Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016
-05-10] 83 sequences; 35,818,201 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq19 91.5 3e-13
seq1 84.2 4e-11
>seq19
Length=888273
Score = 91.5 bits (100), Expect = 3e-13
Identities = 104/137 (76%), Gaps = 2/137 (1%)
Strand=Plus/Plus
Query 280702 CTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA- 280760
||||||| ||||| | ||||| || || |||||| ||||| | ||| ||| ||
Sbjct 215740 CTCACTCCCGCATGCTGGGTCTCTCCGGTGGCCAGCGTGTCAAGGTCGTCCTCGCCGCCT 215799
Query 280761 GCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGC 280820
|||| |||||| | ||||| ||||||| ||||| |||||||||||||| ||||||||
Sbjct 215800 GCTC-GTGGCAGCGTCCTCATTTGATCGTCCTCGATGAGCCTACCAACTACCTGGACCGT 215858
Query 280821 GAGAGCCTGGGCGCTCT 280837
|| ||| || |||||
Sbjct 215859 GACTCCCTTGGTGCTCT 215875
>seq1
Length=2552699
Score = 84.2 bits (92), Expect = 4e-11
Identities = 127/178 (71%), Gaps = 2/178 (1%)
Strand=Plus/Plus
Query 280184 CAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCCACTGA 280243
||| ||||| || ||||| || || || || | ||||||||||||| ||| ||| |
Sbjct 879702 CAACGGTGCCGGAAAGTCCACTCTCATTAAGCTTCTGACTGGCGAGA-CCATCCCAACCA 879760
Query 280244 GGGGTC-CGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCACGCTTTCC 280302
|||| || |||||| |||||| |||| || | |||| || |||||||| ||
Sbjct 879761 CTGGTCGTGTCGAGAAGCACCCCAACTTGCGTATTGGTTACATCAAGCAGCACGCCCTCG 879820
Query 280303 ACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGCTATGC 280360
| ||| | |||| || || || | ||| || ||||| ||| | |||||||| || ||
Sbjct 879821 AGCACGTGGAGATGCATCTCGAGAAGACCCCCAACCAGTACCTCCAGTGGCGTTACGC 879878
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027835706959803
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |