Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016
-05-10] 83 sequences; 35,818,201 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq20 167 4e-36
seq4 120 6e-22
seq3 102 2e-16
seq71 98.7 2e-15
>seq20
Length=799479
Score = 167 bits (184), Expect = 4e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| || | |||||||| || || ||||| || || ||||| || ||||||
Sbjct 288340 CCACCACGAAGACGAAGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAG 288281
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| || ||||| || || | || ||||| || |||
Sbjct 288280 AGGGTGCGGCCGTCCTCAAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGAGGA 288221
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || || || | ||| || ||||||||||| | || || ||
Sbjct 288220 ATGCCCTCCTTGTCCTGGATTTTCGACTTCACATTGTCGATGGTGTCGGACGACTCAACC 288161
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| |||||||| || || ||||||||||||||||| ||||||||
Sbjct 288160 TCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 288114
Score = 161 bits (178), Expect = 2e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || |||||||| | |||||||| |||||| ||| || |||||||| || |||
Sbjct 289024 CCACCACGAAGGCGGAGCACCAAGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 288965
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| ||||||||||| || | |||||| || || || || || | || ||||| |||||
Sbjct 288964 AGCGTCCTCCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGTGGG 288905
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||| || |||||||| | ||||||| || |||||||| | || || ||
Sbjct 288904 ATACCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACC 288845
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | || ||||| ||||| || | |||||||||||| ||||||||
Sbjct 288844 TCGAGAGTAATGGTCTTTCCAGTCAAGGTCTTGACGAAAATCTGCAT 288798
Score = 152 bits (168), Expect = 9e-32
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||| | || | |||||||| ||||| || |||||||| ||||| ||
Sbjct 288796 CCACCACGGAGGCGGAGAACAAGATGTAGCGTCGACTCCTTCTGGATGTTGTAATCAGAC 288737
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || ||||| || || | || ||||| || ||
Sbjct 288736 AGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGG 288677
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||| ||||| ||||| | ||||||| |||||||| || | || || |||
Sbjct 288676 ATACCCTCCTTATCTTGGATCTTAGACTTGACGTTATCGATGGTATCCGACGACTCGACT 288617
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| || || || ||||| ||||| ||||||||||| || |||||
Sbjct 288616 TCCAGCGTAATTGTCTTTCCAGTGAGAGTCTTGACGAAGATTTGCAT 288570
Score = 141 bits (156), Expect = 2e-28
Identities = 153/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| |||||||| || | |||| ||| || || ||||| || |||||||| || ||||||
Sbjct 288112 CCACCGCGAAGACGAAGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 288053
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | ||||| |||||||| || || | ||| ||||| || |||
Sbjct 288052 AGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGA 287993
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||||||||| ||||| ||||||| |||||||| || | || || ||
Sbjct 287992 ATTCCCTCCTTGTCTTGGATCTTGCTCTTGACGTTGTCGATGGTATCGGACGACTCGACC 287933
Query 68415 TCCAAGGTGATGGTTTTTCCCGT 68437
|| | ||||||||| || |||||
Sbjct 287932 TCTAGGGTGATGGTCTTGCCCGT 287910
Score = 125 bits (138), Expect = 1e-23
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| || | |||| || || || ||||| || || ||||| || || ||
Sbjct 288568 CCACCACGAAGACGGAGAACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGAC 288509
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || || || || || | || ||||| || ||
Sbjct 288508 AGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGG 288449
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || || || ||||||||||| | ||||||| || ||||| || | |||||| ||
Sbjct 288448 ATACCCTCTTTATCTTGAATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACC 288389
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | || || || || ||||| || |||||||| || ||||||||
Sbjct 288388 TCAAGCGTAATCGTCTTGCCCGTAAGAGTCTTGACAAAAATCTGCAT 288342
>seq4
Length=1854919
Score = 120 bits (132), Expect = 6e-22
Identities = 134/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| |||||||| || ||||| || || | ||||| || | |||||| || || || ||
Sbjct 704161 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 704102
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
|| | || ||||| || ||||| || ||||||||||| ||||| | |||||| |||
Sbjct 704101 AGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 704042
Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|| || || | || || || || | ||||||||| || ||||| | ||||||||||||
Sbjct 704041 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 703983
>seq3
Length=1861714
Score = 102 bits (112), Expect = 2e-16
Identities = 313/479 (65%), Gaps = 24/479 (5%)
Strand=Plus/Minus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
|||||| || | ||| ||||| || | || || ||| |||||||||| ||| || |
Sbjct 165525 CATGACACCAGTCTTTTGGTAGTCGGCGACACGCTTCTCAAAGAAGTTGGTCTTTCCTGC 165466
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAA--ACTGCTTGGGGTAA 10052
||||| ||| |||||||||||| || ||||| | |||| | | ||| || |
Sbjct 165465 CAGGGAGATGTTCTCCATGAAGTCGAATGGGTTG--GTCGCCTTGTAGTACTTCTCGTTA 165408
Query 10053 CCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAG 10112
||||| | | | | ||| || |||||||| ||||| || |||||| || | |
Sbjct 165407 CCGAGGGAGAGTAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCG 165348
Query 10113 TTCATGCCAATCATGCGG-CAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGAC 10171
|||||||| | || ||| ||||| | || || | ||| || | ||| ||| |||
Sbjct 165347 TTCATGCCGAGCA-GCGCACAGGGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGGAGAC 165289
Query 10172 CGCTTCCTCGACGATGCTCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCT-TCGAAT 10230
|| |||| ||| || | | | || | ||||| | | | | || ||
Sbjct 165288 AGC---CTCGGTAATG------ACGTCTTGGACGGCCTGCTTGCTTGGGCGGTGTCTAAG 165238
Query 10231 --------ACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTC 10282
| ||||| | || | |||||| |||||||| ||| ||||| |||
Sbjct 165237 GTGGGAGAAGAGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTC 165178
Query 10283 GTTGGACAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAA 10342
||| || || ||| |||| |||||| || || || ||||||||||||| | |||
Sbjct 165177 GTTCGAGAAGGTCAGGCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAA 165118
Query 10343 CGACCCGGAGAACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGG 10401
|| |||||||| | | |||||| ||| | |||| |||||||||| |||||||
Sbjct 165117 GGAGCCGGAGAAGAAGATACCCTCAACGGCGGCGAAGGCAACGAGGCGCTGAGCGAAGG 165059
Score = 102 bits (112), Expect = 2e-16
Identities = 313/479 (65%), Gaps = 24/479 (5%)
Strand=Plus/Minus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
|||||| || | ||| ||||| || | || || ||| |||||||||| ||| || |
Sbjct 175381 CATGACACCAGTCTTTTGGTAGTCGGCGACACGCTTCTCAAAGAAGTTGGTCTTTCCTGC 175322
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAA--ACTGCTTGGGGTAA 10052
||||| ||| |||||||||||| || ||||| | |||| | | ||| || |
Sbjct 175321 CAGGGAGATGTTCTCCATGAAGTCGAATGGGTTG--GTCGCCTTGTAGTACTTCTCGTTA 175264
Query 10053 CCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAG 10112
||||| | | | | ||| || |||||||| ||||| || |||||| || | |
Sbjct 175263 CCGAGGGAGAGTAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCG 175204
Query 10113 TTCATGCCAATCATGCGG-CAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGAC 10171
|||||||| | || ||| ||||| | || || | ||| || | ||| ||| |||
Sbjct 175203 TTCATGCCGAGCA-GCGCACAGGGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGGAGAC 175145
Query 10172 CGCTTCCTCGACGATGCTCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCT-TCGAAT 10230
|| |||| ||| || | | | || | ||||| | | | | || ||
Sbjct 175144 AGC---CTCGGTAATG------ACGTCTTGGACGGCCTGCTTGCTTGGGCGGTGTCTAAG 175094
Query 10231 --------ACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTC 10282
| ||||| | || | |||||| |||||||| ||| ||||| |||
Sbjct 175093 GTGGGAGAAGAGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTC 175034
Query 10283 GTTGGACAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAA 10342
||| || || ||| |||| |||||| || || || ||||||||||||| | |||
Sbjct 175033 GTTCGAGAAGGTCAGGCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAA 174974
Query 10343 CGACCCGGAGAACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGG 10401
|| |||||||| | | |||||| ||| | |||| |||||||||| |||||||
Sbjct 174973 GGAGCCGGAGAAGAAGATACCCTCAACGGCGGCGAAGGCAACGAGGCGCTGAGCGAAGG 174915
>seq71
Length=14946
Score = 98.7 bits (108), Expect = 2e-15
Identities = 313/479 (65%), Gaps = 25/479 (5%)
Strand=Plus/Plus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
|||||| || | ||| ||||| || | || || ||| |||||||||| ||| || |
Sbjct 12205 CATGACACCAGTCTTTTGGTAGTCGGCGACACGCTTCTCAAAGAAGTTGGTCTTTCCTGC 12264
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAA--ACTGCTTGGGGTAA 10052
||||| ||| |||||||||||| || ||||| | |||| | | ||| || |
Sbjct 12265 CAGGGAGATGTTCTCCATGAAGTCGAATGGGTTG--GTCGCCTTGTAGTACTTCTCGTTA 12322
Query 10053 CCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAG 10112
||||| | | | | ||| || |||||||| ||||| || |||||| || | |
Sbjct 12323 CCGAGGGAGAGTAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCG 12382
Query 10113 TTCATGCCAATCATGCGG-CAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGAC 10171
|||||||| | || ||| ||||| | || || | ||| || | ||| ||| |||
Sbjct 12383 TTCATGCCGAGCA-GCGCACAGGGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGGAGAC 12441
Query 10172 CGCTTCCTCGACGATGCTCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCT-TCGAAT 10230
|| |||| ||| || | | | || | ||||| | | | | || ||
Sbjct 12442 AGC---CTCGGTAATG------ACGTCTTGGACGGCCTGCTTGCTTGGGCGGTGTCTAAG 12492
Query 10231 --------ACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTC 10282
| ||||| | || | |||||| |||||||| ||| ||||| |||
Sbjct 12493 GTGGGAGAAGAGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTC 12552
Query 10283 GTTGGACAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAA 10342
||| || || ||| |||| |||||| || || || ||||||||||||| | |||
Sbjct 12553 GTTCGAGAAGGTCAGGCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAA 12612
Query 10343 CGACCCGGAGAACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGG 10401
|| |||||||| | | |||||| ||| | |||| |||||||||| |||||||
Sbjct 12613 GGAGCCGGAGAAGAAGATACCCTCAACG-GGGCGAAGGCAACGAGGCGCTGAGCGAAGG 12670
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921621443816760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |