Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016
-05-10] 83 sequences; 35,818,201 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq28 196 6e-45
seq3 132 6e-26
seq71 123 3e-23
seq25 116 5e-21
>seq28
Length=369090
Score = 196 bits (216), Expect = 6e-45
Identities = 401/596 (67%), Gaps = 0/596 (0%)
Strand=Plus/Plus
Query 63163 CCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 63222
|||||||||| ||||| | || ||||| | | ||| | |||| | || || || |
Sbjct 127000 CCAATCCAGGGCATTCGTTGGGGCACATGAGAGTCCAGGCGCCGTTCTTCTCAACACGCT 127059
Query 63223 TCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGT 63282
|||| |||||||| || ||||| ||||| ||||| || | || | |||||| |
Sbjct 127060 TCATGAAGAGATCCGGGATCCAGAGAGCGTAGAATAGGTCACGGGCACGGACTTCCTCCT 127119
Query 63283 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 63342
| || |||||| | | || |||||| | | | ||| | |||||| || || | ||
Sbjct 127120 TGCCGTGGTTCTTTCTCAAGTCCAGGAACTCAAAGACATCCGCATGCCATGGCTCAACGT 127179
Query 63343 ATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 63402
| ||||| | | | || || || ||||| || ||||| || | ||| || |||||||| |
Sbjct 127180 AGATGGCGAAAGCACCGGGTCGCTTGTTACCACCCTGGTCAACGTACCTCGCGGTGTTGT 127239
Query 63403 TATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGC 63462
| | || | | ||| |||| |||||||| || | ||||||||||||| || ||
Sbjct 127240 TGAAGACGCGGAGCATGGGAACGATACCGTTCGAGTTTCCATTGGTACCGGCAATGTATG 127299
Query 63463 TTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63522
||| ||||||| ||| | || || || || || || || | || ||||| |
Sbjct 127300 CACCAGTGGCACGGATACGATGGATGTTTAATCCGATACCTCCAGCAGTCTTTGAGATCA 127359
Query 63523 ATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTA 63582
|| ||| || | |||||||||||||||||| || ||||| || |||||| | |
Sbjct 127360 TGGCACATGTCTTGAGCGTGTCATAGATACCCTCAATACTATCCTCCTTCATGTCGACCA 127419
Query 63583 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 63642
|| ||| |||| ||| | || || ||||| || | || || |||||||
Sbjct 127420 AGAAGCAGGATGACAGCTGGGCCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAAGCGT 127479
Query 63643 GCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATT 63702
| || || |||| ||| | || ||||| ||||| | | || ||||||
Sbjct 127480 GTGTGAAGTATTTGGAAGACATGAGGTTGTATGTCTCGGTTGTCTTCTCAATATCCTCGC 127539
Query 63703 GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 63758
||||| || || || |||||||| | ||||||||| ||||| ||| | | ||||
Sbjct 127540 CGTGAATGCCCACCGCAACACGCATAATCATGTGCTGTGGTCTCTCAGCAACCTTG 127595
>seq3
Length=1861714
Score = 132 bits (146), Expect = 6e-26
Identities = 363/553 (66%), Gaps = 5/553 (1%)
Strand=Plus/Minus
Query 33000 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33059
||| || || | |||||||| || | ||||| || || || || || || |||||| |
Sbjct 165525 CATGACACCAGTCTTTTGGTAGTCGGCGACACGCTTCTCAAAGAAGTTGGTCTTTCCTGC 165466
Query 33060 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 33119
|| || || || |||||||| || || || ||||| | || || | || | | |
Sbjct 165465 CAGGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTCGCCTTGTAG-TACTTCTCGTTAC 165407
Query 33120 CAATTCAGAA-ATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAAT 33178
| | ||| | || || || |||||||| || || ||| ||||||| | |
Sbjct 165406 CGAGGGAGAGTAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGT 165347
Query 33179 TCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCG 33238
|||| || | || | ||||| ||| |||| | || ||||| || ||||| || |
Sbjct 165346 TCATGCCGAGCAGCGCACAGGGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGGAGACAG 165287
Query 33239 CATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACA 33298
| || || || | | |||| | | || || | || | || || |
Sbjct 165286 CCTCGGTAATGACGTCTTGGACGGCCTGCTTGCTTGGGCGGTGTCTAAGGTGGGAGAAGA 165227
Query 33299 TCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACG 33358
| || ||||| || ||| ||||||||||| | || || ||||| || || |
Sbjct 165226 GGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGG 165167
Query 33359 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAA 33418
| || |||| ||| ||||||||||| || ||||| || ||||| ||||| || || || |
Sbjct 165166 TCAGGCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGA 165107
Query 33419 AGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGT 33475
||||||| || || || || || ||||||| || | || | | || | |||
Sbjct 165106 AGAAGATACCCTCAACGGCGGCGAAGGCAACGAGGCGCTGAGCGAAGGTGGAATCCTTGT 165047
Query 33476 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGG 33535
| || |||||| | ||||| ||||||||||| || | ||||| || || || ||||
Sbjct 165046 CTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGATGG 164987
Query 33536 CATTAAAGAGATA 33548
|||| ||||| ||
Sbjct 164986 CATTGAAGAGGTA 164974
Score = 132 bits (146), Expect = 6e-26
Identities = 363/553 (66%), Gaps = 5/553 (1%)
Strand=Plus/Minus
Query 33000 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33059
||| || || | |||||||| || | ||||| || || || || || || |||||| |
Sbjct 175381 CATGACACCAGTCTTTTGGTAGTCGGCGACACGCTTCTCAAAGAAGTTGGTCTTTCCTGC 175322
Query 33060 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 33119
|| || || || |||||||| || || || ||||| | || || | || | | |
Sbjct 175321 CAGGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTCGCCTTGTAG-TACTTCTCGTTAC 175263
Query 33120 CAATTCAGAA-ATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAAT 33178
| | ||| | || || || |||||||| || || ||| ||||||| | |
Sbjct 175262 CGAGGGAGAGTAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGT 175203
Query 33179 TCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCG 33238
|||| || | || | ||||| ||| |||| | || ||||| || ||||| || |
Sbjct 175202 TCATGCCGAGCAGCGCACAGGGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGGAGACAG 175143
Query 33239 CATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACA 33298
| || || || | | |||| | | || || | || | || || |
Sbjct 175142 CCTCGGTAATGACGTCTTGGACGGCCTGCTTGCTTGGGCGGTGTCTAAGGTGGGAGAAGA 175083
Query 33299 TCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACG 33358
| || ||||| || ||| ||||||||||| | || || ||||| || || |
Sbjct 175082 GGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGG 175023
Query 33359 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAA 33418
| || |||| ||| ||||||||||| || ||||| || ||||| ||||| || || || |
Sbjct 175022 TCAGGCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGA 174963
Query 33419 AGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGT 33475
||||||| || || || || || ||||||| || | || | | || | |||
Sbjct 174962 AGAAGATACCCTCAACGGCGGCGAAGGCAACGAGGCGCTGAGCGAAGGTGGAATCCTTGT 174903
Query 33476 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGG 33535
| || |||||| | ||||| ||||||||||| || | ||||| || || || ||||
Sbjct 174902 CTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGATGG 174843
Query 33536 CATTAAAGAGATA 33548
|||| ||||| ||
Sbjct 174842 CATTGAAGAGGTA 174830
>seq71
Length=14946
Score = 123 bits (136), Expect = 3e-23
Identities = 362/553 (65%), Gaps = 6/553 (1%)
Strand=Plus/Plus
Query 33000 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33059
||| || || | |||||||| || | ||||| || || || || || || |||||| |
Sbjct 12205 CATGACACCAGTCTTTTGGTAGTCGGCGACACGCTTCTCAAAGAAGTTGGTCTTTCCTGC 12264
Query 33060 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 33119
|| || || || |||||||| || || || ||||| | || || | || | | |
Sbjct 12265 CAGGGAGATGTTCTCCATGAAGTCGAATGGGTTGGTCGCCTTGTAG-TACTTCTCGTTAC 12323
Query 33120 CAATTCAGAA-ATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAAT 33178
| | ||| | || || || |||||||| || || ||| ||||||| | |
Sbjct 12324 CGAGGGAGAGTAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGT 12383
Query 33179 TCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCG 33238
|||| || | || | ||||| ||| |||| | || ||||| || ||||| || |
Sbjct 12384 TCATGCCGAGCAGCGCACAGGGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGGAGACAG 12443
Query 33239 CATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACA 33298
| || || || | | |||| | | || || | || | || || |
Sbjct 12444 CCTCGGTAATGACGTCTTGGACGGCCTGCTTGCTTGGGCGGTGTCTAAGGTGGGAGAAGA 12503
Query 33299 TCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACG 33358
| || ||||| || ||| ||||||||||| | || || ||||| || || |
Sbjct 12504 GGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGG 12563
Query 33359 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAA 33418
| || |||| ||| ||||||||||| || ||||| || ||||| ||||| || || || |
Sbjct 12564 TCAGGCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGA 12623
Query 33419 AGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGT 33475
||||||| || || || | || ||||||| || | || | | || | |||
Sbjct 12624 AGAAGATACCCTCAAC-GGGGCGAAGGCAACGAGGCGCTGAGCGAAGGTGGAATCCTTGT 12682
Query 33476 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGG 33535
| || |||||| | ||||| ||||||||||| || | ||||| || || || ||||
Sbjct 12683 CTTGGATCCACCTAACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGATGG 12742
Query 33536 CATTAAAGAGATA 33548
|||| ||||| ||
Sbjct 12743 CATTGAAGAGGTA 12755
>seq25
Length=557695
Score = 116 bits (128), Expect = 5e-21
Identities = 177/249 (71%), Gaps = 5/249 (2%)
Strand=Plus/Plus
Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTA-ATTAGTTCGTTGGAAAACGTGAG 33362
|| ||||| || ||| || ||||||| | | | || || ||||| || || || ||
Sbjct 29556 CAGGCGAAGTCAGTGTGGAGGCCCTCGT-TATGGGATATGAGCTCGTTCGAGAAGGTCAG 29614
Query 33363 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAA 33422
|| | ||| ||||||||||| || ||||| || || || ||||| || || || |||||
Sbjct 29615 ACCAGCCATGAGGCCACGCTTGTTGAGCCAGAAAATAGAGGCGAAGGAGCCGGAGAAGAA 29674
Query 33423 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATG 33479
||| || || || ||||| ||||||| || | || || | | | |||| ||
Sbjct 29675 GATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCAAAGGTAGAATCCTTGTCTTG 29734
Query 33480 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33539
||||||| | ||||| ||||||||||| || | ||||| || || || ||||||||
Sbjct 29735 TATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCAATGGCATT 29794
Query 33540 AAAGAGATA 33548
||||| ||
Sbjct 29795 GAAGAGGTA 29803
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622946553692280
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