Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016
-05-10] 83 sequences; 35,818,201 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq3 116 4e-21
>seq3
Length=1861714
Score = 116 bits (128), Expect = 4e-21
Identities = 364/556 (65%), Gaps = 11/556 (2%)
Strand=Plus/Minus
Query 23831 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTC 23890
||| || || | |||||||| || | ||||| || || || || || || || ||| |
Sbjct 165525 CATGACACCAGTCTTTTGGTAGTCGGCGACACGCTTCTCAAAGAAGTTGGTCTTTCCTGC 165466
Query 23891 TAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCC 23950
| || || || |||||||| ||| |||| ||||| | || ||| | ||| | | |
Sbjct 165465 CAGGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTCGCCTTGTAG-TACTTCTCGTTAC 165407
Query 23951 CAATTCAGAA-ATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAAT 24009
| | ||| | || || || ||||| ||||| || ||| ||||||| | |
Sbjct 165406 CGAGGGAGAGTAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGT 165347
Query 24010 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 24069
|||| || | || | ||||| ||| |||| | || ||||| || || ||||| |
Sbjct 165346 TCATGCCGAGCAGCGCACAGGGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGGAGACAG 165287
Query 24070 CGTCTGTTATAATAGATCTT--ACTGTTT-CTTCACTCGGTGGATACAATAAATGTTTAA 24126
| || || || | |||| || | | ||| | || || | | | || |
Sbjct 165286 CCTCGGTAATGACG--TCTTGGACGGCCTGCTTGCTTGGGCGGTGTCTA-AGGTGGGAGA 165230
Query 24127 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 24186
| | | || ||||| || ||| ||||||||||| | || | ||||| || |
Sbjct 165229 AGAGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGA 165170
Query 24187 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAG 24246
| || || |||| ||| ||||||||||| || ||||| || ||||| || || || || |
Sbjct 165169 AGGTCAGGCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGG 165110
Query 24247 AAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGG---CGC 24303
| ||||| || || || || || || ||||||| || | | | | || |
Sbjct 165109 AGAAGAAGATACCCTCAACGGCGGCGAAGGCAACGAGGCGCTGAGCGAAGGTGGAATCCT 165050
Query 24304 TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTA 24363
|||| || |||||| | ||||| ||||||||||| || | ||||| || ||||| |
Sbjct 165049 TGTCTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGA 164990
Query 24364 TAGCATTAAAGAGATA 24379
| ||||| ||||| ||
Sbjct 164989 TGGCATTGAAGAGGTA 164974
Score = 116 bits (128), Expect = 4e-21
Identities = 364/556 (65%), Gaps = 11/556 (2%)
Strand=Plus/Minus
Query 23831 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTC 23890
||| || || | |||||||| || | ||||| || || || || || || || ||| |
Sbjct 175381 CATGACACCAGTCTTTTGGTAGTCGGCGACACGCTTCTCAAAGAAGTTGGTCTTTCCTGC 175322
Query 23891 TAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCC 23950
| || || || |||||||| ||| |||| ||||| | || ||| | ||| | | |
Sbjct 175321 CAGGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTCGCCTTGTAG-TACTTCTCGTTAC 175263
Query 23951 CAATTCAGAA-ATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAAT 24009
| | ||| | || || || ||||| ||||| || ||| ||||||| | |
Sbjct 175262 CGAGGGAGAGTAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGT 175203
Query 24010 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 24069
|||| || | || | ||||| ||| |||| | || ||||| || || ||||| |
Sbjct 175202 TCATGCCGAGCAGCGCACAGGGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGGAGACAG 175143
Query 24070 CGTCTGTTATAATAGATCTT--ACTGTTT-CTTCACTCGGTGGATACAATAAATGTTTAA 24126
| || || || | |||| || | | ||| | || || | | | || |
Sbjct 175142 CCTCGGTAATGACG--TCTTGGACGGCCTGCTTGCTTGGGCGGTGTCTA-AGGTGGGAGA 175086
Query 24127 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 24186
| | | || ||||| || ||| ||||||||||| | || | ||||| || |
Sbjct 175085 AGAGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGA 175026
Query 24187 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAG 24246
| || || |||| ||| ||||||||||| || ||||| || ||||| || || || || |
Sbjct 175025 AGGTCAGGCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGG 174966
Query 24247 AAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGG---CGC 24303
| ||||| || || || || || || ||||||| || | | | | || |
Sbjct 174965 AGAAGAAGATACCCTCAACGGCGGCGAAGGCAACGAGGCGCTGAGCGAAGGTGGAATCCT 174906
Query 24304 TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTA 24363
|||| || |||||| | ||||| ||||||||||| || | ||||| || ||||| |
Sbjct 174905 TGTCTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGA 174846
Query 24364 TAGCATTAAAGAGATA 24379
| ||||| ||||| ||
Sbjct 174845 TGGCATTGAAGAGGTA 174830
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593720984013840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |