Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016
-05-10] 83 sequences; 35,818,201 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq28 136 6e-27
>seq28
Length=369090
Score = 136 bits (150), Expect = 6e-27
Identities = 421/637 (66%), Gaps = 16/637 (3%)
Strand=Plus/Plus
Query 203885 AGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGT 203944
|| ||||||||||||||||| ||||| || ||| || | ||||||||| | |
Sbjct 125859 AGGTAGTACATGCCGGTCTTGAGGCCGAGCTTCCAGCCAGCAAAGTGCATGGATGTGATC 125918
Query 203945 TTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGC 204004
|||| || | ||||| |||||| ||||| || |||||| || |||||| |||||
Sbjct 125919 TTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCGATG-AAGGC 125977
Query 204005 GCC-CGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAA 204063
|| || || || ||||| | || ||||| ||| || |||||||| || |||||| |
Sbjct 125978 TCCACGGTCAGCCGCCATCTGGACGATGGTGCGCTGGGAGATCTCCCAGACGGTCTTGTA 126037
Query 204064 CACGTCTCTGGTGT-GTTGAGGCACATCTT-CCCACGTCCT-GATCGAGCCGTTGTCGGC 204120
| | | || ||| | | || || || | | || ||| ||||| ||| ||
Sbjct 126038 GAGGGCCTTGATGTCGGCGGGG---ATGTTGGGGATATTCTGGATGGAGCCTCCGTCCGC 126094
Query 204121 CATCAGTCTCATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAG 204180
|| | | || || | | || ||||| |||| || ||| ||| | ||
Sbjct 126095 GATGATGCGGTTCTTCATGTTGTCAGACCACAGTCCCATGTCGACCAGGTCCTTGAGCAA 126154
Query 204181 GTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGT 204240
|||||| | || || || || |||| ||| || | || | | | | |||| |||
Sbjct 126155 CCAGGGGTTAACGACTTGGAACTCGCCGGCCAGGACACGGCGCGAGTAGATGTTGGAGGT 126214
Query 204241 GAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGG 204300
| |||| || || ||||||| ||||| |||||| | |||| || |||||||||||
Sbjct 126215 GTATGGCTCAAAGCACTCGTTGAAGCCGAGAATCTGGGAGGTGGAAGCAGTGGGCATGGG 126274
Query 204301 AGCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCA 204360
|| | |||||| |||||||| ||||||| | | || || ||| |||||| |||
Sbjct 126275 TGCAACGAGCAGAGAGTTGCGGACACCGTGCTGCTTGATCCGAACCTTGAGAGAGTCCCA 126334
Query 204361 GTCGTGCATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCC--TTGACTG 204418
||| || | | || | ||||||||||| ||| | || | ||| | |||
Sbjct 126335 GTCCCACAGGTCGGTAGGAGTAACGCCCCACATATCGTATTGGAGCTCGCCCTTGGAC-- 126392
Query 204419 ACTGGGCTGCCCTTGTACGTCGGATAAG-GCTGATCCTCTTCTGCCAGCTTGCAC-GAGG 204476
||||| |||| ||||||| || | || | || | |||||| | ||| ||||
Sbjct 126393 ACTGGCGATCCCTCGTACGTCTCGTACGTGCCGTGAATC-TGGGCCAGC-TCCACGGAGG 126450
Query 204477 CGGCCATGGCGTGATAGTACATGGTCTCAAAGATCTG 204513
| | || || | ||| |||||||||||||||||
Sbjct 126451 CAGTCAAAGCACCGTGGTAGATGGTCTCAAAGATCTG 126487
Score = 100 bits (110), Expect = 5e-16
Identities = 304/460 (66%), Gaps = 26/460 (6%)
Strand=Plus/Plus
Query 204931 CTGCTGGTTAGACTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTC 204990
|| |||||| ||||||||| || | ||||| |||| |||||| || |||| ||||
Sbjct 126824 CTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTATACAACATGAAAGGGTTTCCTGTCTC 126883
Query 204991 CATCTGAGA-TCGCAGAATGTGGGTCCACAATTCGCGAGCCTCCA----CTTGCTTCACG 205045
||||||| ||| || ||| | ||| | | | |||| | ||||| | |
Sbjct 126884 AGTCTGAGACTCG-AGGATGGAGTACCAAAGCTTCTGGGCCTTGATGGTCTTGCGACCCT 126942
Query 205046 TACATCCCTTGAGACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCC 205105
||| |||| |||||| ||| |||||| |||| ||| ||||| ||||||
Sbjct 126943 TACCCTCCTT----CTCGTAGCCCTCGTAGAGCGCCTCAAACTCATCGCCGTAGACGTCC 126998
Query 205106 ATCAGCCCTGGACATTTTTTGGGACACATCAGAGACCACAT-CTGATCGTCTTTCACCCT 205164
|| || || |||| ||||| ||||| |||| ||| | | || ||| || |
Sbjct 126999 GCCAATCCAGGGCATTCGTTGGGGCACATGAGAGTCCAGGCGCCGTTCTTCTCA-ACACG 127057
Query 205165 CTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTC 205224
|| ||| || || || |||||| || |||| || || |||||||| | | | | ||
Sbjct 127058 CTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAATAGGTCACGGGCACGGACTTCCTC 127117
Query 205225 GTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCAATG---TCGGCGTGCCACGGCTC 205281
| || |||||||| |||||||||| | | ||| | || || ||||| |||||
Sbjct 127118 CTTGCCGTGGTTCTTTCTCAAGTCCAGGAA---CTCAAAGACATCCGCATGCCATGGCTC 127174
Query 205282 TAACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTC----CACCATGCGAG 205337
| | | ||| | || || || | |||||| ||||||||||| ||| ||| |
Sbjct 127175 AACGTAGATGGCGAAAGCACCGGGTCGCTTGTTACCACCCTGGTCAACGTACCTCGCG-G 127233
Query 205338 TCATCGCGTTGAAAACTCGCAGCATCGGCACCAGACCGTT 205377
| | |||||| || || ||||| || || | ||||||
Sbjct 127234 TGTT---GTTGAAGACGCGGAGCATGGGAACGATACCGTT 127270
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795154375026480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |