Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016 -05-10] 83 sequences; 35,818,201 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 5e-11 >seq1 Length=2552699 Score = 84.2 bits (92), Expect = 5e-11 Identities = 198/299 (66%), Gaps = 0/299 (0%) Strand=Plus/Minus Query 333693 AGGGCGTAGTAACTCGCTGATTCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTG 333752 |||| |||||| ||| | ||||| || ||| ||||| || | || || |||||| Sbjct 879518 AGGGTGTAGTAGCTCTTAGCCTCGGGCTTCTGCTTGACGAATTCAGCCAAGTTACCCTTG 879459 Query 333753 TACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGG 333812 || ||||| ||| ||||| ||| ||| ||||| || | |||||| Sbjct 879458 TAGCATGCAAGCTTCTTTCCAGGCTCGTAGTGGTAGATATCCGTGCAGACTTCATCGAGG 879399 Query 333813 AACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCA 333872 || ||||||||||| || || |||| | | | | || | | | ||||||| || Sbjct 879398 AAGCCGGAGTCGTGAGAAACGATCAGGGAAGTGATCTCGGTGTGAGTTTTCAGGTAATCC 879339 Query 333873 ATCAGCCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGTAGTAGC 333932 |||||| | ||||| | ||| | || ||||| || ||||| ||||| || | Sbjct 879338 TGGAGCCACTTGACGTTGGCAACATCCAAGTGATTGGTAGGTTCGTCCAGAAGGAGAACA 879279 Query 333933 TTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTTCCACCCTCCTGAAAG 333991 | || |||| | ||| || | ||||||||||| ||||| ||||| || || || || Sbjct 879278 TCGGCCTTCATCAACATAGCTCTGGCAAGAGCGAGCTTCATCTTCCATCCACCGGATAG 879220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102878827156050