Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016
-05-10] 83 sequences; 35,818,201 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq15 107 2e-18
seq20 98.7 8e-16
seq4 84.2 2e-11
>seq15
Length=1123021
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || || || |||| || | ||||||||||| || ||||| |||||||
Sbjct 653311 CCTCCACGGAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 653252
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| || ||||||| ||||| ||||| || | || || | |||||||||| |||
Sbjct 653251 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGA 653192
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| || |||||||| |||||| || || | | ||| ||| || | ||||
Sbjct 653191 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACC 653132
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||| || |||||||| || | || || || || ||||||||
Sbjct 653131 TCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 653085
>seq20
Length=799479
Score = 98.7 bits (108), Expect = 8e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
|| |||| || | ||| |||||||| |||||||| ||||| | ||||| || |||||
Sbjct 288325 AGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 288266
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|| ||||| || || || |||| || | |||||||||| || | ||| ||||||||
Sbjct 288265 TCAAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC 288206
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
||| || ||||| | | ||| || || | ||| |||| || ||||||
Sbjct 288205 TGGATTTTCGACTTCACATTGTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTC 288146
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
||||| || | || ||||| || || |||||
Sbjct 288145 TTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 288114
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| |||| ||||| || |||||||| |||||||| ||||||| |
Sbjct 288568 CCACCACGAAGACGGAGAACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGAC 288509
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| || | ||||||||||| || || ||| | || || | |||||||||| ||
Sbjct 288508 AGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGG 288449
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| || || || || ||||| || || | | | ||||| | |||
Sbjct 288448 ATACCCTCTTTATCTTGAATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACC 288389
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||||| |||||||| || | || |||||||| || |||||
Sbjct 288388 TCAAGCGTAATCGTCTTGCCCGTAAGAGTCTTGACAAAAATCTGCAT 288342
>seq4
Length=1854919
Score = 84.2 bits (92), Expect = 2e-11
Identities = 127/181 (70%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 20986 CCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAA 21045
|||| || ||||| ||||| | || || | | ||||| ||||| ||||| ||| | |
Sbjct 704163 CCTTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGA 704104
Query 21046 TAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGC 21105
| || | |||||||||| ||| | || |||||||| |||||| || || | |
Sbjct 704103 TCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGT 704044
Query 21106 CGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAA 21165
||| |||||| || ||| || | ||| ||||||||||| || || || ||||| |
Sbjct 704043 CGATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGA 703984
Query 21166 A 21166
|
Sbjct 703983 A 703983
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422258772858428
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |