Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016
-05-10] 83 sequences; 35,818,201 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq20 120 3e-22
seq28 102 8e-17
seq15 91.5 1e-13
>seq20
Length=799479
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | ||| | ||| | ||| | | | |||||||| |||||||||||||| |
Sbjct 288568 CCACCACGAAGACGGAGAACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGAC 288509
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || ||||| || || ||||| | | |||| || ||||| |||||||||||
Sbjct 288508 AGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGG 288449
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
||||| ||||| || ||| | || | || | | || | ||| |||| || |||||
Sbjct 288448 ATACCCTCTTTATC-TTGAATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCAC 288390
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||| | ||| | ||| || || || ||||| || ||||||||||||||
Sbjct 288389 CTCAAGCGTAATCGTCTTGCCCGTAAGAGTCTTGACAAAAATCTGCAT 288342
Score = 105 bits (116), Expect = 7e-18
Identities = 142/195 (73%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| ||||||||||||||| | || || |||||| || || ||||| |
Sbjct 288307 GACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGCTGCTTACCAGCG 288248
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539
| || || ||||| ||||||||||| || || || ||||| |||||| || | |
Sbjct 288247 AAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATTTTCGACTTCACA 288188
Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599
||| || | |||||||| |||||| ||||| | || | || || ||||| || || ||
Sbjct 288187 TTG-TCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTT 288129
Query 138600 TACAAAAATCTGCAT 138614
|| || ||||||||
Sbjct 288128 GACGAAGATCTGCAT 288114
Score = 105 bits (116), Expect = 7e-18
Identities = 142/194 (73%), Gaps = 4/194 (2%)
Strand=Plus/Minus
Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482
|||||| || |||||||||||||||| || | | ||||| || || ||||| | | |
Sbjct 288989 CTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTCCAGCTGCTTACCAGCAAA 288930
Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--T 138540
||| || ||||| |||||||| || ||||| || || || ||| | || | || | |
Sbjct 288929 GATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATC-CTGAATCTTGGACTTGACGT 288871
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
|| || | |||||| | ||||| ||||||| || | || || ||||||| || ||
Sbjct 288870 TG-TCAATGGTGTCCGAAGACTCAACCTCGAGAGTAATGGTCTTTCCAGTCAAGGTCTTG 288812
Query 138601 ACAAAAATCTGCAT 138614
|| |||||||||||
Sbjct 288811 ACGAAAATCTGCAT 288798
>seq28
Length=369090
Score = 102 bits (112), Expect = 8e-17
Identities = 667/1056 (63%), Gaps = 35/1056 (3%)
Strand=Plus/Plus
Query 153408 AAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGGGTCGATGCTTCTCGTTGCTGCGC 153467
|| || || || |||||||||| ||| ||| | | || | || ||||||||||
Sbjct 126540 AATGCATCAGCAAGACCCTGGACACCAACGGCAACTGGCCTGTGACGGAAGTTGCTGCGC 126599
Query 153468 CTCGCGCTCGCTATGGGATAGTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACC 153527
|| || | | | ||| |||| ||| || || || ||||| | ||| || ||
Sbjct 126600 CTGGCCTCCTCGACGGGGTAGTAGTTGACGTCAATGATCTTGTTCAAGTTCTTAACAACA 126659
Query 153528 ACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATAGGTCATTTCGTCGACG----CGTAC 153583
|| | || | | | | ||| |||| ||| ||||| || | | | | | |||||
Sbjct 126660 ACCTGTGTGACCTCATGAAGCTTCTGGAAGTCATATGTGCCGTTGGCCATGTCAACGTAC 126719
Query 153584 GCATCGATTCACGGCAATAGACGCCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTA 153643
| ||| || ||||| ||| |||| ||||| |||||| ||| || | | | |||
Sbjct 126720 G--TCGG--CAGGGCAAGAGATGCCAAGTTACACACGGCCACCTCATCCGGGGCAGAGTA 126775
Query 153644 CTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCT 153703
|| |||||||| | ||| |||||| || ||| || | || | ||| |||||
Sbjct 126776 CTCGACGATCTCTGTGCACAGGTTGGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCT 126835
