Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016
-05-10] 83 sequences; 35,818,201 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq3 136 6e-27
seq71 129 8e-25
seq25 116 5e-21
>seq3
Length=1861714
Score = 136 bits (150), Expect = 6e-27
Identities = 364/553 (66%), Gaps = 5/553 (1%)
Strand=Plus/Minus
Query 49656 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 49715
||| || || | |||||||| || | ||||| || || || || || || |||||| |
Sbjct 165525 CATGACACCAGTCTTTTGGTAGTCGGCGACACGCTTCTCAAAGAAGTTGGTCTTTCCTGC 165466
Query 49716 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 49775
|| || || || |||||||| || || || ||||| | || || | || | | |
Sbjct 165465 CAGGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTCGCCTTGTAG-TACTTCTCGTTAC 165407
Query 49776 CAATTCAGAA-ATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAAT 49834
| | ||| | || || || ||||| || || || ||| ||||||| | |
Sbjct 165406 CGAGGGAGAGTAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGT 165347
Query 49835 TCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCG 49894
|||| || | || | ||||| ||| |||| | || ||||| || ||||| || |
Sbjct 165346 TCATGCCGAGCAGCGCACAGGGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGGAGACAG 165287
Query 49895 CATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACA 49954
| || || || | | |||| | | || || | || | || || |
Sbjct 165286 CCTCGGTAATGACGTCTTGGACGGCCTGCTTGCTTGGGCGGTGTCTAAGGTGGGAGAAGA 165227
Query 49955 TCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACG 50014
| || ||||| || ||| ||||||||||| | || || ||||| || || |
Sbjct 165226 GGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGG 165167
Query 50015 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAA 50074
| || |||| ||| ||||||||||| || ||||| || ||||| || || || || || |
Sbjct 165166 TCAGGCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGA 165107
Query 50075 AGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGT 50131
||||||| || || || ||||| |||||||| || | || | | ||| | |||
Sbjct 165106 AGAAGATACCCTCAACGGCGGCGAAGGCAACGAGGCGCTGAGCGAAGGTGGAATCCTTGT 165047
Query 50132 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGG 50191
| || |||||| | ||||| ||||||||||| || | ||||| || || || ||||
Sbjct 165046 CTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGATGG 164987
Query 50192 CATTAAAGAGATA 50204
|||| ||||| ||
Sbjct 164986 CATTGAAGAGGTA 164974
Score = 136 bits (150), Expect = 6e-27
Identities = 364/553 (66%), Gaps = 5/553 (1%)
Strand=Plus/Minus
Query 49656 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 49715
||| || || | |||||||| || | ||||| || || || || || || |||||| |
Sbjct 175381 CATGACACCAGTCTTTTGGTAGTCGGCGACACGCTTCTCAAAGAAGTTGGTCTTTCCTGC 175322
Query 49716 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 49775
|| || || || |||||||| || || || ||||| | || || | || | | |
Sbjct 175321 CAGGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTCGCCTTGTAG-TACTTCTCGTTAC 175263
Query 49776 CAATTCAGAA-ATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAAT 49834
| | ||| | || || || ||||| || || || ||| ||||||| | |
Sbjct 175262 CGAGGGAGAGTAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGT 175203
Query 49835 TCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCG 49894
|||| || | || | ||||| ||| |||| | || ||||| || ||||| || |
Sbjct 175202 TCATGCCGAGCAGCGCACAGGGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGGAGACAG 175143
Query 49895 CATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACA 49954
| || || || | | |||| | | || || | || | || || |
Sbjct 175142 CCTCGGTAATGACGTCTTGGACGGCCTGCTTGCTTGGGCGGTGTCTAAGGTGGGAGAAGA 175083
Query 49955 TCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACG 50014
| || ||||| || ||| ||||||||||| | || || ||||| || || |
Sbjct 175082 GGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGG 175023
Query 50015 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAA 50074
| || |||| ||| ||||||||||| || ||||| || ||||| || || || || || |
Sbjct 175022 TCAGGCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGA 174963
Query 50075 AGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGT 50131
||||||| || || || ||||| |||||||| || | || | | ||| | |||
Sbjct 174962 AGAAGATACCCTCAACGGCGGCGAAGGCAACGAGGCGCTGAGCGAAGGTGGAATCCTTGT 174903
Query 50132 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGG 50191
| || |||||| | ||||| ||||||||||| || | ||||| || || || ||||
Sbjct 174902 CTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGATGG 174843
Query 50192 CATTAAAGAGATA 50204
|||| ||||| ||
Sbjct 174842 CATTGAAGAGGTA 174830
>seq71
Length=14946
Score = 129 bits (142), Expect = 8e-25
Identities = 363/553 (66%), Gaps = 6/553 (1%)
Strand=Plus/Plus
Query 49656 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 49715
||| || || | |||||||| || | ||||| || || || || || || |||||| |
Sbjct 12205 CATGACACCAGTCTTTTGGTAGTCGGCGACACGCTTCTCAAAGAAGTTGGTCTTTCCTGC 12264
Query 49716 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 49775
|| || || || |||||||| || || || ||||| | || || | || | | |
Sbjct 12265 CAGGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTCGCCTTGTAG-TACTTCTCGTTAC 12323
Query 49776 CAATTCAGAA-ATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAAT 49834
| | ||| | || || || ||||| || || || ||| ||||||| | |
Sbjct 12324 CGAGGGAGAGTAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGT 12383
Query 49835 TCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCG 49894
|||| || | || | ||||| ||| |||| | || ||||| || ||||| || |
Sbjct 12384 TCATGCCGAGCAGCGCACAGGGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGGAGACAG 12443
Query 49895 CATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACA 49954
| || || || | | |||| | | || || | || | || || |
Sbjct 12444 CCTCGGTAATGACGTCTTGGACGGCCTGCTTGCTTGGGCGGTGTCTAAGGTGGGAGAAGA 12503
Query 49955 TCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACG 50014
| || ||||| || ||| ||||||||||| | || || ||||| || || |
Sbjct 12504 GGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGG 12563
Query 50015 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAA 50074
| || |||| ||| ||||||||||| || ||||| || ||||| || || || || || |
Sbjct 12564 TCAGGCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGA 12623
Query 50075 AGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGT 50131
||||||| || || || | ||| |||||||| || | || | | ||| | |||
Sbjct 12624 AGAAGATACCCTCAAC-GGGGCGAAGGCAACGAGGCGCTGAGCGAAGGTGGAATCCTTGT 12682
Query 50132 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGG 50191
| || |||||| | ||||| ||||||||||| || | ||||| || || || ||||
Sbjct 12683 CTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGATGG 12742
Query 50192 CATTAAAGAGATA 50204
|||| ||||| ||
Sbjct 12743 CATTGAAGAGGTA 12755
>seq25
Length=557695
Score = 116 bits (128), Expect = 5e-21
Identities = 177/249 (71%), Gaps = 5/249 (2%)
Strand=Plus/Plus
Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTA-ATTAGTTCGTTGGAAAACGTGAG 50018
|| ||||| || ||| || ||||||| | | | || || ||||| || || || ||
Sbjct 29556 CAGGCGAAGTCAGTGTGGAGGCCCTCGT-TATGGGATATGAGCTCGTTCGAGAAGGTCAG 29614
Query 50019 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAA 50078
|| | ||| ||||||||||| || ||||| || || || || || || || || |||||
Sbjct 29615 ACCAGCCATGAGGCCACGCTTGTTGAGCCAGAAAATAGAGGCGAAGGAGCCGGAGAAGAA 29674
Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATG 50135
||| || || || || || |||||||| || | || || | | | | |||| ||
Sbjct 29675 GATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCAAAGGTAGAATCCTTGTCTTG 29734
Query 50136 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 50195
||||||| | ||||| ||||||||||| || | ||||| || || || ||||||||
Sbjct 29735 TATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCAATGGCATT 29794
Query 50196 AAAGAGATA 50204
||||| ||
Sbjct 29795 GAAGAGGTA 29803
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718268054796120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |