Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016
-05-10] 83 sequences; 35,818,201 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq15 113 4e-20
seq20 111 1e-19
seq4 89.7 4e-13
>seq15
Length=1123021
Score = 113 bits (124), Expect = 4e-20
Identities = 164/232 (71%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570
|||||| || | ||||| |||||||| | || ||||| || || |||||||| ||
Sbjct 653312 ACCTCCACGGAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGA 653253
Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630
| ||||| ||||||||||| || |||||| |||| || |||||||| || || ||
Sbjct 653252 AAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGG 653193
Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690
|| ||||||||||| || || || || | |||| ||||| | ||| ||
Sbjct 653192 AATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCAC 653133
Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
||| | ||| | || ||||| ||||| || || || || || |||||| ||
Sbjct 653132 CTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCATGACT 653081
>seq20
Length=799479
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||| | || ||||| || ||||||||||| ||| | ||||| |||||
Sbjct 288322 ACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCA 288263
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || |||||| | || || |||||||| || ||||| ||||||||||||||
Sbjct 288262 AGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 288203
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
||||| || || | |||| |||||| | ||| ||||| | || | || |||
Sbjct 288202 ATTTTCGACTTCACATTGTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTG 288143
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || || || || ||||||||
Sbjct 288142 CCAGTGAGGGTCTTGACGAAGATCTGCAT 288114
Score = 107 bits (118), Expect = 2e-18
Identities = 144/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || ||||||||||| || || ||||| |||||| ||||| || |||
Sbjct 288538 GTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCCAGCTGCTTACCA 288479
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| |||| || |||||||| || ||||| || ||||| || ||| ||| || ||
Sbjct 288478 GCAAAGATCAGGCGCTGCTGGTCCGGAGGGATACCCTCTTTATCTTGAATCTTCGACTTG 288419
Query 118662 ACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGT 118720
|| | || | ||| || | || | || ||||| | || | ||| ||||| || |||||
Sbjct 288418 ACGTTATCAATGGTATCGGATGAT-TCCACCTCAAGCGTAATCGTCTTGCCCGTAAGAGT 288360
Query 118721 TTTTACAAAAATCTGCAT 118738
|| ||||||||||||||
Sbjct 288359 CTTGACAAAAATCTGCAT 288342
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | || ||| || || |||||||| ||||||| || | | ||||||
Sbjct 289007 CACCAAGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTC 288948
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || ||||| |||| || |||||||| || || || || |||||||| ||
Sbjct 288947 CAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTG 288888
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||| || || || | || | |||||||| ||| ||||||| || | || ||
Sbjct 288887 AATCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCGAGAGTAATGGTCTT 288828
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| |||| || || || |||||||||||
Sbjct 288827 TCCAGTCAAGGTCTTGACGAAAATCTGCAT 288798
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || ||||||||||| || ||||| |||||||||||| || ||
Sbjct 288766 GTCGACTCCTTCTGGATGTTGTAATCAGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCC 288707
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| | || || |||||||| || ||||| || |||||||| ||| || || ||
Sbjct 288706 GCGAAAATCAGGCGCTGCTGGTCCGGAGGGATACCCTCCTTATCTTGGATCTTAGACTTG 288647
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| ||| |||| |||||| || | || | || || || || |||||
Sbjct 288646 ACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTCTTTCCAGTGAGAGTC 288587
Query 118722 TTTACAAAAATCTGCAT 118738
|| || || || |||||
Sbjct 288586 TTGACGAAGATTTGCAT 288570
Score = 89.7 bits (98), Expect = 4e-13
Identities = 132/187 (71%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||||| || ||||| || || |||||||| ||| | ||||| ||||||
Sbjct 288094 ACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCG 288035
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
|| || || || ||| |||| ||||| ||||| || || || || ||||||||||||
Sbjct 288034 AGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGG 287975
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| ||| || | ||||||||| | ||| | || |||
Sbjct 287974 ATCTTGCTCTTGACGTTGTCGATGGTATCGGACGACTCGACCTCTAGGGTGATGGTCTTG 287915
Query 118710 CCGGTCA 118716
|| ||||
Sbjct 287914 CCCGTCA 287908
>seq4
Length=1854919
Score = 89.7 bits (98), Expect = 4e-13
Identities = 127/179 (71%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
|| || |||||||| ||| | |||||| |||||||||||| || ||||| ||||
Sbjct 704161 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 704102
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670
|| |||||||| || || || || |||||||||||| || || || || | |||
Sbjct 704101 AGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 704042
Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 118729
| || || | | ||||||||| | ||| | || ||||| |||| || || || ||
Sbjct 704041 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 703983
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433829961153436
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