Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016
-05-10] 83 sequences; 35,818,201 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq28 187 3e-42
seq3 136 5e-27
seq71 129 7e-25
seq25 118 1e-21
>seq28
Length=369090
Score = 187 bits (206), Expect = 3e-42
Identities = 396/591 (67%), Gaps = 0/591 (0%)
Strand=Plus/Plus
Query 63214 CCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 63273
|||||| ||| ||||| | || ||||| | | ||| | |||| | || || || |
Sbjct 127000 CCAATCCAGGGCATTCGTTGGGGCACATGAGAGTCCAGGCGCCGTTCTTCTCAACACGCT 127059
Query 63274 TCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGT 63333
|||| |||||||| || ||||| ||||| ||||| || | | | |||||| |
Sbjct 127060 TCATGAAGAGATCCGGGATCCAGAGAGCGTAGAATAGGTCACGGGCACGGACTTCCTCCT 127119
Query 63334 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 63393
| || |||||| | | || |||||| | | | ||| | |||||| || || | ||
Sbjct 127120 TGCCGTGGTTCTTTCTCAAGTCCAGGAACTCAAAGACATCCGCATGCCATGGCTCAACGT 127179
Query 63394 ATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 63453
| ||||| | | | || || || ||||| || ||||| || | ||| || |||||||| |
Sbjct 127180 AGATGGCGAAAGCACCGGGTCGCTTGTTACCACCCTGGTCAACGTACCTCGCGGTGTTGT 127239
Query 63454 TATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGC 63513
| | || | | ||| |||| |||||||| || | ||||||||||||| || ||
Sbjct 127240 TGAAGACGCGGAGCATGGGAACGATACCGTTCGAGTTTCCATTGGTACCGGCAATGTATG 127299
Query 63514 CTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63573
| ||| ||||||| ||| | || || || || || || || | || ||||| |
Sbjct 127300 CACCAGTGGCACGGATACGATGGATGTTTAATCCGATACCTCCAGCAGTCTTTGAGATCA 127359
Query 63574 ATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTA 63633
|| ||| || | |||||||||||| || || || ||||| || |||||| | |
Sbjct 127360 TGGCACATGTCTTGAGCGTGTCATAGATACCCTCAATACTATCCTCCTTCATGTCGACCA 127419
Query 63634 GAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 63693
|| ||| |||| ||| | | || || ||||| || | || || |||||||
Sbjct 127420 AGAAGCAGGATGACAGCTGGGCCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAAGCGT 127479
Query 63694 GCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATT 63753
| || || |||| ||| | || ||||| ||||| | | || ||||||
Sbjct 127480 GTGTGAAGTATTTGGAAGACATGAGGTTGTATGTCTCGGTTGTCTTCTCAATATCCTCGC 127539
Query 63754 GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAA 63804
||||| || || || |||||||| | ||||||||| ||||| ||| |||
Sbjct 127540 CGTGAATGCCCACCGCAACACGCATAATCATGTGCTGTGGTCTCTCAGCAA 127590
>seq3
Length=1861714
Score = 136 bits (150), Expect = 5e-27
Identities = 364/553 (66%), Gaps = 5/553 (1%)
Strand=Plus/Minus
Query 33278 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33337
||| || || | |||||||| || | ||||| || || || || || || |||||| |
Sbjct 165525 CATGACACCAGTCTTTTGGTAGTCGGCGACACGCTTCTCAAAGAAGTTGGTCTTTCCTGC 165466
Query 33338 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCC 33397
|| || || || |||||||| || || || ||||| | ||||| | || | | |
Sbjct 165465 CAGGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTCGCCTTGTAG-TACTTCTCGTTAC 165407
Query 33398 CAATTCAGAA-ATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAAT 33456
| | ||| | || || || |||||||| || || ||| ||||||| | |
Sbjct 165406 CGAGGGAGAGTAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGT 165347
Query 33457 TCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCG 33516
|||| || | || | ||||| ||| |||| | || ||||| || ||||| || |
Sbjct 165346 TCATGCCGAGCAGCGCACAGGGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGGAGACAG 165287
Query 33517 CATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACA 33576
| | || || | | |||| | | || || | ||| | || || |
Sbjct 165286 CCTCGGTAATGACGTCTTGGACGGCCTGCTTGCTTGGGCGGTGTCTAAGGTGGGAGAAGA 165227
Query 33577 TCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACG 33636
| || ||||| || ||| ||||||||||| | || | ||||| || || |
Sbjct 165226 GGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGG 165167
Query 33637 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAA 33696
| || |||| ||| ||||||||||| || ||||| || ||||| ||||| || ||||| |
Sbjct 165166 TCAGGCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGA 165107
Query 33697 AGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGT 33753
||||||| || || || || || ||||||| || | || | | || | |||
Sbjct 165106 AGAAGATACCCTCAACGGCGGCGAAGGCAACGAGGCGCTGAGCGAAGGTGGAATCCTTGT 165047
Query 33754 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGG 33813
| || |||||| | ||||| ||||||||||| || | ||||| || || || ||||
Sbjct 165046 CTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGATGG 164987
Query 33814 CATTAAAGAGATA 33826
|||| ||||| ||
Sbjct 164986 CATTGAAGAGGTA 164974
Score = 136 bits (150), Expect = 5e-27
Identities = 364/553 (66%), Gaps = 5/553 (1%)
Strand=Plus/Minus
Query 33278 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33337
||| || || | |||||||| || | ||||| || || || || || || |||||| |
Sbjct 175381 CATGACACCAGTCTTTTGGTAGTCGGCGACACGCTTCTCAAAGAAGTTGGTCTTTCCTGC 175322
Query 33338 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCC 33397
|| || || || |||||||| || || || ||||| | ||||| | || | | |
Sbjct 175321 CAGGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTCGCCTTGTAG-TACTTCTCGTTAC 175263
Query 33398 CAATTCAGAA-ATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAAT 33456
| | ||| | || || || |||||||| || || ||| ||||||| | |
Sbjct 175262 CGAGGGAGAGTAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGT 175203
Query 33457 TCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCG 33516
|||| || | || | ||||| ||| |||| | || ||||| || ||||| || |
Sbjct 175202 TCATGCCGAGCAGCGCACAGGGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGGAGACAG 175143
Query 33517 CATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACA 33576
| | || || | | |||| | | || || | ||| | || || |
Sbjct 175142 CCTCGGTAATGACGTCTTGGACGGCCTGCTTGCTTGGGCGGTGTCTAAGGTGGGAGAAGA 175083
Query 33577 TCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACG 33636
| || ||||| || ||| ||||||||||| | || | ||||| || || |
Sbjct 175082 GGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGG 175023
Query 33637 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAA 33696
| || |||| ||| ||||||||||| || ||||| || ||||| ||||| || ||||| |
Sbjct 175022 TCAGGCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGA 174963
Query 33697 AGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGT 33753
||||||| || || || || || ||||||| || | || | | || | |||
Sbjct 174962 AGAAGATACCCTCAACGGCGGCGAAGGCAACGAGGCGCTGAGCGAAGGTGGAATCCTTGT 174903
Query 33754 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGG 33813
| || |||||| | ||||| ||||||||||| || | ||||| || || || ||||
Sbjct 174902 CTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGATGG 174843
Query 33814 CATTAAAGAGATA 33826
|||| ||||| ||
Sbjct 174842 CATTGAAGAGGTA 174830
>seq71
Length=14946
Score = 129 bits (142), Expect = 7e-25
Identities = 363/553 (66%), Gaps = 6/553 (1%)
Strand=Plus/Plus
Query 33278 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33337
||| || || | |||||||| || | ||||| || || || || || || |||||| |
Sbjct 12205 CATGACACCAGTCTTTTGGTAGTCGGCGACACGCTTCTCAAAGAAGTTGGTCTTTCCTGC 12264
Query 33338 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCC 33397
|| || || || |||||||| || || || ||||| | ||||| | || | | |
Sbjct 12265 CAGGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTCGCCTTGTAG-TACTTCTCGTTAC 12323
Query 33398 CAATTCAGAA-ATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAAT 33456
| | ||| | || || || |||||||| || || ||| ||||||| | |
Sbjct 12324 CGAGGGAGAGTAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGT 12383
Query 33457 TCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCG 33516
|||| || | || | ||||| ||| |||| | || ||||| || ||||| || |
Sbjct 12384 TCATGCCGAGCAGCGCACAGGGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGGAGACAG 12443
Query 33517 CATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACA 33576
| | || || | | |||| | | || || | ||| | || || |
Sbjct 12444 CCTCGGTAATGACGTCTTGGACGGCCTGCTTGCTTGGGCGGTGTCTAAGGTGGGAGAAGA 12503
Query 33577 TCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACG 33636
| || ||||| || ||| ||||||||||| | || | ||||| || || |
Sbjct 12504 GGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGG 12563
Query 33637 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAA 33696
| || |||| ||| ||||||||||| || ||||| || ||||| ||||| || ||||| |
Sbjct 12564 TCAGGCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGA 12623
Query 33697 AGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGT 33753
||||||| || || || | || ||||||| || | || | | || | |||
Sbjct 12624 AGAAGATACCCTCAAC-GGGGCGAAGGCAACGAGGCGCTGAGCGAAGGTGGAATCCTTGT 12682
Query 33754 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGG 33813
| || |||||| | ||||| ||||||||||| || | ||||| || || || ||||
Sbjct 12683 CTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGATGG 12742
Query 33814 CATTAAAGAGATA 33826
|||| ||||| ||
Sbjct 12743 CATTGAAGAGGTA 12755
>seq25
Length=557695
Score = 118 bits (130), Expect = 1e-21
Identities = 150/206 (73%), Gaps = 3/206 (1%)
Strand=Plus/Plus
Query 33624 TCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCG 33683
||||| || || || || || | ||| ||||||||||| || ||||| || || || |||
Sbjct 29598 TCGTTCGAGAAGGTCAGACCAGCCATGAGGCCACGCTTGTTGAGCCAGAAAATAGAGGCG 29657
Query 33684 AATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA- 33742
|| || ||||| |||||||| || || || ||||| ||||||| || | || || |
Sbjct 29658 AAGGAGCCGGAGAAGAAGATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCAAAG 29717
Query 33743 --ACCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 33800
| | |||| ||||||||| | ||||| ||||||||||| || | |||||
Sbjct 29718 GTAGAATCCTTGTCTTGTATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGA 29777
Query 33801 ATCGTTTCTATGGCATTAAAGAGATA 33826
|| || || |||||||| ||||| ||
Sbjct 29778 ATGGTCTCAATGGCATTGAAGAGGTA 29803
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629816946564240
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