Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016 -05-10] 83 sequences; 35,818,201 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq21 107 4e-18 seq4 107 4e-18 >seq21 Length=686385 Score = 107 bits (118), Expect = 4e-18 Identities = 130/177 (73%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 254201 CTGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCA 254260 ||| || || | ||| || | ||||| |||||||| |||| ||||||| |||||||| Sbjct 9272 CTGCCCCCCCTACAAAATCATCATCCTCGACGAGGCCGACAGCATGACGCAAGACGCGCA 9213 Query 254261 GTCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTG 254320 | ||| || ||||| |||||||||||| || | | |||||||| ||||||||||| Sbjct 9212 GAGCGCGCTGCGCCGGACGATGGAGACGTACAGCAAGATCACGCGTTTCTGCCTGGTGTG 9153 Query 254321 CAACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATT 254377 ||||| || || ||| || | || ||||| ||||||| ||||| || || Sbjct 9152 TAACTATGTTACGCGGATTATTGATCCCCTGGCGAGTCGGTGCAGTAAGTTCCGCTT 9096 >seq4 Length=1854919 Score = 107 bits (118), Expect = 4e-18 Identities = 130/177 (73%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 254201 CTGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCA 254260 ||| || || | ||| || | ||||| |||||||| |||| ||||||| |||||||| Sbjct 1529110 CTGCCCCCCCTACAAAATCATCATCCTCGACGAGGCCGACAGCATGACGCAAGACGCGCA 1529051 Query 254261 GTCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTG 254320 | ||| || ||||| |||||||||||| || | | |||||||| ||||||||||| Sbjct 1529050 GAGCGCGCTGCGCCGGACGATGGAGACGTACAGCAAGATCACGCGTTTCTGCCTGGTGTG 1528991 Query 254321 CAACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATT 254377 ||||| || || ||| || | || ||||| ||||||| ||||| || || Sbjct 1528990 TAACTATGTTACGCGGATTATTGATCCCCTGGCGAGTCGGTGCAGTAAGTTCCGCTT 1528934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073765258116544