | ||| |||||||| | ||| | ||| ||
Sbjct 97057 TGGATACCAACAGCCACACGCATGATCATTTGCTGCGG 97020
>seq1001
Length=158095
Score = 176 bits (194), Expect = 5e-39
Identities = 175/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| ||||||||||| || || |||||||| || || |||||||||||
Sbjct 25015 ATGCAAATCTTCGTCAAGACGCTCACTGGAAAGACTATCACCCTCGAGGTTGAGTCTTCC 24956
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| | ||| | || || || ||||||||||| ||||| |||||||||
Sbjct 24955 GACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAGGGTATTCCACCAGACCAG 24896
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| | || || ||||| ||||| |||||||| | || ||| | | ||||| ||
Sbjct 24895 CAGCGCTTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGGACCTTGTCCGACTACAAC 24836
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| |||||||| || || ||| | ||||| || |||||
Sbjct 24835 ATCCAGAAGGAGTCCACTCTCCACCTTGTCCTTCGTCTCCGTGGTGG 24789
Score = 150 bits (166), Expect = 2e-31
Identities = 155/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
||||||||||| || || || ||||||||||| || | || | ||| |||||
Sbjct 25219 ACCGGCAAGACCATCACCCTCGAGGTTGAGTCCTCCGACACTATCGACAATGTGAAGAGC 25160
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| || ||||||||||| ||||||||||| || ||||||||||| ||||| || || |||
Sbjct 25159 AAGATCCAGGACAAGGAAGGAATTCCTCCGGATCAGCAGCGTCTCATTTTCGCCGGCAAG 25100
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
||||||||||||| || || || | ||||| || | || ||||| ||||| || ||
Sbjct 25099 CAACTCGAGGATGGCCGCACTCTCTCTGACTACAACATTCAGAAGGAGTCCACCCTCCAC 25040
Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||| | || || ||||||||
Sbjct 25039 CTTGTCCTCCGCCTGCGCGGTGG 25017
Score = 149 bits (164), Expect = 7e-31
Identities = 172/229 (75%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| |||||||| ||||||||||||||||| || || || || || ||
Sbjct 24787 ATGCAAATCTTCGTCAAGACACTTACCGGCAAGACTATCACACTAGAAGTGGAATCTTCA 24728
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| | ||| | || ||||| ||||||||||| || || |||||||||
Sbjct 24727 GACACCATCGACAATGTCAAGTCGAAGATTCAAGACAAGGAGGGCATCCCACCAGACCAG 24668
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584
||||| || || || ||||| ||||| || ||||| | || || | ||| ||||| ||
Sbjct 24667 CAGCGCCTCATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGGACATTGAGC-GACTACAA 24609
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
|||| ||||| |||||| || | || | ||||| || ||||||
Sbjct 24608 CATCCAGAAGGAGAGCACTCTGCACTTGGTGCTCCGTCTGCGTGGTGGA 24560
>seq224
Length=177688
Score = 140 bits (154), Expect = 4e-28
Identities = 140/182 (77%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473
||| |||||||| || || |||||||| || || |||||||| ||||| || | |||
Sbjct 19222 CTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCAT 19163
Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533
| ||| | ||| || ||||||||||||||||||||||| || ||||||||||||||
Sbjct 19162 CGATAATGTCAAGAGCAAGATTCAGGACAAGGAGGGAATTCCACCGGACCAGCAGCGTCT 19103
Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593
|| || ||||| |||||| | ||||||| || || | | ||||| || |||||||
Sbjct 19102 GATCTTCGCTGGAAAGCAATTGGAGGATGGCCGCACTTTGTCTGACTACAACATCCAAAA 19043
Query 27594 GG 27595
||
Sbjct 19042 GG 19041
>seq2223
Length=225719
Score = 102 bits (112), Expect = 9e-17
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558
||||||||||||||||| || ||||||||||| | || || || || ||||| ||||||
Sbjct 207863 GACAAGGAGGGAATTCCACCGGACCAGCAGCGCTTGATCTTCGCCGGAAAGCAGCTCGAG 207922
Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|||| || || || | ||||| || |||| ||||| ||||| || || || ||| |
Sbjct 207923 GATGGCCGCACTCTCTCGGACTACAACATCCAGAAGGAGTCCACCCTCCACCTGGTCCTC 207982
Query 27619 CGTCTTCGCGGTGG 27632
|| || || |||||
Sbjct 207983 CGCCTGCGTGGTGG 207996
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570286653700720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |