Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq1001 89.7 4e-13
>seq1001
Length=158095
Score = 89.7 bits (98), Expect = 4e-13
Identities = 148/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134
|||||| || || |||||||| || || || || || ||| | ||| || |||| ||
Sbjct 24578 CACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAATGTCCGGCCGTCCTC 24637
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTCCA 39193
|||||| ||||| || || || || ||||||||||| |||||| | || ||| |||||
Sbjct 24638 AAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCTGGTGGG-ATGCCCTCCTTGTCTT 24696
Query 39194 TGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253
|| ||| |||| | | | || || || ||||| || | |||||| | |
Sbjct 24697 GAATCTTCGACTTGACATTGTCGATGGTGTCTGAAGATTCCACTTCTAGTGTGATAGTCT 24756
Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
| || || || || || || |||||||||||
Sbjct 24757 TGCCGGTAAGTGTCTTGACGAAGATTTGCAT 24787
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429528161925203
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |