Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016 -05-10] 83 sequences; 35,818,201 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq28 187 3e-42 seq3 136 5e-27 seq71 129 7e-25 seq25 118 1e-21 >seq28 Length=369090 Score = 187 bits (206), Expect = 3e-42 Identities = 396/591 (67%), Gaps = 0/591 (0%) Strand=Plus/Plus Query 63214 CCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 63273 |||||| ||| ||||| | || ||||| | | ||| | |||| | || || || | Sbjct 127000 CCAATCCAGGGCATTCGTTGGGGCACATGAGAGTCCAGGCGCCGTTCTTCTCAACACGCT 127059 Query 63274 TCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGT 63333 |||| |||||||| || ||||| ||||| ||||| || | | | |||||| | Sbjct 127060 TCATGAAGAGATCCGGGATCCAGAGAGCGTAGAATAGGTCACGGGCACGGACTTCCTCCT 127119 Query 63334 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 63393 | || |||||| | | || |||||| | | | ||| | |||||| || || | || Sbjct 127120 TGCCGTGGTTCTTTCTCAAGTCCAGGAACTCAAAGACATCCGCATGCCATGGCTCAACGT 127179 Query 63394 ATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 63453 | ||||| | | | || || || ||||| || ||||| || | ||| || |||||||| | Sbjct 127180 AGATGGCGAAAGCACCGGGTCGCTTGTTACCACCCTGGTCAACGTACCTCGCGGTGTTGT 127239 Query 63454 TATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGC 63513 | | || | | ||| |||| |||||||| || | ||||||||||||| || || Sbjct 127240 TGAAGACGCGGAGCATGGGAACGATACCGTTCGAGTTTCCATTGGTACCGGCAATGTATG 127299 Query 63514 CTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63573 | ||| ||||||| ||| | || || || || || || || | || ||||| | Sbjct 127300 CACCAGTGGCACGGATACGATGGATGTTTAATCCGATACCTCCAGCAGTCTTTGAGATCA 127359 Query 63574 ATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTA 63633 || ||| || | |||||||||||| || || || ||||| || |||||| | | Sbjct 127360 TGGCACATGTCTTGAGCGTGTCATAGATACCCTCAATACTATCCTCCTTCATGTCGACCA 127419 Query 63634 GAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 63693 || ||| |||| ||| | | || || ||||| || | || || ||||||| Sbjct 127420 AGAAGCAGGATGACAGCTGGGCCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAAGCGT 127479 Query 63694 GCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATT 63753 | || || |||| ||| | || ||||| ||||| | | || |||||| Sbjct 127480 GTGTGAAGTATTTGGAAGACATGAGGTTGTATGTCTCGGTTGTCTTCTCAATATCCTCGC 127539 Query 63754 GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAA 63804 ||||| || || || |||||||| | ||||||||| ||||| ||| ||| Sbjct 127540 CGTGAATGCCCACCGCAACACGCATAATCATGTGCTGTGGTCTCTCAGCAA 127590 >seq3 Length=1861714 Score = 136 bits (150), Expect = 5e-27 Identities = 364/553 (66%), Gaps = 5/553 (1%) Strand=Plus/Minus Query 33278 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33337 ||| || || | |||||||| || | ||||| || || || || || || |||||| | Sbjct 165525 CATGACACCAGTCTTTTGGTAGTCGGCGACACGCTTCTCAAAGAAGTTGGTCTTTCCTGC 165466 Query 33338 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCC 33397 || || || || |||||||| || || || ||||| | ||||| | || | | | Sbjct 165465 CAGGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTCGCCTTGTAG-TACTTCTCGTTAC 165407 Query 33398 CAATTCAGAA-ATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAAT 33456 | | ||| | || || || |||||||| || || ||| ||||||| | | Sbjct 165406 CGAGGGAGAGTAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGT 165347 Query 33457 TCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCG 33516 |||| || | || | ||||| ||| |||| | || ||||| || ||||| || | Sbjct 165346 TCATGCCGAGCAGCGCACAGGGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGGAGACAG 165287 Query 33517 CATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACA 33576 | | || || | | |||| | | || || | ||| | || || | Sbjct 165286 CCTCGGTAATGACGTCTTGGACGGCCTGCTTGCTTGGGCGGTGTCTAAGGTGGGAGAAGA 165227 Query 33577 TCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACG 33636 | || ||||| || ||| ||||||||||| | || | ||||| || || | Sbjct 165226 GGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGG 165167 Query 33637 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAA 33696 | || |||| ||| ||||||||||| || ||||| || ||||| ||||| || ||||| | Sbjct 165166 TCAGGCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGA 165107 Query 33697 AGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGT 33753 ||||||| || || || || || ||||||| || | || | | || | ||| Sbjct 165106 AGAAGATACCCTCAACGGCGGCGAAGGCAACGAGGCGCTGAGCGAAGGTGGAATCCTTGT 165047 Query 33754 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGG 33813 | || |||||| | ||||| ||||||||||| || | ||||| || || || |||| Sbjct 165046 CTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGATGG 164987 Query 33814 CATTAAAGAGATA 33826 |||| ||||| || Sbjct 164986 CATTGAAGAGGTA 164974 Score = 136 bits (150), Expect = 5e-27 Identities = 364/553 (66%), Gaps = 5/553 (1%) Strand=Plus/Minus Query 33278 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33337 ||| || || | |||||||| || | ||||| || || || || || || |||||| | Sbjct 175381 CATGACACCAGTCTTTTGGTAGTCGGCGACACGCTTCTCAAAGAAGTTGGTCTTTCCTGC 175322 Query 33338 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCC 33397 || || || || |||||||| || || || ||||| | ||||| | || | | | Sbjct 175321 CAGGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTCGCCTTGTAG-TACTTCTCGTTAC 175263 Query 33398 CAATTCAGAA-ATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAAT 33456 | | ||| | || || || |||||||| || || ||| ||||||| | | Sbjct 175262 CGAGGGAGAGTAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGT 175203 Query 33457 TCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCG 33516 |||| || | || | ||||| ||| |||| | || ||||| || ||||| || | Sbjct 175202 TCATGCCGAGCAGCGCACAGGGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGGAGACAG 175143 Query 33517 CATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACA 33576 | | || || | | |||| | | || || | ||| | || || | Sbjct 175142 CCTCGGTAATGACGTCTTGGACGGCCTGCTTGCTTGGGCGGTGTCTAAGGTGGGAGAAGA 175083 Query 33577 TCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACG 33636 | || ||||| || ||| ||||||||||| | || | ||||| || || | Sbjct 175082 GGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGG 175023 Query 33637 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAA 33696 | || |||| ||| ||||||||||| || ||||| || ||||| ||||| || ||||| | Sbjct 175022 TCAGGCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGA 174963 Query 33697 AGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGT 33753 ||||||| || || || || || ||||||| || | || | | || | ||| Sbjct 174962 AGAAGATACCCTCAACGGCGGCGAAGGCAACGAGGCGCTGAGCGAAGGTGGAATCCTTGT 174903 Query 33754 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGG 33813 | || |||||| | ||||| ||||||||||| || | ||||| || || || |||| Sbjct 174902 CTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGATGG 174843 Query 33814 CATTAAAGAGATA 33826 |||| ||||| || Sbjct 174842 CATTGAAGAGGTA 174830 >seq71 Length=14946 Score = 129 bits (142), Expect = 7e-25 Identities = 363/553 (66%), Gaps = 6/553 (1%) Strand=Plus/Plus Query 33278 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33337 ||| || || | |||||||| || | ||||| || || || || || || |||||| | Sbjct 12205 CATGACACCAGTCTTTTGGTAGTCGGCGACACGCTTCTCAAAGAAGTTGGTCTTTCCTGC 12264 Query 33338 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCC 33397 || || || || |||||||| || || || ||||| | ||||| | || | | | Sbjct 12265 CAGGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTCGCCTTGTAG-TACTTCTCGTTAC 12323 Query 33398 CAATTCAGAA-ATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAAT 33456 | | ||| | || || || |||||||| || || ||| ||||||| | | Sbjct 12324 CGAGGGAGAGTAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGT 12383 Query 33457 TCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCG 33516 |||| || | || | ||||| ||| |||| | || ||||| || ||||| || | Sbjct 12384 TCATGCCGAGCAGCGCACAGGGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGGAGACAG 12443 Query 33517 CATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACA 33576 | | || || | | |||| | | || || | ||| | || || | Sbjct 12444 CCTCGGTAATGACGTCTTGGACGGCCTGCTTGCTTGGGCGGTGTCTAAGGTGGGAGAAGA 12503 Query 33577 TCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACG 33636 | || ||||| || ||| ||||||||||| | || | ||||| || || | Sbjct 12504 GGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGG 12563 Query 33637 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAA 33696 | || |||| ||| ||||||||||| || ||||| || ||||| ||||| || ||||| | Sbjct 12564 TCAGGCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGA 12623 Query 33697 AGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGT 33753 ||||||| || || || | || ||||||| || | || | | || | ||| Sbjct 12624 AGAAGATACCCTCAAC-GGGGCGAAGGCAACGAGGCGCTGAGCGAAGGTGGAATCCTTGT 12682 Query 33754 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGG 33813 | || |||||| | ||||| ||||||||||| || | ||||| || || || |||| Sbjct 12683 CTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGATGG 12742 Query 33814 CATTAAAGAGATA 33826 |||| ||||| || Sbjct 12743 CATTGAAGAGGTA 12755 >seq25 Length=557695 Score = 118 bits (130), Expect = 1e-21 Identities = 150/206 (73%), Gaps = 3/206 (1%) Strand=Plus/Plus Query 33624 TCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCG 33683 ||||| || || || || || | ||| ||||||||||| || ||||| || || || ||| Sbjct 29598 TCGTTCGAGAAGGTCAGACCAGCCATGAGGCCACGCTTGTTGAGCCAGAAAATAGAGGCG 29657 Query 33684 AATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA- 33742 || || ||||| |||||||| || || || ||||| ||||||| || | || || | Sbjct 29658 AAGGAGCCGGAGAAGAAGATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCAAAG 29717 Query 33743 --ACCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 33800 | | |||| ||||||||| | ||||| ||||||||||| || | ||||| Sbjct 29718 GTAGAATCCTTGTCTTGTATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGA 29777 Query 33801 ATCGTTTCTATGGCATTAAAGAGATA 33826 || || || |||||||| ||||| || Sbjct 29778 ATGGTCTCAATGGCATTGAAGAGGTA 29803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629816946564240