Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016 -05-10] 83 sequences; 35,818,201 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq5 93.3 4e-14 >seq5 Length=1716043 Score = 93.3 bits (102), Expect = 4e-14 Identities = 161/233 (69%), Gaps = 1/233 (0%) Strand=Plus/Minus Query 20353 AGCT-ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCG 20411 |||| ||||| || || |||| ||||| ||||| |||||||| | | || |||| Sbjct 773970 AGCTGACATAGAACTGCGCAAACATATGACACGGCGGCAGCGCCATGATCTTCAGATCCG 773911 Query 20412 CCGGGTTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCA 20471 | |||||||| |||| || || || | | ||| | ||| ||| | | | Sbjct 773910 CTGGGTTCCATGCACTCAGGATAATACGACGATCATACGGCGTATGGCGCAGCTTGTGAA 773851 Query 20472 CAATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACG 20531 | | | ||| || || | ||||| || || ||||| | | |||||||||||| Sbjct 773850 TTACCTCTGCCAACTGATCCACGCCCTGCCCCGTGTAGTCCGTCTGAGCGTCCACGTACT 773791 Query 20532 CCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCC 20584 ||||||||||||| ||||||||| ||||||||||| |||| || |||||| Sbjct 773790 TGGCCCCAAAGTGCCGCCACTGGAATCCGTAAACAGGGCCCAGGTCACCCTCC 773738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441372342075720