Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016 -05-10] 83 sequences; 35,818,201 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq28 273 3e-68 seq3 158 1e-33 seq71 154 2e-32 seq25 120 4e-22 >seq28 Length=369090 Score = 273 bits (302), Expect = 3e-68 Identities = 1069/1658 (64%), Gaps = 57/1658 (3%) Strand=Plus/Plus Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617 |||||||||||||| || |||||||| || |||||||| || | ||||| || | Sbjct 125856 CGGAGGTAGTACATGCCGGTCTTGAGGCCGAGCTTCCAGCCAGCAAAGTGCATGGATGTG 125915 Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677 | |||| | |||||| | |||| || ||| | ||||| |||||||||||| Sbjct 125916 ATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCGATGAAG 125975 Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTT 115734 ||| || || |||||||| | | | | | | || | || ||||| || || Sbjct 125976 GCTCCACGGTCAGCCGCCATCTGGACGA--TGGTGCG-CTGGGAGATCTCCCAGACGGTC 126032 Query 115735 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCC 115794 |||||||| ||| || || | ||||| | |||||| ||||| ||||| || || Sbjct 126033 TTGTAGAGGGCCTTGATGTCGGCGGGGATGTTGGGGATATTCTGGATGGAGCCTCCGTCC 126092 Query 115795 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCT----C 115850 || ||| | | |||||| | | ||||| || || || | || |||| | Sbjct 126093 GCGATGATGCGGTTCTTCATGTTGTCAGACCACAGTCCCATGTCGACCAGGTCCTTGAGC 126152 Query 115851 CACGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTT 115910 || ||| | || || || ||||| || || ||| || | | |||||||| Sbjct 126153 AACCAGGGG----TTAACGACTTGGAACTCGCCGGCCAGGACACGGCGCGAGTAGATGTT 126208 Query 115911 GGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGG 115970 || |||||||||||||||||||| ||| || | || |||| ||||| || ||||| Sbjct 126209 GGAGGTGTATGGCTCAAAGCACTCGTTGAAGCCGAGAATCTGGGAGGTGGAAGCAGTGGG 126268 Query 115971 CATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGC 116030 ||||||||| | ||| || |||||||| ||| | | | || || ||||||| | Sbjct 126269 CATGGGTGCAACGAGCAGAGAGTTGCGGACACCGTGCTGCTTGATCCGAACCTTGAGAGA 126328 Query 116031 GTCCCAGTCGTAGTTGA-GCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTT 116089 ||||||||| | | | | | | | | |||||||||| | ||||| || | Sbjct 126329 GTCCCAGTCCCACAGGTCGGTAGGAGTAACGC-CCCACATATCGTATTGGAGCTCGCCCT 126387 Query 116090 GGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTC---GG 116146 |||| ||||||||||||| | ||||| || | ||| | || || |||| || || Sbjct 126388 TGGACACTGGCGATCCCTCGTACGTCTCGTACGTGCCGTGAATCTGGGCCAGCTCCACGG 126447 Query 116147 AGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGG 116206 || | | | || |||| || || |||||||| || | | || | ||||| Sbjct 126448 AGGCAGTC---AAAGCACCGTGGTAGATGGTCTCAAAGATCTGGGAGTTGAGGAACTTGG 126504 Query 116207 CCTCGTCGGAATCAAACGCGAGACGGCACAAA---ATAAATACATCCGCGAGACCTTGGA 116263 ||||| ||||| || | || ||| | | | ||| |||| || ||||| |||| Sbjct 126505 CCTCGGGAGAATCGAAGG---GAAGGCGAAGAGCCAGGAATGCATCAGCAAGACCCTGGA 126561 Query 116264 CACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGGGAT 116320 |||| | | ||| ||| | || | | || | || || |||| ||||| | Sbjct 126562 CACCAACGGCAACTGGCCTGTGACGGAAGTTGC---TGCGCCTGGCCTCCTCGACGGGGT 126618 Query 116321 AAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAA 116380 | | || || || | | | || | || || ||||||| ||||| ||||||| Sbjct 126619 AGTAGTTGACGTCAATGATCTTGTTCAAGTTCTTAACAACAACCTGTGTGACCTCATGAA 126678 Query 116381 GCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACG 116440 |||| | | | ||| | ||| | | | || ||| | || ||||| | || | Sbjct 126679 GCTTCTGGAAGTCATATGTGCCGTTGGCCATGTCAACGTACGTCGGCAGGGCAAGAGATG 126738 Query 116441 CCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAAT 116500 ||| |||||||| | ||||||| ||| |||||| | || || || |||| | Sbjct 126739 CCAAGTTACACACGGCCACCTCATCCGGGGCAGAGTACTCGACGATCTCTGTGCACAGGT 126798 Query 116501 TTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGT 116560 | || || ||||| || | |||||| || || ||| ||| || |||||||| | Sbjct 126799 TGGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTAT 126858 Query 116561 AGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCG 116619 | | ||| | || | || ||||| || || |||| ||| || | | ||| | | || Sbjct 126859 ACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGGATGGAGTACCAAAGCTTCT 126918 Query 116620 GCGGCTGGCACAGTGGCGTTGGCTCGC---CCCTCCTCCTCGTACTTTGTGTAGAGGGCC 116676 | | || | ||| ||| | | ||||||| |||||| |||||| ||| Sbjct 126919 GGGCCTTGA----TGGTCTTGCGACCCTTACCCTCCTTCTCGTAGCCCTCGTAGAGCGCC 126974 Query 116677 TCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGA-CAGAAGAGAGA 116735 |||||||| || || | || | | || || || || ||| || | ||||| Sbjct 126975 TCAAACTCATCGCCGTAGACGTCCGCCAATCCAGG-GCATTCGTTGGGGCACATGAGAGT 127033 Query 116736 CCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAA 116795 ||| || || |||||| |||||||||||||| || ||||||||||| || |||| Sbjct 127034 CCAGGCGCCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAA 127093 Query 116796 GAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCAT 116855 || || || || |||| || | || || || | ||| |||| || || | Sbjct 127094 TAGGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCAAGTCCAGGAACTCAAA 127153 Query 116856 GATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----CCCTTGCGACGACC 116909 || |||||| ||||| || || | ||| | |||| | || | |||| ||| Sbjct 127154 GACATCCGCATGCCATGGCTCAACGTAGATGGCGAAAGCACCGGGTCGCTTG---TTACC 127210 Query 116910 AGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATC 116969 | |||||| || |||||||| || ||| || ||||| ||||| |||| |||||| | Sbjct 127211 ACCCTGGTCAACGTACCTCGCGGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCGTT 127270 Query 116970 AGATTGGCCATTTGTCCCCCGAATACGAG-ACTTGTTGGCTCTGACATCGTGGATGTGCA 117028 || | ||||| || || ||| | || | |||| | || | ||||||| | Sbjct 127271 CGAGTTTCCATTGGTACCGGCAATGTATGCACCAG-TGGCACGGATACGATGGATGTTTA 127329 Query 117029 TACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCC 117088 || ||||| || || ||||||||| || || | |||| || | ||||| | Sbjct 127330 ATCCGATACCTCCAGCAGTCTTTGAGATCATGGCACATGTCTTGAGCGTGTCATAGATAC 127389 Query 117089 CATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCT-TGGT 117147 | || || || |||| | ||| | ||||||| |||| || ||||| |||| Sbjct 127390 CCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTG-GGCCTGTGGT 127448 Query 117148 GTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA 117185 |||||||| |||||||| ||||| | ||||| |||| Sbjct 127449 GTACCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAA 127486 >seq3 Length=1861714 Score = 158 bits (174), Expect = 1e-33 Identities = 346/510 (68%), Gaps = 9/510 (2%) Strand=Plus/Minus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 ||||||||||||||||||||||||||| || ||||||||| ||| || | |||||| || Sbjct 165207 GTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGGTCAGGCCGGCCATGAGGCC 165148 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 |||||||| | ||||||||| | || ||||| ||||||||||| ||||| || Sbjct 165147 ACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCAACGGC 165088 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCATCG 127709 ||||| |||| || |||| || |||| | | | |||| | | |||| | | | Sbjct 165087 GGCGAAGGCAACGAGGCGCTGAGCGAAGGTG-GAATCCTTGTCTTGGATCCACCTAACTG 165029 Query 127710 CCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCT 127769 |||| | ||||| |||| || || || | ||||| ||| || | ||||| | | Sbjct 165028 CCCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGATGGCATTGAAGAGGTATGTGC 164969 Query 127770 TTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCA 127829 || | | | || |||||||| | || ||||| || ||||| ||| |||| | Sbjct 164968 GTTGAGCTTGTTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGAATGT 164909 Query 127830 TTTC-ATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCG 127888 | || || ||| || || ||||||| |||| ||||| || || ||||| | Sbjct 164908 TCTCTATCATGATTTGGAAAC-CGTAGAAGCAGCGGGCTTCTGGGATTTGGACCTC-GCT 164851 Query 127889 GCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAG 127947 || || | | || |||||| |||||||| || ||| | || || || || || Sbjct 164850 GCTGAAGCGCTCGAGGAGATTCTCGTTGACAATTCCGTCTGACGCGGCGAAGAAAGCGAG 164791 Query 127948 GATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCGAGATC 128004 | | ||||| | | |||| || || | || | |||||||||| || || Sbjct 164790 AACGTGGGAAATGAAGTAACGCTCATCGTCATTGAGGCGGTTGTTCCAGTCGTGAAGGTC 164731 Query 128005 CTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 ||| |||||||| | |||||| || ||||| Sbjct 164730 CTTGGAGAGATCAATCTCCTCTGCCGTCCA 164701 Score = 158 bits (174), Expect = 1e-33 Identities = 346/510 (68%), Gaps = 9/510 (2%) Strand=Plus/Minus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 ||||||||||||||||||||||||||| || ||||||||| ||| || | |||||| || Sbjct 175063 GTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGGTCAGGCCGGCCATGAGGCC 175004 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 |||||||| | ||||||||| | || ||||| ||||||||||| ||||| || Sbjct 175003 ACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCAACGGC 174944 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCATCG 127709 ||||| |||| || |||| || |||| | | | |||| | | |||| | | | Sbjct 174943 GGCGAAGGCAACGAGGCGCTGAGCGAAGGTG-GAATCCTTGTCTTGGATCCACCTAACTG 174885 Query 127710 CCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCT 127769 |||| | ||||| |||| || || || | ||||| ||| || | ||||| | | Sbjct 174884 CCCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGATGGCATTGAAGAGGTATGTGC 174825 Query 127770 TTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCA 127829 || | | | || |||||||| | || ||||| || ||||| ||| |||| | Sbjct 174824 GTTGAGCTTGTTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGAATGT 174765 Query 127830 TTTC-ATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCG 127888 | || || ||| || || ||||||| |||| ||||| || || ||||| | Sbjct 174764 TCTCTATCATGATTTGGAAAC-CGTAGAAGCAGCGGGCTTCTGGGATTTGGACCTC-GCT 174707 Query 127889 GCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAG 127947 || || | | || |||||| |||||||| || ||| | || || || || || Sbjct 174706 GCTGAAGCGCTCGAGGAGATTCTCGTTGACAATTCCGTCTGACGCGGCGAAGAAAGCGAG 174647 Query 127948 GATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCGAGATC 128004 | | ||||| | | |||| || || | || | |||||||||| || || Sbjct 174646 AACGTGGGAAATGAAGTAACGCTCATCGTCATTGAGGCGGTTGTTCCAGTCGTGAAGGTC 174587 Query 128005 CTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 ||| |||||||| | |||||| || ||||| Sbjct 174586 CTTGGAGAGATCAATCTCCTCTGCCGTCCA 174557 >seq71 Length=14946 Score = 154 bits (170), Expect = 2e-32 Identities = 346/510 (68%), Gaps = 10/510 (2%) Strand=Plus/Plus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 ||||||||||||||||||||||||||| || ||||||||| ||| || | |||||| || Sbjct 12523 GTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGGTCAGGCCGGCCATGAGGCC 12582 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 |||||||| | ||||||||| | || ||||| ||||||||||| ||||| || Sbjct 12583 ACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCAAC-GG 12641 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCATCG 127709 ||||| |||| || |||| || |||| | | | |||| | | |||| | | | Sbjct 12642 GGCGAAGGCAACGAGGCGCTGAGCGAAGGTG-GAATCCTTGTCTTGGATCCACCTAACTG 12700 Query 127710 CCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCT 127769 |||| | ||||| |||| || || || | ||||| ||| || | ||||| | | Sbjct 12701 CCCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGATGGCATTGAAGAGGTATGTGC 12760 Query 127770 TTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCA 127829 || | | | || |||||||| | || ||||| || ||||| ||| |||| | Sbjct 12761 GTTGAGCTTGTTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGAATGT 12820 Query 127830 TTTC-ATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCG 127888 | || || ||| || || ||||||| |||| ||||| || || ||||| | Sbjct 12821 TCTCTATCATGATTTGGAAAC-CGTAGAAGCAGCGGGCTTCTGGGATTTGGACCTC-GCT 12878 Query 127889 GCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAG 127947 || || | | || |||||| |||||||| || ||| | || || || || || Sbjct 12879 GCTGAAGCGCTCGAGGAGATTCTCGTTGACAATTCCGTCTGACGCGGCGAAGAAAGCGAG 12938 Query 127948 GATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCGAGATC 128004 | | ||||| | | |||| || || | || | |||||||||| || || Sbjct 12939 AACGTGGGAAATGAAGTAACGCTCATCGTCATTGAGGCGGTTGTTCCAGTCGTGAAGGTC 12998 Query 128005 CTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 ||| |||||||| | |||||| || ||||| Sbjct 12999 CTTGGAGAGATCAATCTCCTCTGCCGTCCA 13028 >seq25 Length=557695 Score = 120 bits (132), Expect = 4e-22 Identities = 170/236 (72%), Gaps = 10/236 (4%) Strand=Plus/Plus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 |||||| ||||||| | |||| ||||| || ||||||||| |||||| | |||||| || Sbjct 29570 GTGGAGGCCCTCGTTATGGGATATGAGCTCGTTCGAGAAGGTCAGACCAGCCATGAGGCC 29629 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 ||||| || | ||||||||| | || ||||| ||||||||||| ||||| || Sbjct 29630 ACGCTTGTTGAGCCAGAAAATAGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCAACGGC 29689 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGG-AG----CGGGACTTTGTATCAAACCACTTC 127705 ||||| |||| ||||||| ||||||| || | | | |||||| |||| | Sbjct 29690 AGCGAAGGCAACGAGACGCTGAGCAAAGGTAGAATCCTTGTC-TTGTAT----CCACCTA 29744 Query 127706 ATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAG 127761 | ||||| | ||||| |||| ||| || || | ||||| || || | ||||| Sbjct 29745 ACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCAATGGCATTGAAGAG 29800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506563486280