Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016 -05-10] 83 sequences; 35,818,201 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq20 167 4e-36 seq4 120 6e-22 seq3 102 2e-16 seq71 98.7 2e-15 >seq20 Length=799479 Score = 167 bits (184), Expect = 4e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | |||||||| || || ||||| || || ||||| || |||||| Sbjct 288340 CCACCACGAAGACGAAGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAG 288281 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| || ||||| || || | || ||||| || ||| Sbjct 288280 AGGGTGCGGCCGTCCTCAAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGAGGA 288221 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || || || | ||| || ||||||||||| | || || || Sbjct 288220 ATGCCCTCCTTGTCCTGGATTTTCGACTTCACATTGTCGATGGTGTCGGACGACTCAACC 288161 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| |||||||| || || ||||||||||||||||| |||||||| Sbjct 288160 TCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 288114 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || |||||||| | |||||||| |||||| ||| || |||||||| || ||| Sbjct 289024 CCACCACGAAGGCGGAGCACCAAGTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 288965 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || ||||||||||| || | |||||| || || || || || | || ||||| ||||| Sbjct 288964 AGCGTCCTCCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGTGGG 288905 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| || |||||||| | ||||||| || |||||||| | || || || Sbjct 288904 ATACCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACC 288845 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | || ||||| ||||| || | |||||||||||| |||||||| Sbjct 288844 TCGAGAGTAATGGTCTTTCCAGTCAAGGTCTTGACGAAAATCTGCAT 288798 Score = 152 bits (168), Expect = 9e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | |||||||| ||||| || |||||||| ||||| || Sbjct 288796 CCACCACGGAGGCGGAGAACAAGATGTAGCGTCGACTCCTTCTGGATGTTGTAATCAGAC 288737 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || || | || ||||| || || Sbjct 288736 AGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGG 288677 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| ||||| ||||| | ||||||| |||||||| || | || || ||| Sbjct 288676 ATACCCTCCTTATCTTGGATCTTAGACTTGACGTTATCGATGGTATCCGACGACTCGACT 288617 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| || || || ||||| ||||| ||||||||||| || ||||| Sbjct 288616 TCCAGCGTAATTGTCTTTCCAGTGAGAGTCTTGACGAAGATTTGCAT 288570 Score = 141 bits (156), Expect = 2e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || |||||||| || | |||| ||| || || ||||| || |||||||| || |||||| Sbjct 288112 CCACCGCGAAGACGAAGGACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 288053 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | ||||| |||||||| || || | ||| ||||| || ||| Sbjct 288052 AGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGA 287993 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||| ||||| ||||||| |||||||| || | || || || Sbjct 287992 ATTCCCTCCTTGTCTTGGATCTTGCTCTTGACGTTGTCGATGGTATCGGACGACTCGACC 287933 Query 68415 TCCAAGGTGATGGTTTTTCCCGT 68437 || | ||||||||| || ||||| Sbjct 287932 TCTAGGGTGATGGTCTTGCCCGT 287910 Score = 125 bits (138), Expect = 1e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | |||| || || || ||||| || || ||||| || || || Sbjct 288568 CCACCACGAAGACGGAGAACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGAC 288509 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || || || | || ||||| || || Sbjct 288508 AGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGG 288449 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || || || ||||||||||| | ||||||| || ||||| || | |||||| || Sbjct 288448 ATACCCTCTTTATCTTGAATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACC 288389 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | || || || || ||||| || |||||||| || |||||||| Sbjct 288388 TCAAGCGTAATCGTCTTGCCCGTAAGAGTCTTGACAAAAATCTGCAT 288342 >seq4 Length=1854919 Score = 120 bits (132), Expect = 6e-22 Identities = 134/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||||| || || | ||||| || | |||||| || || || || Sbjct 704161 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 704102 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || ||||| || ||||| || ||||||||||| ||||| | |||||| ||| Sbjct 704101 AGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 704042 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 || || || | || || || || | ||||||||| || ||||| | |||||||||||| Sbjct 704041 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 703983 >seq3 Length=1861714 Score = 102 bits (112), Expect = 2e-16 Identities = 313/479 (65%), Gaps = 24/479 (5%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || | ||| ||||| || | || || ||| |||||||||| ||| || | Sbjct 165525 CATGACACCAGTCTTTTGGTAGTCGGCGACACGCTTCTCAAAGAAGTTGGTCTTTCCTGC 165466 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAA--ACTGCTTGGGGTAA 10052 ||||| ||| |||||||||||| || ||||| | |||| | | ||| || | Sbjct 165465 CAGGGAGATGTTCTCCATGAAGTCGAATGGGTTG--GTCGCCTTGTAGTACTTCTCGTTA 165408 Query 10053 CCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAG 10112 ||||| | | | | ||| || |||||||| ||||| || |||||| || | | Sbjct 165407 CCGAGGGAGAGTAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCG 165348 Query 10113 TTCATGCCAATCATGCGG-CAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGAC 10171 |||||||| | || ||| ||||| | || || | ||| || | ||| ||| ||| Sbjct 165347 TTCATGCCGAGCA-GCGCACAGGGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGGAGAC 165289 Query 10172 CGCTTCCTCGACGATGCTCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCT-TCGAAT 10230 || |||| ||| || | | | || | ||||| | | | | || || Sbjct 165288 AGC---CTCGGTAATG------ACGTCTTGGACGGCCTGCTTGCTTGGGCGGTGTCTAAG 165238 Query 10231 --------ACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTC 10282 | ||||| | || | |||||| |||||||| ||| ||||| ||| Sbjct 165237 GTGGGAGAAGAGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTC 165178 Query 10283 GTTGGACAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAA 10342 ||| || || ||| |||| |||||| || || || ||||||||||||| | ||| Sbjct 165177 GTTCGAGAAGGTCAGGCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAA 165118 Query 10343 CGACCCGGAGAACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGG 10401 || |||||||| | | |||||| ||| | |||| |||||||||| ||||||| Sbjct 165117 GGAGCCGGAGAAGAAGATACCCTCAACGGCGGCGAAGGCAACGAGGCGCTGAGCGAAGG 165059 Score = 102 bits (112), Expect = 2e-16 Identities = 313/479 (65%), Gaps = 24/479 (5%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || | ||| ||||| || | || || ||| |||||||||| ||| || | Sbjct 175381 CATGACACCAGTCTTTTGGTAGTCGGCGACACGCTTCTCAAAGAAGTTGGTCTTTCCTGC 175322 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAA--ACTGCTTGGGGTAA 10052 ||||| ||| |||||||||||| || ||||| | |||| | | ||| || | Sbjct 175321 CAGGGAGATGTTCTCCATGAAGTCGAATGGGTTG--GTCGCCTTGTAGTACTTCTCGTTA 175264 Query 10053 CCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAG 10112 ||||| | | | | ||| || |||||||| ||||| || |||||| || | | Sbjct 175263 CCGAGGGAGAGTAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCG 175204 Query 10113 TTCATGCCAATCATGCGG-CAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGAC 10171 |||||||| | || ||| ||||| | || || | ||| || | ||| ||| ||| Sbjct 175203 TTCATGCCGAGCA-GCGCACAGGGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGGAGAC 175145 Query 10172 CGCTTCCTCGACGATGCTCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCT-TCGAAT 10230 || |||| ||| || | | | || | ||||| | | | | || || Sbjct 175144 AGC---CTCGGTAATG------ACGTCTTGGACGGCCTGCTTGCTTGGGCGGTGTCTAAG 175094 Query 10231 --------ACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTC 10282 | ||||| | || | |||||| |||||||| ||| ||||| ||| Sbjct 175093 GTGGGAGAAGAGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTC 175034 Query 10283 GTTGGACAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAA 10342 ||| || || ||| |||| |||||| || || || ||||||||||||| | ||| Sbjct 175033 GTTCGAGAAGGTCAGGCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAA 174974 Query 10343 CGACCCGGAGAACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGG 10401 || |||||||| | | |||||| ||| | |||| |||||||||| ||||||| Sbjct 174973 GGAGCCGGAGAAGAAGATACCCTCAACGGCGGCGAAGGCAACGAGGCGCTGAGCGAAGG 174915 >seq71 Length=14946 Score = 98.7 bits (108), Expect = 2e-15 Identities = 313/479 (65%), Gaps = 25/479 (5%) Strand=Plus/Plus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || | ||| ||||| || | || || ||| |||||||||| ||| || | Sbjct 12205 CATGACACCAGTCTTTTGGTAGTCGGCGACACGCTTCTCAAAGAAGTTGGTCTTTCCTGC 12264 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAA--ACTGCTTGGGGTAA 10052 ||||| ||| |||||||||||| || ||||| | |||| | | ||| || | Sbjct 12265 CAGGGAGATGTTCTCCATGAAGTCGAATGGGTTG--GTCGCCTTGTAGTACTTCTCGTTA 12322 Query 10053 CCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAG 10112 ||||| | | | | ||| || |||||||| ||||| || |||||| || | | Sbjct 12323 CCGAGGGAGAGTAGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCG 12382 Query 10113 TTCATGCCAATCATGCGG-CAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGAC 10171 |||||||| | || ||| ||||| | || || | ||| || | ||| ||| ||| Sbjct 12383 TTCATGCCGAGCA-GCGCACAGGGAAGTGCCTCAGTCAAGAACTCTTGCTCGATGGAGAC 12441 Query 10172 CGCTTCCTCGACGATGCTCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCT-TCGAAT 10230 || |||| ||| || | | | || | ||||| | | | | || || Sbjct 12442 AGC---CTCGGTAATG------ACGTCTTGGACGGCCTGCTTGCTTGGGCGGTGTCTAAG 12492 Query 10231 --------ACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTC 10282 | ||||| | || | |||||| |||||||| ||| ||||| ||| Sbjct 12493 GTGGGAGAAGAGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTC 12552 Query 10283 GTTGGACAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAA 10342 ||| || || ||| |||| |||||| || || || ||||||||||||| | ||| Sbjct 12553 GTTCGAGAAGGTCAGGCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAA 12612 Query 10343 CGACCCGGAGAACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGG 10401 || |||||||| | | |||||| ||| | |||| |||||||||| ||||||| Sbjct 12613 GGAGCCGGAGAAGAAGATACCCTCAACG-GGGCGAAGGCAACGAGGCGCTGAGCGAAGG 12670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621443816760