Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016
-05-10] 83 sequences; 35,818,201 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq3 120 4e-22
seq25 114 2e-20
seq71 113 6e-20
>seq3
Length=1861714
Score = 120 bits (132), Expect = 4e-22
Identities = 552/866 (64%), Gaps = 16/866 (2%)
Strand=Plus/Minus
Query 41761 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTC 41820
||| || || | |||||||| || | ||||| || || || || || ||||||||| |
Sbjct 165525 CATGACACCAGTCTTTTGGTAGTCGGCGACACGCTTCTCAAAGAAGTTGGTCTTTCCTGC 165466
Query 41821 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 41880
|| || || || |||||||| || || || ||||| | || || | || | | |
Sbjct 165465 CAGGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTCGCCTTGTAG-TACTTCTCGTTAC 165407
Query 41881 CAATTCAGAA-ATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAAT 41939
| | ||| | || || || |||| ||| || || ||| ||||||| | |
Sbjct 165406 CGAGGGAGAGTAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGT 165347
Query 41940 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 41999
|||| || | || | ||||| ||| |||| | || ||||| || || ||||| |
Sbjct 165346 TCATGCCGAGCAGCGCACAGGGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGGAGACAG 165287
Query 42000 CGTCTGTTATAATAGATCTT--ACTGTTT-CTTCACTCGGTGGATACAATAAATGTTTAA 42056
| || || || | |||| || | | ||| | || || | | | || |
Sbjct 165286 CCTCGGTAATGACG--TCTTGGACGGCCTGCTTGCTTGGGCGGTGTCTA-AGGTGGGAGA 165230
Query 42057 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAA 42116
| | | || ||||| || ||| |||||||| || | || | ||||| || |
Sbjct 165229 AGAGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGA 165170
Query 42117 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAG 42176
| || || |||| ||| ||||||||||| || ||||| || || || || || || || |
Sbjct 165169 AGGTCAGGCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGG 165110
Query 42177 AAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CAC 42233
| |||||||| || || || || || ||||||| || | || | | || |
Sbjct 165109 AGAAGAAGATACCCTCAACGGCGGCGAAGGCAACGAGGCGCTGAGCGAAGGTGGAATCCT 165050
Query 42234 TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTA 42293
|||| || |||||| | ||||| ||||||||||| || | ||||| || || || |
Sbjct 165049 TGTCTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGA 164990
Query 42294 TGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGAC 42353
||||||| ||||| || | || | || || | ||||| ||||| | ||
Sbjct 164989 TGGCATTGAAGAGGTATGTGCGTTGAGCTTGTTCCTTGATGTATGTGTCGATGAGGAGGG 164930
Query 42354 TATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCT 42413
|| | || | |||||||| || || || || || |||||||| || | ||| |
Sbjct 164929 AGTATGTCTCGGCGTGAATGTTCTCTATCATGATTTGGAAACCGTAGAAGCAGCGGGCTT 164870
Query 42414 CGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCAC 42473
| | | || || || | | || || || | ||| ||||| || ||||||||
Sbjct 164869 CTGGGATTTGGACCTCGCTGCTGAAGCGCTCGAGGAGATTCTCGTTGACAATTCCGTCTG 164810
Query 42474 TGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAA----T 42529
|| || || || || | || || || || || || | || || |
Sbjct 164809 ACGCGGCGAAGAAAGCGAGAACGTGGGAAATGAAGTAACGCTCAT-CGTCATTGAGGCGG 164751
Query 42530 TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCT 42589
|| ||||| || | | || || || | ||| | || ||| ||||||| || || |||
Sbjct 164750 TTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCCGTCCAGAAAGACGCT 164691
Query 42590 TCTGCCTTTTTATACATATTCCAGAT 42615
|||||||| || ||||| | ||||||
Sbjct 164690 TCTGCCTTCTTGTACATCTGCCAGAT 164665
Score = 120 bits (132), Expect = 4e-22
Identities = 552/866 (64%), Gaps = 16/866 (2%)
Strand=Plus/Minus
Query 41761 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTC 41820
||| || || | |||||||| || | ||||| || || || || || ||||||||| |
Sbjct 175381 CATGACACCAGTCTTTTGGTAGTCGGCGACACGCTTCTCAAAGAAGTTGGTCTTTCCTGC 175322
Query 41821 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 41880
|| || || || |||||||| || || || ||||| | || || | || | | |
Sbjct 175321 CAGGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTCGCCTTGTAG-TACTTCTCGTTAC 175263
Query 41881 CAATTCAGAA-ATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAAT 41939
| | ||| | || || || |||| ||| || || ||| ||||||| | |
Sbjct 175262 CGAGGGAGAGTAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGT 175203
Query 41940 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 41999
|||| || | || | ||||| ||| |||| | || ||||| || || ||||| |
Sbjct 175202 TCATGCCGAGCAGCGCACAGGGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGGAGACAG 175143
Query 42000 CGTCTGTTATAATAGATCTT--ACTGTTT-CTTCACTCGGTGGATACAATAAATGTTTAA 42056
| || || || | |||| || | | ||| | || || | | | || |
Sbjct 175142 CCTCGGTAATGACG--TCTTGGACGGCCTGCTTGCTTGGGCGGTGTCTA-AGGTGGGAGA 175086
Query 42057 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAA 42116
| | | || ||||| || ||| |||||||| || | || | ||||| || |
Sbjct 175085 AGAGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGA 175026
Query 42117 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAG 42176
| || || |||| ||| ||||||||||| || ||||| || || || || || || || |
Sbjct 175025 AGGTCAGGCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGG 174966
Query 42177 AAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CAC 42233
| |||||||| || || || || || ||||||| || | || | | || |
Sbjct 174965 AGAAGAAGATACCCTCAACGGCGGCGAAGGCAACGAGGCGCTGAGCGAAGGTGGAATCCT 174906
Query 42234 TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTA 42293
|||| || |||||| | ||||| ||||||||||| || | ||||| || || || |
Sbjct 174905 TGTCTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGA 174846
Query 42294 TGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGAC 42353
||||||| ||||| || | || | || || | ||||| ||||| | ||
Sbjct 174845 TGGCATTGAAGAGGTATGTGCGTTGAGCTTGTTCCTTGATGTATGTGTCGATGAGGAGGG 174786
Query 42354 TATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCT 42413
|| | || | |||||||| || || || || || |||||||| || | ||| |
Sbjct 174785 AGTATGTCTCGGCGTGAATGTTCTCTATCATGATTTGGAAACCGTAGAAGCAGCGGGCTT 174726
Query 42414 CGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCAC 42473
| | | || || || | | || || || | ||| ||||| || ||||||||
Sbjct 174725 CTGGGATTTGGACCTCGCTGCTGAAGCGCTCGAGGAGATTCTCGTTGACAATTCCGTCTG 174666
Query 42474 TGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAA----T 42529
|| || || || || | || || || || || || | || || |
Sbjct 174665 ACGCGGCGAAGAAAGCGAGAACGTGGGAAATGAAGTAACGCTCAT-CGTCATTGAGGCGG 174607
Query 42530 TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCT 42589
|| ||||| || | | || || || | ||| | || ||| ||||||| || || |||
Sbjct 174606 TTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCCGTCCAGAAAGACGCT 174547
Query 42590 TCTGCCTTTTTATACATATTCCAGAT 42615
|||||||| || ||||| | ||||||
Sbjct 174546 TCTGCCTTCTTGTACATCTGCCAGAT 174521
>seq25
Length=557695
Score = 114 bits (126), Expect = 2e-20
Identities = 251/372 (67%), Gaps = 8/372 (2%)
Strand=Plus/Plus
Query 42107 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCA 42166
||||| || || || || || | ||| ||||||||||| || ||||| || ||||| ||
Sbjct 29598 TCGTTCGAGAAGGTCAGACCAGCCATGAGGCCACGCTTGTTGAGCCAGAAAATAGAGGCG 29657
Query 42167 AATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA- 42225
|| || || || |||||||| || || || || || ||||||| || | || || |
Sbjct 29658 AAGGAGCCGGAGAAGAAGATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCAAAG 29717
Query 42226 --ACCGGCACTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 42283
| | |||| ||||||||| | ||||| ||||||||||| || | |||||
Sbjct 29718 GTAGAATCCTTGTCTTGTATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGA 29777
Query 42284 ATCGTTTCTATGGCATTAAAGAGATAGtttttttCA--TTACTATCTTTAACATATGTAT 42341
|| || || |||||||| ||||| || | || | |||| || || | ||||| |
Sbjct 29778 ATGGTCTCAATGGCATTGAAGAGGTATGTGCGTTGAGCTTAC--TCCTTGATGTATGTGT 29835
Query 42342 CGATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGA 42401
|||| | || || | || | |||||||| || || || || || |||||||
Sbjct 29836 CGATGAGGAGGAAGTATGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGA 29895
Query 42402 A-ACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTC 42460
| ||| | ||| || | | || ||||| | | || || || | || |||||
Sbjct 29896 AGACAGCGGGCTTCTGGGATTTGGACTTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTG 29955
Query 42461 ACTATTCCGTCA 42472
|| |||||||||
Sbjct 29956 ACAATTCCGTCA 29967
>seq71
Length=14946
Score = 113 bits (124), Expect = 6e-20
Identities = 551/866 (64%), Gaps = 17/866 (2%)
Strand=Plus/Plus
Query 41761 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTC 41820
||| || || | |||||||| || | ||||| || || || || || ||||||||| |
Sbjct 12205 CATGACACCAGTCTTTTGGTAGTCGGCGACACGCTTCTCAAAGAAGTTGGTCTTTCCTGC 12264
Query 41821 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 41880
|| || || || |||||||| || || || ||||| | || || | || | | |
Sbjct 12265 CAGGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTCGCCTTGTAG-TACTTCTCGTTAC 12323
Query 41881 CAATTCAGAA-ATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAAT 41939
| | ||| | || || || |||| ||| || || ||| ||||||| | |
Sbjct 12324 CGAGGGAGAGTAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGT 12383
Query 41940 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 41999
|||| || | || | ||||| ||| |||| | || ||||| || || ||||| |
Sbjct 12384 TCATGCCGAGCAGCGCACAGGGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGGAGACAG 12443
Query 42000 CGTCTGTTATAATAGATCTT--ACTGTTT-CTTCACTCGGTGGATACAATAAATGTTTAA 42056
| || || || | |||| || | | ||| | || || | | | || |
Sbjct 12444 CCTCGGTAATGACG--TCTTGGACGGCCTGCTTGCTTGGGCGGTGTCTA-AGGTGGGAGA 12500
Query 42057 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAA 42116
| | | || ||||| || ||| |||||||| || | || | ||||| || |
Sbjct 12501 AGAGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGA 12560
Query 42117 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAG 42176
| || || |||| ||| ||||||||||| || ||||| || || || || || || || |
Sbjct 12561 AGGTCAGGCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGG 12620
Query 42177 AAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CAC 42233
| |||||||| || || || | || ||||||| || | || | | || |
Sbjct 12621 AGAAGAAGATACCCTCAAC-GGGGCGAAGGCAACGAGGCGCTGAGCGAAGGTGGAATCCT 12679
Query 42234 TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTA 42293
|||| || |||||| | ||||| ||||||||||| || | ||||| || || || |
Sbjct 12680 TGTCTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGA 12739
Query 42294 TGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGAC 42353
||||||| ||||| || | || | || || | ||||| ||||| | ||
Sbjct 12740 TGGCATTGAAGAGGTATGTGCGTTGAGCTTGTTCCTTGATGTATGTGTCGATGAGGAGGG 12799
Query 42354 TATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCT 42413
|| | || | |||||||| || || || || || |||||||| || | ||| |
Sbjct 12800 AGTATGTCTCGGCGTGAATGTTCTCTATCATGATTTGGAAACCGTAGAAGCAGCGGGCTT 12859
Query 42414 CGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCAC 42473
| | | || || || | | || || || | ||| ||||| || ||||||||
Sbjct 12860 CTGGGATTTGGACCTCGCTGCTGAAGCGCTCGAGGAGATTCTCGTTGACAATTCCGTCTG 12919
Query 42474 TGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAA----T 42529
|| || || || || | || || || || || || | || || |
Sbjct 12920 ACGCGGCGAAGAAAGCGAGAACGTGGGAAATGAAGTAACGCTCAT-CGTCATTGAGGCGG 12978
Query 42530 TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCT 42589
|| ||||| || | | || || || | ||| | || ||| ||||||| || || |||
Sbjct 12979 TTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCCGTCCAGAAAGACGCT 13038
Query 42590 TCTGCCTTTTTATACATATTCCAGAT 42615
|||||||| || ||||| | ||||||
Sbjct 13039 TCTGCCTTCTTGTACATCTGCCAGAT 13064
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671138503693080
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