Query 153704 TTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTC 153763
||||| ||||| || || || | | |||| | || || ||||| || | ||
Sbjct 126836 CTTGCGGTTGCAAGCATCCTTATACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTC 126895
Query 153764 GACGATAAA---CCTATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGCT 153820
|| ||| | || | || | ||| || | || ||| ||||| |
Sbjct 126896 GAGGATGGAGTACCAAAGC---TTCTGGGCCTTGATGGTCTTGCGACCCTTACCCTCCTT 126952
Query 153821 CTCGTATCGCTCGTACAGTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACA 153880
|||||| | |||||| || ||||||||| ||||||||| ||| || | || || ||
Sbjct 126953 CTCGTAGCCCTCGTAGAGCGCCTCAAACTCATCGCCGTAGACGTCCGCCAATCCAGGGCA 127012
Query 153881 CTGATGCGGACACATCAGCGACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATC 153940
| | || ||||| || | ||| ||| | || || |||||| |||||
Sbjct 127013 TTCGTTGGGGCACATGAGAGTCCAGGCGCCGTTCTTCTCAACACGCTTCATGAAGAGATC 127072
Query 153941 CGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAATCCTCCGCGCCCATGTTGCG 154000
||| | |||||| ||||| | ||||| || || | |||||| ||| |||
Sbjct 127073 CGGGATCCAGAGAGCGTAGAATAGGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTT 127132
Query 154001 TTTCAGATTGAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGC 154060
| ||| | || | | ||| || || ||||| || |||| ||||| ||| | ||
Sbjct 127133 TCTCAAGTCCAGGAACTCAAAGACATCCGCATGCCATGGCTCAACGTAGATGGCGAAAGC 127192
Query 154061 ACCTTTACGCTTT---CCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCAC 154117
||| ||||| || ||||| || |||| | | | | |||||||||||||| |
Sbjct 127193 ACCGGGTCGCTTGTTACCACCCTGGTCAACGTACCTCGCGGTGTTGTTGAAGACGCGGAG 127252
Query 154118 CATGGGTTCCAGGCCGCTTGCGGTGCCGTTGGT--CG--AATTGATCTTGCTGCCGCGGG 154173
|||||| | | ||| | | | | || ||||| || ||| | ||| || ||
Sbjct 127253 CATGGGAACGATACCGTTCGAGTTTCCATTGGTACCGGCAATGTA---TGC-ACCAGTGG 127308
Query 154174 CGCGCACTTGATGCACGTTAACGCCAATGCCGCC-GCCGTACTTTGATATGGCAGCGCA- 154231
| || | |||| | ||| | || || || || || || |||||| || || ||
Sbjct 127309 CACGGATACGATGGATGTTTAATCCGATACCTCCAGCAGT-CTTTGAGATCATGGCACAT 127367
Query 154232 GTCGCCCAGCGTCCTGTAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACA 154291
||| ||||| ||||| || || || ||||| || | | ||| |||||| ||
Sbjct 127368 GTC-TTGAGCGTGTCATAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCA 127426
Query 154292 CGAACACATTTGCGGAATG-CGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAA 154350
|| ||| || || || | || || || ||||| || || ||||| || |
Sbjct 127427 GGATGACAGCTG-GGCCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGA 127485
Query 154351 ACAGTTTTTGG--CTCATCATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTG 154408
||| ||||| ||| | | ||| || ||| | | | || ||||| ||||||||
Sbjct 127486 --AGTATTTGGAAGACATGAGGTTGTATGTCTCGGTTGTCTTCTCAATATCCTCGCCGTG 127543
Query 154409 AATGCCGAGCGCGACGCGCATGAGCATGTGCTGCGG 154444
|||||| | ||| || ||||| | ||||||||| ||
Sbjct 127544 AATGCCCACCGCAACACGCATAATCATGTGCTGTGG 127579
>seq15
Length=1123021
Score = 91.5 bits (100), Expect = 1e-13
Identities = 141/199 (71%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || ||||||||||| | || || ||||||||| || || || |
Sbjct 653278 GACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCG 653219
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539
|||| || ||||| |||||||| || || || || ||||| ||| || || | |
Sbjct 653218 AAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACA 653159
Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599
||| || | ||||||| |||||||||||| | || | || || || ||||| || ||
Sbjct 653158 TTG-TCGATAGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTT 653100
Query 138600 TACAAAAATCTGCATGGCT 138618
|| || || |||||| ||
Sbjct 653099 CACGAAGATTTGCATGACT 653081
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496261885127760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |