Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016 -05-10] 83 sequences; 35,818,201 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq3 120 4e-22 seq25 114 2e-20 seq71 113 6e-20 >seq3 Length=1861714 Score = 120 bits (132), Expect = 4e-22 Identities = 552/866 (64%), Gaps = 16/866 (2%) Strand=Plus/Minus Query 41761 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTC 41820 ||| || || | |||||||| || | ||||| || || || || || ||||||||| | Sbjct 165525 CATGACACCAGTCTTTTGGTAGTCGGCGACACGCTTCTCAAAGAAGTTGGTCTTTCCTGC 165466 Query 41821 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 41880 || || || || |||||||| || || || ||||| | || || | || | | | Sbjct 165465 CAGGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTCGCCTTGTAG-TACTTCTCGTTAC 165407 Query 41881 CAATTCAGAA-ATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAAT 41939 | | ||| | || || || |||| ||| || || ||| ||||||| | | Sbjct 165406 CGAGGGAGAGTAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGT 165347 Query 41940 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 41999 |||| || | || | ||||| ||| |||| | || ||||| || || ||||| | Sbjct 165346 TCATGCCGAGCAGCGCACAGGGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGGAGACAG 165287 Query 42000 CGTCTGTTATAATAGATCTT--ACTGTTT-CTTCACTCGGTGGATACAATAAATGTTTAA 42056 | || || || | |||| || | | ||| | || || | | | || | Sbjct 165286 CCTCGGTAATGACG--TCTTGGACGGCCTGCTTGCTTGGGCGGTGTCTA-AGGTGGGAGA 165230 Query 42057 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAA 42116 | | | || ||||| || ||| |||||||| || | || | ||||| || | Sbjct 165229 AGAGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGA 165170 Query 42117 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAG 42176 | || || |||| ||| ||||||||||| || ||||| || || || || || || || | Sbjct 165169 AGGTCAGGCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGG 165110 Query 42177 AAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CAC 42233 | |||||||| || || || || || ||||||| || | || | | || | Sbjct 165109 AGAAGAAGATACCCTCAACGGCGGCGAAGGCAACGAGGCGCTGAGCGAAGGTGGAATCCT 165050 Query 42234 TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTA 42293 |||| || |||||| | ||||| ||||||||||| || | ||||| || || || | Sbjct 165049 TGTCTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGA 164990 Query 42294 TGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGAC 42353 ||||||| ||||| || | || | || || | ||||| ||||| | || Sbjct 164989 TGGCATTGAAGAGGTATGTGCGTTGAGCTTGTTCCTTGATGTATGTGTCGATGAGGAGGG 164930 Query 42354 TATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCT 42413 || | || | |||||||| || || || || || |||||||| || | ||| | Sbjct 164929 AGTATGTCTCGGCGTGAATGTTCTCTATCATGATTTGGAAACCGTAGAAGCAGCGGGCTT 164870 Query 42414 CGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCAC 42473 | | | || || || | | || || || | ||| ||||| || |||||||| Sbjct 164869 CTGGGATTTGGACCTCGCTGCTGAAGCGCTCGAGGAGATTCTCGTTGACAATTCCGTCTG 164810 Query 42474 TGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAA----T 42529 || || || || || | || || || || || || | || || | Sbjct 164809 ACGCGGCGAAGAAAGCGAGAACGTGGGAAATGAAGTAACGCTCAT-CGTCATTGAGGCGG 164751 Query 42530 TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCT 42589 || ||||| || | | || || || | ||| | || ||| ||||||| || || ||| Sbjct 164750 TTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCCGTCCAGAAAGACGCT 164691 Query 42590 TCTGCCTTTTTATACATATTCCAGAT 42615 |||||||| || ||||| | |||||| Sbjct 164690 TCTGCCTTCTTGTACATCTGCCAGAT 164665 Score = 120 bits (132), Expect = 4e-22 Identities = 552/866 (64%), Gaps = 16/866 (2%) Strand=Plus/Minus Query 41761 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTC 41820 ||| || || | |||||||| || | ||||| || || || || || ||||||||| | Sbjct 175381 CATGACACCAGTCTTTTGGTAGTCGGCGACACGCTTCTCAAAGAAGTTGGTCTTTCCTGC 175322 Query 41821 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 41880 || || || || |||||||| || || || ||||| | || || | || | | | Sbjct 175321 CAGGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTCGCCTTGTAG-TACTTCTCGTTAC 175263 Query 41881 CAATTCAGAA-ATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAAT 41939 | | ||| | || || || |||| ||| || || ||| ||||||| | | Sbjct 175262 CGAGGGAGAGTAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGT 175203 Query 41940 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 41999 |||| || | || | ||||| ||| |||| | || ||||| || || ||||| | Sbjct 175202 TCATGCCGAGCAGCGCACAGGGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGGAGACAG 175143 Query 42000 CGTCTGTTATAATAGATCTT--ACTGTTT-CTTCACTCGGTGGATACAATAAATGTTTAA 42056 | || || || | |||| || | | ||| | || || | | | || | Sbjct 175142 CCTCGGTAATGACG--TCTTGGACGGCCTGCTTGCTTGGGCGGTGTCTA-AGGTGGGAGA 175086 Query 42057 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAA 42116 | | | || ||||| || ||| |||||||| || | || | ||||| || | Sbjct 175085 AGAGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGA 175026 Query 42117 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAG 42176 | || || |||| ||| ||||||||||| || ||||| || || || || || || || | Sbjct 175025 AGGTCAGGCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGG 174966 Query 42177 AAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CAC 42233 | |||||||| || || || || || ||||||| || | || | | || | Sbjct 174965 AGAAGAAGATACCCTCAACGGCGGCGAAGGCAACGAGGCGCTGAGCGAAGGTGGAATCCT 174906 Query 42234 TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTA 42293 |||| || |||||| | ||||| ||||||||||| || | ||||| || || || | Sbjct 174905 TGTCTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGA 174846 Query 42294 TGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGAC 42353 ||||||| ||||| || | || | || || | ||||| ||||| | || Sbjct 174845 TGGCATTGAAGAGGTATGTGCGTTGAGCTTGTTCCTTGATGTATGTGTCGATGAGGAGGG 174786 Query 42354 TATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCT 42413 || | || | |||||||| || || || || || |||||||| || | ||| | Sbjct 174785 AGTATGTCTCGGCGTGAATGTTCTCTATCATGATTTGGAAACCGTAGAAGCAGCGGGCTT 174726 Query 42414 CGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCAC 42473 | | | || || || | | || || || | ||| ||||| || |||||||| Sbjct 174725 CTGGGATTTGGACCTCGCTGCTGAAGCGCTCGAGGAGATTCTCGTTGACAATTCCGTCTG 174666 Query 42474 TGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAA----T 42529 || || || || || | || || || || || || | || || | Sbjct 174665 ACGCGGCGAAGAAAGCGAGAACGTGGGAAATGAAGTAACGCTCAT-CGTCATTGAGGCGG 174607 Query 42530 TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCT 42589 || ||||| || | | || || || | ||| | || ||| ||||||| || || ||| Sbjct 174606 TTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCCGTCCAGAAAGACGCT 174547 Query 42590 TCTGCCTTTTTATACATATTCCAGAT 42615 |||||||| || ||||| | |||||| Sbjct 174546 TCTGCCTTCTTGTACATCTGCCAGAT 174521 >seq25 Length=557695 Score = 114 bits (126), Expect = 2e-20 Identities = 251/372 (67%), Gaps = 8/372 (2%) Strand=Plus/Plus Query 42107 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCA 42166 ||||| || || || || || | ||| ||||||||||| || ||||| || ||||| || Sbjct 29598 TCGTTCGAGAAGGTCAGACCAGCCATGAGGCCACGCTTGTTGAGCCAGAAAATAGAGGCG 29657 Query 42167 AATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA- 42225 || || || || |||||||| || || || || || ||||||| || | || || | Sbjct 29658 AAGGAGCCGGAGAAGAAGATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCAAAG 29717 Query 42226 --ACCGGCACTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 42283 | | |||| ||||||||| | ||||| ||||||||||| || | ||||| Sbjct 29718 GTAGAATCCTTGTCTTGTATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGA 29777 Query 42284 ATCGTTTCTATGGCATTAAAGAGATAGtttttttCA--TTACTATCTTTAACATATGTAT 42341 || || || |||||||| ||||| || | || | |||| || || | ||||| | Sbjct 29778 ATGGTCTCAATGGCATTGAAGAGGTATGTGCGTTGAGCTTAC--TCCTTGATGTATGTGT 29835 Query 42342 CGATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGA 42401 |||| | || || | || | |||||||| || || || || || ||||||| Sbjct 29836 CGATGAGGAGGAAGTATGTCTCGGCGTGAATGTTCTCGATCATGATTTGGAAACCGTAGA 29895 Query 42402 A-ACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTC 42460 | ||| | ||| || | | || ||||| | | || || || | || ||||| Sbjct 29896 AGACAGCGGGCTTCTGGGATTTGGACTTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTG 29955 Query 42461 ACTATTCCGTCA 42472 || ||||||||| Sbjct 29956 ACAATTCCGTCA 29967 >seq71 Length=14946 Score = 113 bits (124), Expect = 6e-20 Identities = 551/866 (64%), Gaps = 17/866 (2%) Strand=Plus/Plus Query 41761 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTC 41820 ||| || || | |||||||| || | ||||| || || || || || ||||||||| | Sbjct 12205 CATGACACCAGTCTTTTGGTAGTCGGCGACACGCTTCTCAAAGAAGTTGGTCTTTCCTGC 12264 Query 41821 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 41880 || || || || |||||||| || || || ||||| | || || | || | | | Sbjct 12265 CAGGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTCGCCTTGTAG-TACTTCTCGTTAC 12323 Query 41881 CAATTCAGAA-ATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAAT 41939 | | ||| | || || || |||| ||| || || ||| ||||||| | | Sbjct 12324 CGAGGGAGAGTAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGT 12383 Query 41940 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 41999 |||| || | || | ||||| ||| |||| | || ||||| || || ||||| | Sbjct 12384 TCATGCCGAGCAGCGCACAGGGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGGAGACAG 12443 Query 42000 CGTCTGTTATAATAGATCTT--ACTGTTT-CTTCACTCGGTGGATACAATAAATGTTTAA 42056 | || || || | |||| || | | ||| | || || | | | || | Sbjct 12444 CCTCGGTAATGACG--TCTTGGACGGCCTGCTTGCTTGGGCGGTGTCTA-AGGTGGGAGA 12500 Query 42057 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAA 42116 | | | || ||||| || ||| |||||||| || | || | ||||| || | Sbjct 12501 AGAGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGA 12560 Query 42117 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAG 42176 | || || |||| ||| ||||||||||| || ||||| || || || || || || || | Sbjct 12561 AGGTCAGGCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGG 12620 Query 42177 AAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CAC 42233 | |||||||| || || || | || ||||||| || | || | | || | Sbjct 12621 AGAAGAAGATACCCTCAAC-GGGGCGAAGGCAACGAGGCGCTGAGCGAAGGTGGAATCCT 12679 Query 42234 TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTA 42293 |||| || |||||| | ||||| ||||||||||| || | ||||| || || || | Sbjct 12680 TGTCTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGA 12739 Query 42294 TGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGAC 42353 ||||||| ||||| || | || | || || | ||||| ||||| | || Sbjct 12740 TGGCATTGAAGAGGTATGTGCGTTGAGCTTGTTCCTTGATGTATGTGTCGATGAGGAGGG 12799 Query 42354 TATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCT 42413 || | || | |||||||| || || || || || |||||||| || | ||| | Sbjct 12800 AGTATGTCTCGGCGTGAATGTTCTCTATCATGATTTGGAAACCGTAGAAGCAGCGGGCTT 12859 Query 42414 CGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCAC 42473 | | | || || || | | || || || | ||| ||||| || |||||||| Sbjct 12860 CTGGGATTTGGACCTCGCTGCTGAAGCGCTCGAGGAGATTCTCGTTGACAATTCCGTCTG 12919 Query 42474 TGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAA----T 42529 || || || || || | || || || || || || | || || | Sbjct 12920 ACGCGGCGAAGAAAGCGAGAACGTGGGAAATGAAGTAACGCTCAT-CGTCATTGAGGCGG 12978 Query 42530 TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCT 42589 || ||||| || | | || || || | ||| | || ||| ||||||| || || ||| Sbjct 12979 TTGTTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCCGTCCAGAAAGACGCT 13038 Query 42590 TCTGCCTTTTTATACATATTCCAGAT 42615 |||||||| || ||||| | |||||| Sbjct 13039 TCTGCCTTCTTGTACATCTGCCAGAT 13064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138503693080