Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudocercospora_20musae_20[genbank_20GCA_5F001578225.1_202016-03-
01] 3,331 sequences; 60,439,160 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq1001 131 1e-25
seq224 107 1e-18
seq2223 84.2 2e-11
>seq1001
Length=158095
Score = 131 bits (144), Expect = 1e-25
Identities = 159/212 (75%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTC 44187
|| ||||| || ||| |||||| ||||||||||| |||| | || | || |||| ||
Sbjct 24807 ACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAAGGT-CCGGCCGTCCTC 24865
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| || || |||||||| |||||||| |||| || | ||| ||||| ||
Sbjct 24866 GAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCTGGTGGAATACCCTCCTTGTCTTG 24925
Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305
||||| ||| || ||| | || ||||||| || || ||||| | || || |||
Sbjct 24926 GATCTTGGACTTGACATTGT--CAATAGTGTCGGAAGACTCAACCTCGAGGGTGATAGTC 24983
Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| ||||| ||||| ||||||||||||||
Sbjct 24984 TTTCCAGTGAGCGTCTTGACGAAGATTTGCAT 25015
Score = 127 bits (140), Expect = 1e-24
Identities = 168/231 (73%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 44109 TTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG 44168
|||| || | ||| | | ||||| ||| || ||||||||||| ||||||||||| |||
Sbjct 24559 TTCCACCACGCAGACGGAGCACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGC 24618
Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228
| | || |||| || |||||||| || || ||||| | |||||||| |||| |
Sbjct 24619 TCAATGTCCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCTGGTG 24678
Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286
| | || ||||| || |||||| ||| || ||| | |||||||| | |||||
Sbjct 24679 GGATGCCCTCCTTGTCTTGAATCTTCGACTTGACATTGT--CGATGGTGTCTGAAGATTC 24736
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| || | || || ||||| || || || ||||| ||||||||||||||
Sbjct 24737 CACTTCTAGTGTGATAGTCTTGCCGGTAAGTGTCTTGACGAAGATTTGCAT 24787
Score = 95.1 bits (104), Expect = 9e-15
Identities = 132/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || ||| |||||| || |||||||| || | ||| ||| | || ||
Sbjct 25035 ACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCCTCG 25094
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| ||||| ||||| || || | |||||||||||| | ||| | |||||||| |||
Sbjct 25095 AGTTGCTTGCCGGCGAAAATGAGACGCTGCTGATCCGGAGGAATTCCTTCCTTGTCCTGG 25154
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||||| | | || ||||||| ||| || ||||| | || || |||||
Sbjct 25155 ATCTTGCTCTTCACATTGTCGATAGTGTCGGAGGACTCAACCTCGAGGGTGATGGTCTTG 25214
Query 44309 CCCGT 44313
|| ||
Sbjct 25215 CCGGT 25219
>seq224
Length=177688
Score = 107 bits (118), Expect = 1e-18
Identities = 137/189 (72%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 44141 GTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCG 44200
|||| | |||||||||||||||| || | | ||| | || |||| ||||| ||
Sbjct 19034 GTGCACACCTTTTGGATGTTGTAGTCAGACAAAGTGCGGCCATCCTCCAATTGCTTTCCA 19093
Query 44201 GCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTC 44260
|| ||||||| ||||||||| || | || | || ||||| ||| ||||| |||
Sbjct 19094 GCGAAGATCAGACGCTGCTGGTCCGGTGGAATTCCCTCCTTGTCCTGAATCTTGCTCTTG 19153
Query 44261 AATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTC 44320
| | | |||||||||| ||| || ||||| | || || ||||| ||||||||||||
Sbjct 19154 ACATTATCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTC 19213
Query 44321 TTCACGAAG 44329
|| ||||||
Sbjct 19214 TTGACGAAG 19222
>seq2223
Length=225719
Score = 84.2 bits (92), Expect = 2e-11
Identities = 88/116 (76%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||||||| || ||| |||||| ||||||||||| || | ||| ||| | || ||
Sbjct 207978 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGGCCATCCTCG 207919
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244
|||||||| ||||| |||||||| |||||||| || | || | || ||||| ||
Sbjct 207918 AGCTGCTTTCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGGAATTCCCTCCTTGTC 207863
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359975785627227
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |