Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016
-05-10] 83 sequences; 35,818,201 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq3 113 6e-20
seq71 104 3e-17
seq25 102 1e-16
>seq3
Length=1861714
Score = 113 bits (124), Expect = 6e-20
Identities = 174/248 (70%), Gaps = 3/248 (1%)
Strand=Plus/Minus
Query 36158 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 36217
|| ||||| || ||| ||||||||||| | || | ||||| || || || ||
Sbjct 165221 CAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGGTCAGG 165162
Query 36218 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 36277
|||| ||| ||||||||||| || ||||| || ||||| || || || || || |||||
Sbjct 165161 CCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGAAGAAG 165102
Query 36278 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATGT 36334
|| || || || || || ||||||| || | || | | || | |||| ||
Sbjct 165101 ATACCCTCAACGGCGGCGAAGGCAACGAGGCGCTGAGCGAAGGTGGAATCCTTGTCTTGG 165042
Query 36335 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 36394
|||||| | ||||| ||||||||||| || | ||||| || ||||| || |||||
Sbjct 165041 ATCCACCTAACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGATGGCATTG 164982
Query 36395 AAGAGATA 36402
||||| ||
Sbjct 164981 AAGAGGTA 164974
Score = 113 bits (124), Expect = 6e-20
Identities = 174/248 (70%), Gaps = 3/248 (1%)
Strand=Plus/Minus
Query 36158 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 36217
|| ||||| || ||| ||||||||||| | || | ||||| || || || ||
Sbjct 175077 CAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGGTCAGG 175018
Query 36218 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 36277
|||| ||| ||||||||||| || ||||| || ||||| || || || || || |||||
Sbjct 175017 CCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGAAGAAG 174958
Query 36278 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATGT 36334
|| || || || || || ||||||| || | || | | || | |||| ||
Sbjct 174957 ATACCCTCAACGGCGGCGAAGGCAACGAGGCGCTGAGCGAAGGTGGAATCCTTGTCTTGG 174898
Query 36335 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 36394
|||||| | ||||| ||||||||||| || | ||||| || ||||| || |||||
Sbjct 174897 ATCCACCTAACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGATGGCATTG 174838
Query 36395 AAGAGATA 36402
||||| ||
Sbjct 174837 AAGAGGTA 174830
>seq71
Length=14946
Score = 104 bits (114), Expect = 3e-17
Identities = 173/248 (70%), Gaps = 4/248 (2%)
Strand=Plus/Plus
Query 36158 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 36217
|| ||||| || ||| ||||||||||| | || | ||||| || || || ||
Sbjct 12509 CAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGGTCAGG 12568
Query 36218 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 36277
|||| ||| ||||||||||| || ||||| || ||||| || || || || || |||||
Sbjct 12569 CCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGAAGAAG 12628
Query 36278 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATGT 36334
|| || || || | || ||||||| || | || | | || | |||| ||
Sbjct 12629 ATACCCTCAAC-GGGGCGAAGGCAACGAGGCGCTGAGCGAAGGTGGAATCCTTGTCTTGG 12687
Query 36335 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 36394
|||||| | ||||| ||||||||||| || | ||||| || ||||| || |||||
Sbjct 12688 ATCCACCTAACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGATGGCATTG 12747
Query 36395 AAGAGATA 36402
||||| ||
Sbjct 12748 AAGAGGTA 12755
>seq25
Length=557695
Score = 102 bits (112), Expect = 1e-16
Identities = 248/372 (67%), Gaps = 8/372 (2%)
Strand=Plus/Plus
Query 36200 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA 36259
||||| || || || || || | ||| ||||||||||| || ||||| || || || ||
Sbjct 29598 TCGTTCGAGAAGGTCAGACCAGCCATGAGGCCACGCTTGTTGAGCCAGAAAATAGAGGCG 29657
Query 36260 AATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA- 36318
|| || || || ||||| || || || || || || ||||||| || | || || |
Sbjct 29658 AAGGAGCCGGAGAAGAAGATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCAAAG 29717
Query 36319 --ACCGGCACTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 36376
| | |||| ||||||||| | ||||| ||||||||||| || | |||||
Sbjct 29718 GTAGAATCCTTGTCTTGTATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGA 29777
Query 36377 ATTGTCTCTATAGCATTAAAGAGATAGtttttttCA--TTACTATCTTTAACATATGTAT 36434
|| ||||| || ||||| ||||| || | || | |||| || || | ||||| |
Sbjct 29778 ATGGTCTCAATGGCATTGAAGAGGTATGTGCGTTGAGCTTAC--TCCTTGATGTATGTGT 29835
Query 36435 CAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGA 36494
| || | || || | || | |||||||| || || ||||| || |||||||
Sbjct 29836 CGATGAGGAGGAAGTATGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGA 29895
Query 36495 A-ACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTC 36553
| ||| | || || | || || ||||| | | || || || | || || ||
Sbjct 29896 AGACAGCGGGCTTCTGGGATTTGGACTTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTG 29955
Query 36554 ACTATTCCGTCA 36565
|| |||||||||
Sbjct 29956 ACAATTCCGTCA 29967
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658172117145720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |