Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016 -05-10] 83 sequences; 35,818,201 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq20 120 3e-22 seq28 102 8e-17 seq15 91.5 1e-13 >seq20 Length=799479 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||| | ||| | | | |||||||| |||||||||||||| | Sbjct 288568 CCACCACGAAGACGGAGAACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGAC 288509 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||| || || ||||| | | |||| || ||||| ||||||||||| Sbjct 288508 AGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGG 288449 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| ||||| || ||| | || | || | | || | ||| |||| || ||||| Sbjct 288448 ATACCCTCTTTATC-TTGAATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCAC 288390 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | ||| | ||| || || || ||||| || |||||||||||||| Sbjct 288389 CTCAAGCGTAATCGTCTTGCCCGTAAGAGTCTTGACAAAAATCTGCAT 288342 Score = 105 bits (116), Expect = 7e-18 Identities = 142/195 (73%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| ||||||||||||||| | || || |||||| || || ||||| | Sbjct 288307 GACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGCTGCTTACCAGCG 288248 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 | || || ||||| ||||||||||| || || || ||||| |||||| || | | Sbjct 288247 AAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATTTTCGACTTCACA 288188 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | |||||||| |||||| ||||| | || | || || ||||| || || || Sbjct 288187 TTG-TCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTT 288129 Query 138600 TACAAAAATCTGCAT 138614 || || |||||||| Sbjct 288128 GACGAAGATCTGCAT 288114 Score = 105 bits (116), Expect = 7e-18 Identities = 142/194 (73%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||||||||||| || | | ||||| || || ||||| | | | Sbjct 288989 CTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTCCAGCTGCTTACCAGCAAA 288930 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--T 138540 ||| || ||||| |||||||| || ||||| || || || ||| | || | || | | Sbjct 288929 GATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATC-CTGAATCTTGGACTTGACGT 288871 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 || || | |||||| | ||||| ||||||| || | || || ||||||| || || Sbjct 288870 TG-TCAATGGTGTCCGAAGACTCAACCTCGAGAGTAATGGTCTTTCCAGTCAAGGTCTTG 288812 Query 138601 ACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 288811 ACGAAAATCTGCAT 288798 >seq28 Length=369090 Score = 102 bits (112), Expect = 8e-17 Identities = 667/1056 (63%), Gaps = 35/1056 (3%) Strand=Plus/Plus Query 153408 AAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGGGTCGATGCTTCTCGTTGCTGCGC 153467 || || || || |||||||||| ||| ||| | | || | || |||||||||| Sbjct 126540 AATGCATCAGCAAGACCCTGGACACCAACGGCAACTGGCCTGTGACGGAAGTTGCTGCGC 126599 Query 153468 CTCGCGCTCGCTATGGGATAGTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACC 153527 || || | | | ||| |||| ||| || || || ||||| | ||| || || Sbjct 126600 CTGGCCTCCTCGACGGGGTAGTAGTTGACGTCAATGATCTTGTTCAAGTTCTTAACAACA 126659 Query 153528 ACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATAGGTCATTTCGTCGACG----CGTAC 153583 || | || | | | | ||| |||| ||| ||||| || | | | | | ||||| Sbjct 126660 ACCTGTGTGACCTCATGAAGCTTCTGGAAGTCATATGTGCCGTTGGCCATGTCAACGTAC 126719 Query 153584 GCATCGATTCACGGCAATAGACGCCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTA 153643 | ||| || ||||| ||| |||| ||||| |||||| ||| || | | | ||| Sbjct 126720 G--TCGG--CAGGGCAAGAGATGCCAAGTTACACACGGCCACCTCATCCGGGGCAGAGTA 126775 Query 153644 CTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCT 153703 || |||||||| | ||| |||||| || ||| || | || | ||| ||||| Sbjct 126776 CTCGACGATCTCTGTGCACAGGTTGGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCT 126835 Query 153704 TTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTC 153763 ||||| ||||| || || || | | |||| | || || ||||| || | || Sbjct 126836 CTTGCGGTTGCAAGCATCCTTATACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTC 126895 Query 153764 GACGATAAA---CCTATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGCT 153820 || ||| | || | || | ||| || | || ||| ||||| | Sbjct 126896 GAGGATGGAGTACCAAAGC---TTCTGGGCCTTGATGGTCTTGCGACCCTTACCCTCCTT 126952 Query 153821 CTCGTATCGCTCGTACAGTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACA 153880 |||||| | |||||| || ||||||||| ||||||||| ||| || | || || || Sbjct 126953 CTCGTAGCCCTCGTAGAGCGCCTCAAACTCATCGCCGTAGACGTCCGCCAATCCAGGGCA 127012 Query 153881 CTGATGCGGACACATCAGCGACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATC 153940 | | || ||||| || | ||| ||| | || || |||||| ||||| Sbjct 127013 TTCGTTGGGGCACATGAGAGTCCAGGCGCCGTTCTTCTCAACACGCTTCATGAAGAGATC 127072 Query 153941 CGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAATCCTCCGCGCCCATGTTGCG 154000 ||| | |||||| ||||| | ||||| || || | |||||| ||| ||| Sbjct 127073 CGGGATCCAGAGAGCGTAGAATAGGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTT 127132 Query 154001 TTTCAGATTGAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGC 154060 | ||| | || | | ||| || || ||||| || |||| ||||| ||| | || Sbjct 127133 TCTCAAGTCCAGGAACTCAAAGACATCCGCATGCCATGGCTCAACGTAGATGGCGAAAGC 127192 Query 154061 ACCTTTACGCTTT---CCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCAC 154117 ||| ||||| || ||||| || |||| | | | | |||||||||||||| | Sbjct 127193 ACCGGGTCGCTTGTTACCACCCTGGTCAACGTACCTCGCGGTGTTGTTGAAGACGCGGAG 127252 Query 154118 CATGGGTTCCAGGCCGCTTGCGGTGCCGTTGGT--CG--AATTGATCTTGCTGCCGCGGG 154173 |||||| | | ||| | | | | || ||||| || ||| | ||| || || Sbjct 127253 CATGGGAACGATACCGTTCGAGTTTCCATTGGTACCGGCAATGTA---TGC-ACCAGTGG 127308 Query 154174 CGCGCACTTGATGCACGTTAACGCCAATGCCGCC-GCCGTACTTTGATATGGCAGCGCA- 154231 | || | |||| | ||| | || || || || || || |||||| || || || Sbjct 127309 CACGGATACGATGGATGTTTAATCCGATACCTCCAGCAGT-CTTTGAGATCATGGCACAT 127367 Query 154232 GTCGCCCAGCGTCCTGTAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACA 154291 ||| ||||| ||||| || || || ||||| || | | ||| |||||| || Sbjct 127368 GTC-TTGAGCGTGTCATAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCA 127426 Query 154292 CGAACACATTTGCGGAATG-CGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAA 154350 || ||| || || || | || || || ||||| || || ||||| || | Sbjct 127427 GGATGACAGCTG-GGCCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGA 127485 Query 154351 ACAGTTTTTGG--CTCATCATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTG 154408 ||| ||||| ||| | | ||| || ||| | | | || ||||| |||||||| Sbjct 127486 --AGTATTTGGAAGACATGAGGTTGTATGTCTCGGTTGTCTTCTCAATATCCTCGCCGTG 127543 Query 154409 AATGCCGAGCGCGACGCGCATGAGCATGTGCTGCGG 154444 |||||| | ||| || ||||| | ||||||||| || Sbjct 127544 AATGCCCACCGCAACACGCATAATCATGTGCTGTGG 127579 >seq15 Length=1123021 Score = 91.5 bits (100), Expect = 1e-13 Identities = 141/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | || || ||||||||| || || || | Sbjct 653278 GACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCG 653219 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| || ||||| |||||||| || || || || ||||| ||| || || | | Sbjct 653218 AAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACA 653159 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | ||||||| |||||||||||| | || | || || || ||||| || || Sbjct 653158 TTG-TCGATAGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTT 653100 Query 138600 TACAAAAATCTGCATGGCT 138618 || || || |||||| || Sbjct 653099 CACGAAGATTTGCATGACT 653081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261885127760