Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016 -05-10] 83 sequences; 35,818,201 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq71 91.5 3e-13 seq3 91.5 3e-13 seq1 84.2 5e-11 >seq71 Length=14946 Score = 91.5 bits (100), Expect = 3e-13 Identities = 173/252 (69%), Gaps = 2/252 (1%) Strand=Plus/Minus Query 230387 TCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCC 230446 ||||||| || || || | ||| | |||||| | ||| || |||| ||| | Sbjct 12455 TCATTACCGAGGCTGTCTCCATCGAGCAAGAGTTCTTGACTGAGGCACTTCCCTGTGCGC 12396 Query 230447 TTATTGGCATGAACGCTGAACTT-ATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 | | ||||||||||| ||||| ||| || ||||| || ||||| |||||| | | Sbjct 12395 TGCTCGGCATGAACGCC-AACTTGATGAAGCAATACATTGAGTTCGTCGCCGACAGGCTG 12337 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 | | | || ||| ||||||| ||||| | | ||||| || | || |||||| Sbjct 12336 CTACTCTCCCTCGGTAACGAGAAGTACTACAAGGCGACCAACCCATTCGACTTCATGGAG 12277 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625 ||| || || ||| |||||||||||||| || ||||||||| ||||| || | | Sbjct 12276 AACATCTCCCTGGCAGGAAAGACCAACTTCTTTGAGAAGCGTGTCGCCGACTACCAAAAG 12217 Query 230626 CCTGGTGTGATG 230637 ||||||| ||| Sbjct 12216 ACTGGTGTCATG 12205 >seq3 Length=1861714 Score = 91.5 bits (100), Expect = 3e-13 Identities = 173/252 (69%), Gaps = 2/252 (1%) Strand=Plus/Plus Query 230387 TCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCC 230446 ||||||| || || || | ||| | |||||| | ||| || |||| ||| | Sbjct 165275 TCATTACCGAGGCTGTCTCCATCGAGCAAGAGTTCTTGACTGAGGCACTTCCCTGTGCGC 165334 Query 230447 TTATTGGCATGAACGCTGAACTT-ATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 | | ||||||||||| ||||| ||| || ||||| || ||||| |||||| | | Sbjct 165335 TGCTCGGCATGAACGC-CAACTTGATGAAGCAATACATTGAGTTCGTCGCCGACAGGCTG 165393 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 | | | || ||| ||||||| ||||| | | ||||| || | || |||||| Sbjct 165394 CTACTCTCCCTCGGTAACGAGAAGTACTACAAGGCGACCAACCCATTCGACTTCATGGAG 165453 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625 ||| || || ||| |||||||||||||| || ||||||||| ||||| || | | Sbjct 165454 AACATCTCCCTGGCAGGAAAGACCAACTTCTTTGAGAAGCGTGTCGCCGACTACCAAAAG 165513 Query 230626 CCTGGTGTGATG 230637 ||||||| ||| Sbjct 165514 ACTGGTGTCATG 165525 Score = 91.5 bits (100), Expect = 3e-13 Identities = 173/252 (69%), Gaps = 2/252 (1%) Strand=Plus/Plus Query 230387 TCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCC 230446 ||||||| || || || | ||| | |||||| | ||| || |||| ||| | Sbjct 175131 TCATTACCGAGGCTGTCTCCATCGAGCAAGAGTTCTTGACTGAGGCACTTCCCTGTGCGC 175190 Query 230447 TTATTGGCATGAACGCTGAACTT-ATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 | | ||||||||||| ||||| ||| || ||||| || ||||| |||||| | | Sbjct 175191 TGCTCGGCATGAACGC-CAACTTGATGAAGCAATACATTGAGTTCGTCGCCGACAGGCTG 175249 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 | | | || ||| ||||||| ||||| | | ||||| || | || |||||| Sbjct 175250 CTACTCTCCCTCGGTAACGAGAAGTACTACAAGGCGACCAACCCATTCGACTTCATGGAG 175309 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625 ||| || || ||| |||||||||||||| || ||||||||| ||||| || | | Sbjct 175310 AACATCTCCCTGGCAGGAAAGACCAACTTCTTTGAGAAGCGTGTCGCCGACTACCAAAAG 175369 Query 230626 CCTGGTGTGATG 230637 ||||||| ||| Sbjct 175370 ACTGGTGTCATG 175381 >seq1 Length=2552699 Score = 84.2 bits (92), Expect = 5e-11 Identities = 198/299 (66%), Gaps = 0/299 (0%) Strand=Plus/Minus Query 319369 AGGGCGTAGTAACTCGCTGATTCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTG 319428 |||| |||||| ||| | ||||| || ||| ||||| || | || || |||||| Sbjct 879518 AGGGTGTAGTAGCTCTTAGCCTCGGGCTTCTGCTTGACGAATTCAGCCAAGTTACCCTTG 879459 Query 319429 TACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGG 319488 || ||||| ||| ||||| ||| ||| ||||| || | |||||| Sbjct 879458 TAGCATGCAAGCTTCTTTCCAGGCTCGTAGTGGTAGATATCCGTGCAGACTTCATCGAGG 879399 Query 319489 AACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCA 319548 || ||||||||||| || || |||| | | | | || | | | ||||||| || Sbjct 879398 AAGCCGGAGTCGTGAGAAACGATCAGGGAAGTGATCTCGGTGTGAGTTTTCAGGTAATCC 879339 Query 319549 ATCAACCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGCAGTAGC 319608 | |||| | ||||| | ||| | || ||||| || ||||| ||||| || | Sbjct 879338 TGGAGCCACTTGACGTTGGCAACATCCAAGTGATTGGTAGGTTCGTCCAGAAGGAGAACA 879279 Query 319609 TTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTTCCACCCTCCGGAAAG 319667 | || |||| | ||| || | ||||||||||| ||||| ||||| || ||||| || Sbjct 879278 TCGGCCTTCATCAACATAGCTCTGGCAAGAGCGAGCTTCATCTTCCATCCACCGGATAG 879220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057822875070290