Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016
-05-10] 83 sequences; 35,818,201 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq71 91.5 3e-13
seq3 91.5 3e-13
seq1 84.2 5e-11
>seq71
Length=14946
Score = 91.5 bits (100), Expect = 3e-13
Identities = 173/252 (69%), Gaps = 2/252 (1%)
Strand=Plus/Minus
Query 230387 TCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCC 230446
||||||| || || || | ||| | |||||| | ||| || |||| ||| |
Sbjct 12455 TCATTACCGAGGCTGTCTCCATCGAGCAAGAGTTCTTGACTGAGGCACTTCCCTGTGCGC 12396
Query 230447 TTATTGGCATGAACGCTGAACTT-ATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505
| | ||||||||||| ||||| ||| || ||||| || ||||| |||||| | |
Sbjct 12395 TGCTCGGCATGAACGCC-AACTTGATGAAGCAATACATTGAGTTCGTCGCCGACAGGCTG 12337
Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565
| | | || ||| ||||||| ||||| | | ||||| || | || ||||||
Sbjct 12336 CTACTCTCCCTCGGTAACGAGAAGTACTACAAGGCGACCAACCCATTCGACTTCATGGAG 12277
Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625
||| || || ||| |||||||||||||| || ||||||||| ||||| || | |
Sbjct 12276 AACATCTCCCTGGCAGGAAAGACCAACTTCTTTGAGAAGCGTGTCGCCGACTACCAAAAG 12217
Query 230626 CCTGGTGTGATG 230637
||||||| |||
Sbjct 12216 ACTGGTGTCATG 12205
>seq3
Length=1861714
Score = 91.5 bits (100), Expect = 3e-13
Identities = 173/252 (69%), Gaps = 2/252 (1%)
Strand=Plus/Plus
Query 230387 TCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCC 230446
||||||| || || || | ||| | |||||| | ||| || |||| ||| |
Sbjct 165275 TCATTACCGAGGCTGTCTCCATCGAGCAAGAGTTCTTGACTGAGGCACTTCCCTGTGCGC 165334
Query 230447 TTATTGGCATGAACGCTGAACTT-ATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505
| | ||||||||||| ||||| ||| || ||||| || ||||| |||||| | |
Sbjct 165335 TGCTCGGCATGAACGC-CAACTTGATGAAGCAATACATTGAGTTCGTCGCCGACAGGCTG 165393
Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565
| | | || ||| ||||||| ||||| | | ||||| || | || ||||||
Sbjct 165394 CTACTCTCCCTCGGTAACGAGAAGTACTACAAGGCGACCAACCCATTCGACTTCATGGAG 165453
Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625
||| || || ||| |||||||||||||| || ||||||||| ||||| || | |
Sbjct 165454 AACATCTCCCTGGCAGGAAAGACCAACTTCTTTGAGAAGCGTGTCGCCGACTACCAAAAG 165513
Query 230626 CCTGGTGTGATG 230637
||||||| |||
Sbjct 165514 ACTGGTGTCATG 165525
Score = 91.5 bits (100), Expect = 3e-13
Identities = 173/252 (69%), Gaps = 2/252 (1%)
Strand=Plus/Plus
Query 230387 TCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCC 230446
||||||| || || || | ||| | |||||| | ||| || |||| ||| |
Sbjct 175131 TCATTACCGAGGCTGTCTCCATCGAGCAAGAGTTCTTGACTGAGGCACTTCCCTGTGCGC 175190
Query 230447 TTATTGGCATGAACGCTGAACTT-ATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505
| | ||||||||||| ||||| ||| || ||||| || ||||| |||||| | |
Sbjct 175191 TGCTCGGCATGAACGC-CAACTTGATGAAGCAATACATTGAGTTCGTCGCCGACAGGCTG 175249
Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565
| | | || ||| ||||||| ||||| | | ||||| || | || ||||||
Sbjct 175250 CTACTCTCCCTCGGTAACGAGAAGTACTACAAGGCGACCAACCCATTCGACTTCATGGAG 175309
Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625
||| || || ||| |||||||||||||| || ||||||||| ||||| || | |
Sbjct 175310 AACATCTCCCTGGCAGGAAAGACCAACTTCTTTGAGAAGCGTGTCGCCGACTACCAAAAG 175369
Query 230626 CCTGGTGTGATG 230637
||||||| |||
Sbjct 175370 ACTGGTGTCATG 175381
>seq1
Length=2552699
Score = 84.2 bits (92), Expect = 5e-11
Identities = 198/299 (66%), Gaps = 0/299 (0%)
Strand=Plus/Minus
Query 319369 AGGGCGTAGTAACTCGCTGATTCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTG 319428
|||| |||||| ||| | ||||| || ||| ||||| || | || || ||||||
Sbjct 879518 AGGGTGTAGTAGCTCTTAGCCTCGGGCTTCTGCTTGACGAATTCAGCCAAGTTACCCTTG 879459
Query 319429 TACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGG 319488
|| ||||| ||| ||||| ||| ||| ||||| || | ||||||
Sbjct 879458 TAGCATGCAAGCTTCTTTCCAGGCTCGTAGTGGTAGATATCCGTGCAGACTTCATCGAGG 879399
Query 319489 AACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCA 319548
|| ||||||||||| || || |||| | | | | || | | | ||||||| ||
Sbjct 879398 AAGCCGGAGTCGTGAGAAACGATCAGGGAAGTGATCTCGGTGTGAGTTTTCAGGTAATCC 879339
Query 319549 ATCAACCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGCAGTAGC 319608
| |||| | ||||| | ||| | || ||||| || ||||| ||||| || |
Sbjct 879338 TGGAGCCACTTGACGTTGGCAACATCCAAGTGATTGGTAGGTTCGTCCAGAAGGAGAACA 879279
Query 319609 TTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTTCCACCCTCCGGAAAG 319667
| || |||| | ||| || | ||||||||||| ||||| ||||| || ||||| ||
Sbjct 879278 TCGGCCTTCATCAACATAGCTCTGGCAAGAGCGAGCTTCATCTTCCATCCACCGGATAG 879220
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057822875070290
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