Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016
-05-10] 83 sequences; 35,818,201 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq20 102 7e-17
>seq20
Length=799479
Score = 102 bits (112), Expect = 7e-17
Identities = 150/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191
|| |||||||| || || ||||| || || || || || | ||| ||| |||
Sbjct 288550 ACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCC 288491
Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251
| || || || || | |||| || ||||||||||| || || || ||||||||||||
Sbjct 288490 AGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGGATACCCTCTTTATCTTGA 288431
Query 45252 ATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310
|| || |||| || | || | ||| ||||| || || || || || |||| ||| ||
Sbjct 288430 ATCTTCGACTTGA-CGTTATCAATGGTATCGGATGATTCCACCTCAAGCGTAATCGTCTT 288372
Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||| || ||||| || |||||||| |||||
Sbjct 288371 GCCCGTAAGAGTCTTGACAAAAATCTGCAT 288342
Score = 98.7 bits (108), Expect = 9e-16
Identities = 162/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | || ||||| ||||| || ||||| ||||| || |||||
Sbjct 288799 ATACCACCACGGAGGCGGAGAACAAGATGTAGCGTCGACTCCTTCTGGATGTTGTAATCA 288740
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| ||| || | || || || ||| | |||| || |||||||||||
Sbjct 288739 GACAGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGA 288680
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| || || || |||||||| || || |||| || | || | ||| || || |||||
Sbjct 288679 GGGATACCCTCCTTATCTTGGATCTTAGACTTGA-CGTTATCGATGGTATCCGACGACTC 288621
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|||||| || |||| || || || || ||||| || || || ||||||||
Sbjct 288620 GACTTCCAGCGTAATTGTCTTTCCAGTGAGAGTCTTGACGAAGATTTGCAT 288570
Score = 91.5 bits (100), Expect = 1e-13
Identities = 137/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 45150 TCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTAT 45209
||||| ||||| || || ||||| | || | ||| |||| || || || || |
Sbjct 288988 TCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTCCAGCTGCTTACCAGCAAAG 288929
Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269
|||| || ||||||||||| || || || || ||||| ||||| || |||| || |
Sbjct 288928 ATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGAATCTTGGACTTGA-CGTT 288870
Query 45270 -TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328
|| | |||||| |||||||| || |||||||||| || || || || | || || ||
Sbjct 288869 GTCAATGGTGTCCGAAGACTCAACCTCGAGAGTAATGGTCTTTCCAGTCAAGGTCTTGAC 288810
Query 45329 AAAAATTTGCAT 45340
||||| |||||
Sbjct 288809 GAAAATCTGCAT 288798
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452002731046680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |