Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016
-05-10] 83 sequences; 35,818,201 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq20 122 6e-23
seq15 113 3e-20
seq4 87.8 1e-12
>seq20
Length=799479
Score = 122 bits (134), Expect = 6e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| |||| ||| | ||| || ||||| |||||||||||||| || ||| ||||
Sbjct 288325 AGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 288266
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | |||||| || |||||||| || ||||||||||| || | || |||||||||
Sbjct 288265 TCAAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCC 288206
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
|| || ||| | || | | || | |||| ||| || || |||| ||||||||
Sbjct 288205 TGGATTTTCGACTTCACATTGTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTC 288146
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
||||| ||||| || || || |||||||||||
Sbjct 288145 TTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 288114
Score = 96.9 bits (106), Expect = 2e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| ||||| || | || |||||||| | || || ||||| ||||||||||||||
Sbjct 288112 CCACCGCGAAGACGAAGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 288053
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| |||| || | |||||||| ||||| || || || |||||||| |||
Sbjct 288052 AGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGA 287993
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||||||| ||||| ||| | | | | || | ||||| ||| |||||
Sbjct 287992 ATTCCCTCCTTGTCTTGGATCTTGCTCTTGACGTTGTCGATGGTATCGGACGACTCGACC 287933
Query 34343 TCCACCGTGATGGTTTTGCCGGT 34365
|| | |||||||| ||||| ||
Sbjct 287932 TCTAGGGTGATGGTCTTGCCCGT 287910
Score = 96.9 bits (106), Expect = 2e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| |||||||| || ||||| ||| | || || | ||||||||| ||||||
Sbjct 288760 TCCTTCTGGATGTTGTAATCAGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAA 288701
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
|| || ||||||||||| || | | |||||| || ||||| ||| | |
Sbjct 288700 ATCAGGCGCTGCTGGTCCGGAGGGATACCCTCCTTATCTTGGATCTTAGACTTGACGTTA 288641
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
| || | ||| | ||| ||||| |||| ||| || || || || |||||||| || ||
Sbjct 288640 TCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTCTTTCCAGTGAGAGTCTTGACG 288581
Query 34379 AAGATCTGCAT 34389
||||| |||||
Sbjct 288580 AAGATTTGCAT 288570
Score = 91.5 bits (100), Expect = 1e-13
Identities = 137/193 (71%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| ||||||||||| ||||| ||| | || |||| |||||| || || ||
Sbjct 288532 TCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAG 288473
Query 34259 ATGAGCCGCTGCTGGTC--GACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGAT 34316
|| || ||||||||||| || || || |||| || || ||||| ||| | |
Sbjct 288472 ATCAGGCGCTGCTGGTCCGGAGGGATACCCTCT--TTATCTTGAATCTTCGACTTGACGT 288415
Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376
| || | ||||| ||||| || || | ||| || || ||||| || ||||| || |
Sbjct 288414 TATCAATGGTATCGGATGATTCCACCTCAAGCGTAATCGTCTTGCCCGTAAGAGTCTTGA 288355
Query 34377 CAAAGATCTGCAT 34389
|||| ||||||||
Sbjct 288354 CAAAAATCTGCAT 288342
>seq15
Length=1123021
Score = 113 bits (124), Expect = 3e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || || || ||||| |||| ||| | || || ||||| ||||||||||| ||
Sbjct 653311 CCTCCACGGAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 653252
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| |||| || | ||||||||| ||||| || || ||||||||||| |||
Sbjct 653251 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGA 653192
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| | ||||||||| ||||| ||| | || | | || | |||| ||| || ||
Sbjct 653191 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACC 653132
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | ||||| || ||||| || || || ||||| ||||| |||||
Sbjct 653131 TCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 653085
>seq4
Length=1854919
Score = 87.8 bits (96), Expect = 1e-12
Identities = 132/187 (71%), Gaps = 2/187 (1%)
Strand=Plus/Minus
Query 34202 TTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATG 34261
||||| |||||||||||||| || || | || || | ||||||||| || || ||
Sbjct 704161 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 704102
Query 34262 AGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCT 34321
|| ||||||||||| ||| | | ||||||||| ||||| ||| | || | |
Sbjct 704101 AGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 704042
Query 34322 ATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAG 34381
|| | ||||| || ||||| || | |||||||| ||||| || | || || || |||
Sbjct 704041 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAAG 703982
Query 34382 ATCTGCA 34388
|||||
Sbjct 703981 --CTGCA 703977
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323071673192480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |