Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq2619 143 4e-29
>seq2619
Length=45072
Score = 143 bits (158), Expect = 4e-29
Identities = 345/521 (66%), Gaps = 6/521 (1%)
Strand=Plus/Minus
Query 48177 ATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATT 48236
|| ||||| || || ||||| ||||||||||| || ||||| || || | ||| || ||
Sbjct 29704 ATCAATTCATTCGAGAATGTAAGACCGGGCATGAGGCCACGCTTCTTCAACCAGAAGATG 29645
Query 48237 GCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCT 48296
| |||||||| ||||| ||||| ||||| || ||||| || || ||| | | ||
Sbjct 29644 GATGCGAAAGAACCAGAGAAGAAGATGCCCTCGACGGCAGCGAAGGCGATCAATCGGCAG 29585
Query 48297 CCGTAACTGGCTTCGTTGT---GTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACA 48353
| || | | | |||| ||||| || |||||| ||||||||||| | |
Sbjct 29584 GCAAAAGTCGAGTTCTTGTCAGAGATCCATCGCAATGCCCAGTCAGCCTTCTTACGGATA 29525
Query 48354 CAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAA 48413
|| || || | || || || || |||||| | | | ||| || | | |||
Sbjct 29524 CATGGGATGTTGTCGATGGCGTTGAAGAGATATGATCGCTGCTTGGGTTCGCTGATGTAG 29465
Query 48414 GTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCG 48473
|| || || | || || |||| ||||| || || || || ||||| ||||||
Sbjct 29464 GTGTCGATAAGCAGGGAGTATGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAATCCG 29405
Query 48474 TAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCA 48533
|| || |||| ||||| | |||||||| || | || || ||| ||| ||||||
Sbjct 29404 TAGAAGCATCGTGCTTCGGGTATCTGTACTTCACCGCTGAAGCGCTCAACCAGGTTCTCA 29345
Query 48534 TTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCG 48593
|| || ||||| ||| || || || || || | |||||| || || ||| |||
Sbjct 29344 TTGACAATTCCGTCAGATGCGGCGAAGAAAGCAAGGACATGTGAGATGAAGTATCGCTCG 29285
Query 48594 TTGGAAGTCAGT---TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCT 48650
| ||||| || |||||||| | | || || || | ||| | || |||||
Sbjct 29284 TCATCGTTCAGTCTCTTGTTCCAGTCGTGAAGGTCCTTGGACAGATCAATCTCCTCAGCG 29225
Query 48651 GTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691
||||| || ||||| || || || || ||||| | ||||||
Sbjct 29224 GTCCAGAAGGATGCTTCGGCCTTCTTGTACATCTGCCATAT 29184
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694639875727840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |