Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016 -05-10] 83 sequences; 35,818,201 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq28 107 4e-18 >seq28 Length=369090 Score = 107 bits (118), Expect = 4e-18 Identities = 179/256 (70%), Gaps = 2/256 (1%) Strand=Plus/Plus Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845 |||| |||||||||||||| ||||| || || ||| || || ||||| |||||| Sbjct 127332 CCGATACCTCCAGCAGTCTTTGAGATCATGGCACATGTCTTGAGCGTGTCATAGATACCC 127391 Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGG-GTGTGACTGT 94904 ||||| ||||| || | | | | | | |||||| || || || |||| |||| ||| Sbjct 127392 TCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTGGGCCTGTG-GTGT 127450 Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964 ||| ||| || ||||| |||||||| || || || || | |||||||| | || Sbjct 127451 ACCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTTGGAAGACATGAGGTTGTA 127510 Query 94965 TGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCAT 95024 ||| || | | || || ||||||||||| || || |||||||||||||| Sbjct 127511 TGTCTCGGTTGTCTTCTCAATATCCTCGCCGTGAATGCCCACCGCAACACGCATAATCAT 127570 Query 95025 GTCCTGAGGGCGCTCA 95040 || ||| || | |||| Sbjct 127571 GTGCTGTGGTCTCTCA 127586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989582947639265