Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq1001 163 6e-35
seq224 141 2e-28
seq2223 120 6e-22
seq2619 111 3e-19
>seq1001
Length=158095
Score = 163 bits (180), Expect = 6e-35
Identities = 175/229 (76%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930
||||||||| || ||||| || || || | ||| || || |||||||||||||| |
Sbjct 24788 ACCACCACGGAGACGAAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGA 24847
Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990
|||| || ||||| ||||| || || || || || |||||||| || || ||||| |
Sbjct 24848 CAAG-GTCCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCTGGTG 24906
Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
||||||||||||||||||||||||| | || || | || |||||||| |||| || |
Sbjct 24907 GAATACCCTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCGGAAGACTCAA 24966
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
| ||||| ||||| ||||| || || | ||||| ||||| || |||||
Sbjct 24967 CCTCGAGGGTGATAGTCTTTCCAGTGAGCGTCTTGACGAAGATTTGCAT 25015
Score = 143 bits (158), Expect = 6e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||||||||| || || |||| || | ||||| || || ||||||||||||||
Sbjct 24561 CCACCACGCAGACGGAGCACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 24620
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
| || ||||| ||||| || || || || || ||||| | || || ||||| ||
Sbjct 24621 AATGTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCTGGTGGG 24680
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| |||||||||||||| ||||| | || || | ||||| ||||| |||| ||| |||
Sbjct 24681 ATGCCCTCCTTGTCTTGAATCTTCGACTTGACATTGTCGATGGTGTCTGAAGATTCCACT 24740
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| ||||| || || | ||||| ||||| || |||||
Sbjct 24741 TCTAGTGTGATAGTCTTGCCGGTAAGTGTCTTGACGAAGATTTGCAT 24787
Score = 141 bits (156), Expect = 2e-28
Identities = 157/207 (76%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| |||||||| || || || || | ||| || || || |||||||||||||
Sbjct 25016 ACCACCGCGCAGGCGGAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGA 25075
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||||||||| ||||| || ||||| || || | ||| || || || ||
Sbjct 25076 GAGAGTGCGGCCATCCTCGAGTTGCTTGCCGGCGAAAATGAGACGCTGCTGATCCGGAGG 25135
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
||| || |||||||| |||||| ||||| || || | ||||||||||| || | || |
Sbjct 25136 AATTCCTTCCTTGTCCTGGATC-TTGCTCTTCACATTGTCGATAGTGTCGGAGGACTCAA 25194
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCA 283077
| ||||| ||||| ||||| || ||||
Sbjct 25195 CCTCGAGGGTGATGGTCTTGCCGGTCA 25221
>seq224
Length=177688
Score = 141 bits (156), Expect = 2e-28
Identities = 141/180 (78%), Gaps = 2/180 (1%)
Strand=Plus/Plus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
||||||||||||||||||| | |||||||||||||| | ||| || || || ||||||
Sbjct 19043 TTTTGGATGTTGTAGTCAGACAAAGTGCGGCCATCCTCCAATTGCTTTCCAGCGAAGATC 19102
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATC 283030
| ||| || ||||| ||||| ||||||||||| || ||| ||||| || || ||||
Sbjct 19103 AGACGCTGCTGGTCCGGTGGAATTCCCTCCTTGTCCTGAATC-TTGCTCTTGACATTATC 19161
Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
||| ||||| || | ||||| || || ||||| ||||| ||||| | ||||| |||||
Sbjct 19162 GATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 19221
>seq2223
Length=225719
Score = 120 bits (132), Expect = 6e-22
Identities = 108/136 (79%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||||||||| || ||||| || | ||| || || |||||||||||||| |
Sbjct 207997 ACCACCACGCAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGA 207938
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||||||||| || || || ||||| |||||||| || || ||||| ||
Sbjct 207937 GAGAGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGG 207878
Query 282992 AATACCCTCCTTGTCT 283007
||| ||||||||||||
Sbjct 207877 AATTCCCTCCTTGTCT 207862
>seq2619
Length=45072
Score = 111 bits (122), Expect = 3e-19
Identities = 135/184 (73%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 230227 TCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCG 230286
|||||||||||||| | |||||| | || || ||||| || || || || ||| | ||
Sbjct 29857 TCGGCATGAATGCTAAGCTCATGTGCCAGTACATCGAGTTTGTCGCGGACCGTCTGTTGT 29916
Query 230287 TGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCA 230346
|||| || ||| | |||| | || ||| ||| ||||| |||| ||| |||||| ||
Sbjct 29917 TGGCACTCGGGAATCAGAAGTTCTACAACGCCACCAACCCATTCGATTTCATGGAGAACA 29976
Query 230347 TTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCG 230406
|||| || || || || ||||||||||| |||||||| | || || || | | |||
Sbjct 29977 TTTCTCTAGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGACTACCAGAAGGCCG 30036
Query 230407 GTGT 230410
||||
Sbjct 30037 GTGT 30040
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046694526806474
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |