Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq2619 143 4e-29 >seq2619 Length=45072 Score = 143 bits (158), Expect = 4e-29 Identities = 345/521 (66%), Gaps = 6/521 (1%) Strand=Plus/Minus Query 48177 ATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATT 48236 || ||||| || || ||||| ||||||||||| || ||||| || || | ||| || || Sbjct 29704 ATCAATTCATTCGAGAATGTAAGACCGGGCATGAGGCCACGCTTCTTCAACCAGAAGATG 29645 Query 48237 GCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCT 48296 | |||||||| ||||| ||||| ||||| || ||||| || || ||| | | || Sbjct 29644 GATGCGAAAGAACCAGAGAAGAAGATGCCCTCGACGGCAGCGAAGGCGATCAATCGGCAG 29585 Query 48297 CCGTAACTGGCTTCGTTGT---GTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACA 48353 | || | | | |||| ||||| || |||||| ||||||||||| | | Sbjct 29584 GCAAAAGTCGAGTTCTTGTCAGAGATCCATCGCAATGCCCAGTCAGCCTTCTTACGGATA 29525 Query 48354 CAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAA 48413 || || || | || || || || |||||| | | | ||| || | | ||| Sbjct 29524 CATGGGATGTTGTCGATGGCGTTGAAGAGATATGATCGCTGCTTGGGTTCGCTGATGTAG 29465 Query 48414 GTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCG 48473 || || || | || || |||| ||||| || || || || ||||| |||||| Sbjct 29464 GTGTCGATAAGCAGGGAGTATGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAATCCG 29405 Query 48474 TAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCA 48533 || || |||| ||||| | |||||||| || | || || ||| ||| |||||| Sbjct 29404 TAGAAGCATCGTGCTTCGGGTATCTGTACTTCACCGCTGAAGCGCTCAACCAGGTTCTCA 29345 Query 48534 TTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCG 48593 || || ||||| ||| || || || || || | |||||| || || ||| ||| Sbjct 29344 TTGACAATTCCGTCAGATGCGGCGAAGAAAGCAAGGACATGTGAGATGAAGTATCGCTCG 29285 Query 48594 TTGGAAGTCAGT---TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCT 48650 | ||||| || |||||||| | | || || || | ||| | || ||||| Sbjct 29284 TCATCGTTCAGTCTCTTGTTCCAGTCGTGAAGGTCCTTGGACAGATCAATCTCCTCAGCG 29225 Query 48651 GTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691 ||||| || ||||| || || || || ||||| | |||||| Sbjct 29224 GTCCAGAAGGATGCTTCGGCCTTCTTGTACATCTGCCATAT 29184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694639875727840