Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03- 01] 3,331 sequences; 60,439,160 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq1001 131 1e-25 seq224 107 1e-18 seq2223 84.2 2e-11 >seq1001 Length=158095 Score = 131 bits (144), Expect = 1e-25 Identities = 159/212 (75%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTC 44187 || ||||| || ||| |||||| ||||||||||| |||| | || | || |||| || Sbjct 24807 ACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAAGGT-CCGGCCGTCCTC 24865 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| || || |||||||| |||||||| |||| || | ||| ||||| || Sbjct 24866 GAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCTGGTGGAATACCCTCCTTGTCTTG 24925 Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||| ||| || ||| | || ||||||| || || ||||| | || || ||| Sbjct 24926 GATCTTGGACTTGACATTGT--CAATAGTGTCGGAAGACTCAACCTCGAGGGTGATAGTC 24983 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| ||||| ||||| |||||||||||||| Sbjct 24984 TTTCCAGTGAGCGTCTTGACGAAGATTTGCAT 25015 Score = 127 bits (140), Expect = 1e-24 Identities = 168/231 (73%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 44109 TTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG 44168 |||| || | ||| | | ||||| ||| || ||||||||||| ||||||||||| ||| Sbjct 24559 TTCCACCACGCAGACGGAGCACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGC 24618 Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 | | || |||| || |||||||| || || ||||| | |||||||| |||| | Sbjct 24619 TCAATGTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCTGGTG 24678 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286 | | || ||||| || |||||| ||| || ||| | |||||||| | ||||| Sbjct 24679 GGATGCCCTCCTTGTCTTGAATCTTCGACTTGACATTGT--CGATGGTGTCTGAAGATTC 24736 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || | || || ||||| || || || ||||| |||||||||||||| Sbjct 24737 CACTTCTAGTGTGATAGTCTTGCCGGTAAGTGTCTTGACGAAGATTTGCAT 24787 Score = 95.1 bits (104), Expect = 9e-15 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || ||| |||||| || |||||||| || | ||| ||| | || || Sbjct 25035 ACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCCTCG 25094 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| ||||| || || | |||||||||||| | ||| | |||||||| ||| Sbjct 25095 AGTTGCTTGCCGGCGAAAATGAGACGCTGCTGATCCGGAGGAATTCCTTCCTTGTCCTGG 25154 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | || ||||||| ||| || ||||| | || || ||||| Sbjct 25155 ATCTTGCTCTTCACATTGTCGATAGTGTCGGAGGACTCAACCTCGAGGGTGATGGTCTTG 25214 Query 44309 CCCGT 44313 || || Sbjct 25215 CCGGT 25219 >seq224 Length=177688 Score = 107 bits (118), Expect = 1e-18 Identities = 137/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 44141 GTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCG 44200 |||| | |||||||||||||||| || | | ||| | || |||| ||||| || Sbjct 19034 GTGCACACCTTTTGGATGTTGTAGTCAGACAAAGTGCGGCCATCCTCCAATTGCTTTCCA 19093 Query 44201 GCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTC 44260 || ||||||| ||||||||| || | || | || ||||| ||| ||||| ||| Sbjct 19094 GCGAAGATCAGACGCTGCTGGTCCGGTGGAATTCCCTCCTTGTCCTGAATCTTGCTCTTG 19153 Query 44261 AATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTC 44320 | | | |||||||||| ||| || ||||| | || || ||||| |||||||||||| Sbjct 19154 ACATTATCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTC 19213 Query 44321 TTCACGAAG 44329 || |||||| Sbjct 19214 TTGACGAAG 19222 >seq2223 Length=225719 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| || ||| |||||| ||||||||||| || | ||| ||| | || || Sbjct 207978 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGGCCATCCTCG 207919 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 |||||||| ||||| |||||||| |||||||| || | || | || ||||| || Sbjct 207918 AGCTGCTTTCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGGAATTCCCTCCTTGTC 207863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359975785627227