Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016 -05-10] 83 sequences; 35,818,201 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq28 196 6e-45 seq3 132 6e-26 seq71 123 3e-23 seq25 116 5e-21 >seq28 Length=369090 Score = 196 bits (216), Expect = 6e-45 Identities = 401/596 (67%), Gaps = 0/596 (0%) Strand=Plus/Plus Query 63163 CCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 63222 |||||||||| ||||| | || ||||| | | ||| | |||| | || || || | Sbjct 127000 CCAATCCAGGGCATTCGTTGGGGCACATGAGAGTCCAGGCGCCGTTCTTCTCAACACGCT 127059 Query 63223 TCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGT 63282 |||| |||||||| || ||||| ||||| ||||| || | || | |||||| | Sbjct 127060 TCATGAAGAGATCCGGGATCCAGAGAGCGTAGAATAGGTCACGGGCACGGACTTCCTCCT 127119 Query 63283 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 63342 | || |||||| | | || |||||| | | | ||| | |||||| || || | || Sbjct 127120 TGCCGTGGTTCTTTCTCAAGTCCAGGAACTCAAAGACATCCGCATGCCATGGCTCAACGT 127179 Query 63343 ATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 63402 | ||||| | | | || || || ||||| || ||||| || | ||| || |||||||| | Sbjct 127180 AGATGGCGAAAGCACCGGGTCGCTTGTTACCACCCTGGTCAACGTACCTCGCGGTGTTGT 127239 Query 63403 TATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGC 63462 | | || | | ||| |||| |||||||| || | ||||||||||||| || || Sbjct 127240 TGAAGACGCGGAGCATGGGAACGATACCGTTCGAGTTTCCATTGGTACCGGCAATGTATG 127299 Query 63463 TTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63522 ||| ||||||| ||| | || || || || || || || | || ||||| | Sbjct 127300 CACCAGTGGCACGGATACGATGGATGTTTAATCCGATACCTCCAGCAGTCTTTGAGATCA 127359 Query 63523 ATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTA 63582 || ||| || | |||||||||||||||||| || ||||| || |||||| | | Sbjct 127360 TGGCACATGTCTTGAGCGTGTCATAGATACCCTCAATACTATCCTCCTTCATGTCGACCA 127419 Query 63583 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 63642 || ||| |||| ||| | || || ||||| || | || || ||||||| Sbjct 127420 AGAAGCAGGATGACAGCTGGGCCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAAGCGT 127479 Query 63643 GCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATT 63702 | || || |||| ||| | || ||||| ||||| | | || |||||| Sbjct 127480 GTGTGAAGTATTTGGAAGACATGAGGTTGTATGTCTCGGTTGTCTTCTCAATATCCTCGC 127539 Query 63703 GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 63758 ||||| || || || |||||||| | ||||||||| ||||| ||| | | |||| Sbjct 127540 CGTGAATGCCCACCGCAACACGCATAATCATGTGCTGTGGTCTCTCAGCAACCTTG 127595 >seq3 Length=1861714 Score = 132 bits (146), Expect = 6e-26 Identities = 363/553 (66%), Gaps = 5/553 (1%) Strand=Plus/Minus Query 33000 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33059 ||| || || | |||||||| || | ||||| || || || || || || |||||| | Sbjct 165525 CATGACACCAGTCTTTTGGTAGTCGGCGACACGCTTCTCAAAGAAGTTGGTCTTTCCTGC 165466 Query 33060 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 33119 || || || || |||||||| || || || ||||| | || || | || | | | Sbjct 165465 CAGGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTCGCCTTGTAG-TACTTCTCGTTAC 165407 Query 33120 CAATTCAGAA-ATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAAT 33178 | | ||| | || || || |||||||| || || ||| ||||||| | | Sbjct 165406 CGAGGGAGAGTAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGT 165347 Query 33179 TCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCG 33238 |||| || | || | ||||| ||| |||| | || ||||| || ||||| || | Sbjct 165346 TCATGCCGAGCAGCGCACAGGGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGGAGACAG 165287 Query 33239 CATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACA 33298 | || || || | | |||| | | || || | || | || || | Sbjct 165286 CCTCGGTAATGACGTCTTGGACGGCCTGCTTGCTTGGGCGGTGTCTAAGGTGGGAGAAGA 165227 Query 33299 TCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACG 33358 | || ||||| || ||| ||||||||||| | || || ||||| || || | Sbjct 165226 GGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGG 165167 Query 33359 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAA 33418 | || |||| ||| ||||||||||| || ||||| || ||||| ||||| || || || | Sbjct 165166 TCAGGCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGA 165107 Query 33419 AGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGT 33475 ||||||| || || || || || ||||||| || | || | | || | ||| Sbjct 165106 AGAAGATACCCTCAACGGCGGCGAAGGCAACGAGGCGCTGAGCGAAGGTGGAATCCTTGT 165047 Query 33476 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGG 33535 | || |||||| | ||||| ||||||||||| || | ||||| || || || |||| Sbjct 165046 CTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGATGG 164987 Query 33536 CATTAAAGAGATA 33548 |||| ||||| || Sbjct 164986 CATTGAAGAGGTA 164974 Score = 132 bits (146), Expect = 6e-26 Identities = 363/553 (66%), Gaps = 5/553 (1%) Strand=Plus/Minus Query 33000 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33059 ||| || || | |||||||| || | ||||| || || || || || || |||||| | Sbjct 175381 CATGACACCAGTCTTTTGGTAGTCGGCGACACGCTTCTCAAAGAAGTTGGTCTTTCCTGC 175322 Query 33060 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 33119 || || || || |||||||| || || || ||||| | || || | || | | | Sbjct 175321 CAGGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTCGCCTTGTAG-TACTTCTCGTTAC 175263 Query 33120 CAATTCAGAA-ATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAAT 33178 | | ||| | || || || |||||||| || || ||| ||||||| | | Sbjct 175262 CGAGGGAGAGTAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGT 175203 Query 33179 TCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCG 33238 |||| || | || | ||||| ||| |||| | || ||||| || ||||| || | Sbjct 175202 TCATGCCGAGCAGCGCACAGGGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGGAGACAG 175143 Query 33239 CATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACA 33298 | || || || | | |||| | | || || | || | || || | Sbjct 175142 CCTCGGTAATGACGTCTTGGACGGCCTGCTTGCTTGGGCGGTGTCTAAGGTGGGAGAAGA 175083 Query 33299 TCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACG 33358 | || ||||| || ||| ||||||||||| | || || ||||| || || | Sbjct 175082 GGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGG 175023 Query 33359 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAA 33418 | || |||| ||| ||||||||||| || ||||| || ||||| ||||| || || || | Sbjct 175022 TCAGGCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGA 174963 Query 33419 AGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGT 33475 ||||||| || || || || || ||||||| || | || | | || | ||| Sbjct 174962 AGAAGATACCCTCAACGGCGGCGAAGGCAACGAGGCGCTGAGCGAAGGTGGAATCCTTGT 174903 Query 33476 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGG 33535 | || |||||| | ||||| ||||||||||| || | ||||| || || || |||| Sbjct 174902 CTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGATGG 174843 Query 33536 CATTAAAGAGATA 33548 |||| ||||| || Sbjct 174842 CATTGAAGAGGTA 174830 >seq71 Length=14946 Score = 123 bits (136), Expect = 3e-23 Identities = 362/553 (65%), Gaps = 6/553 (1%) Strand=Plus/Plus Query 33000 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33059 ||| || || | |||||||| || | ||||| || || || || || || |||||| | Sbjct 12205 CATGACACCAGTCTTTTGGTAGTCGGCGACACGCTTCTCAAAGAAGTTGGTCTTTCCTGC 12264 Query 33060 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 33119 || || || || |||||||| || || || ||||| | || || | || | | | Sbjct 12265 CAGGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTCGCCTTGTAG-TACTTCTCGTTAC 12323 Query 33120 CAATTCAGAA-ATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAAT 33178 | | ||| | || || || |||||||| || || ||| ||||||| | | Sbjct 12324 CGAGGGAGAGTAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGT 12383 Query 33179 TCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCG 33238 |||| || | || | ||||| ||| |||| | || ||||| || ||||| || | Sbjct 12384 TCATGCCGAGCAGCGCACAGGGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGGAGACAG 12443 Query 33239 CATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACA 33298 | || || || | | |||| | | || || | || | || || | Sbjct 12444 CCTCGGTAATGACGTCTTGGACGGCCTGCTTGCTTGGGCGGTGTCTAAGGTGGGAGAAGA 12503 Query 33299 TCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACG 33358 | || ||||| || ||| ||||||||||| | || || ||||| || || | Sbjct 12504 GGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGG 12563 Query 33359 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAA 33418 | || |||| ||| ||||||||||| || ||||| || ||||| ||||| || || || | Sbjct 12564 TCAGGCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGA 12623 Query 33419 AGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGT 33475 ||||||| || || || | || ||||||| || | || | | || | ||| Sbjct 12624 AGAAGATACCCTCAAC-GGGGCGAAGGCAACGAGGCGCTGAGCGAAGGTGGAATCCTTGT 12682 Query 33476 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGG 33535 | || |||||| | ||||| ||||||||||| || | ||||| || || || |||| Sbjct 12683 CTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGATGG 12742 Query 33536 CATTAAAGAGATA 33548 |||| ||||| || Sbjct 12743 CATTGAAGAGGTA 12755 >seq25 Length=557695 Score = 116 bits (128), Expect = 5e-21 Identities = 177/249 (71%), Gaps = 5/249 (2%) Strand=Plus/Plus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTA-ATTAGTTCGTTGGAAAACGTGAG 33362 || ||||| || ||| || ||||||| | | | || || ||||| || || || || Sbjct 29556 CAGGCGAAGTCAGTGTGGAGGCCCTCGT-TATGGGATATGAGCTCGTTCGAGAAGGTCAG 29614 Query 33363 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAA 33422 || | ||| ||||||||||| || ||||| || || || ||||| || || || ||||| Sbjct 29615 ACCAGCCATGAGGCCACGCTTGTTGAGCCAGAAAATAGAGGCGAAGGAGCCGGAGAAGAA 29674 Query 33423 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATG 33479 ||| || || || ||||| ||||||| || | || || | | | |||| || Sbjct 29675 GATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCAAAGGTAGAATCCTTGTCTTG 29734 Query 33480 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33539 ||||||| | ||||| ||||||||||| || | ||||| || || || |||||||| Sbjct 29735 TATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCAATGGCATT 29794 Query 33540 AAAGAGATA 33548 ||||| || Sbjct 29795 GAAGAGGTA 29803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946553692280