Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016 -05-10] 83 sequences; 35,818,201 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq28 136 6e-27 >seq28 Length=369090 Score = 136 bits (150), Expect = 6e-27 Identities = 421/637 (66%), Gaps = 16/637 (3%) Strand=Plus/Plus Query 203885 AGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGT 203944 || ||||||||||||||||| ||||| || ||| || | ||||||||| | | Sbjct 125859 AGGTAGTACATGCCGGTCTTGAGGCCGAGCTTCCAGCCAGCAAAGTGCATGGATGTGATC 125918 Query 203945 TTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGC 204004 |||| || | ||||| |||||| ||||| || |||||| || |||||| ||||| Sbjct 125919 TTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGATCGATG-AAGGC 125977 Query 204005 GCC-CGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAA 204063 || || || || ||||| | || ||||| ||| || |||||||| || |||||| | Sbjct 125978 TCCACGGTCAGCCGCCATCTGGACGATGGTGCGCTGGGAGATCTCCCAGACGGTCTTGTA 126037 Query 204064 CACGTCTCTGGTGT-GTTGAGGCACATCTT-CCCACGTCCT-GATCGAGCCGTTGTCGGC 204120 | | | || ||| | | || || || | | || ||| ||||| ||| || Sbjct 126038 GAGGGCCTTGATGTCGGCGGGG---ATGTTGGGGATATTCTGGATGGAGCCTCCGTCCGC 126094 Query 204121 CATCAGTCTCATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAG 204180 || | | || || | | || ||||| |||| || ||| ||| | || Sbjct 126095 GATGATGCGGTTCTTCATGTTGTCAGACCACAGTCCCATGTCGACCAGGTCCTTGAGCAA 126154 Query 204181 GTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGT 204240 |||||| | || || || || |||| ||| || | || | | | | |||| ||| Sbjct 126155 CCAGGGGTTAACGACTTGGAACTCGCCGGCCAGGACACGGCGCGAGTAGATGTTGGAGGT 126214 Query 204241 GAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGG 204300 | |||| || || ||||||| ||||| |||||| | |||| || ||||||||||| Sbjct 126215 GTATGGCTCAAAGCACTCGTTGAAGCCGAGAATCTGGGAGGTGGAAGCAGTGGGCATGGG 126274 Query 204301 AGCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCA 204360 || | |||||| |||||||| ||||||| | | || || ||| |||||| ||| Sbjct 126275 TGCAACGAGCAGAGAGTTGCGGACACCGTGCTGCTTGATCCGAACCTTGAGAGAGTCCCA 126334 Query 204361 GTCGTGCATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCC--TTGACTG 204418 ||| || | | || | ||||||||||| ||| | || | ||| | ||| Sbjct 126335 GTCCCACAGGTCGGTAGGAGTAACGCCCCACATATCGTATTGGAGCTCGCCCTTGGAC-- 126392 Query 204419 ACTGGGCTGCCCTTGTACGTCGGATAAG-GCTGATCCTCTTCTGCCAGCTTGCAC-GAGG 204476 ||||| |||| ||||||| || | || | || | |||||| | ||| |||| Sbjct 126393 ACTGGCGATCCCTCGTACGTCTCGTACGTGCCGTGAATC-TGGGCCAGC-TCCACGGAGG 126450 Query 204477 CGGCCATGGCGTGATAGTACATGGTCTCAAAGATCTG 204513 | | || || | ||| ||||||||||||||||| Sbjct 126451 CAGTCAAAGCACCGTGGTAGATGGTCTCAAAGATCTG 126487 Score = 100 bits (110), Expect = 5e-16 Identities = 304/460 (66%), Gaps = 26/460 (6%) Strand=Plus/Plus Query 204931 CTGCTGGTTAGACTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTC 204990 || |||||| ||||||||| || | ||||| |||| |||||| || |||| |||| Sbjct 126824 CTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTATACAACATGAAAGGGTTTCCTGTCTC 126883 Query 204991 CATCTGAGA-TCGCAGAATGTGGGTCCACAATTCGCGAGCCTCCA----CTTGCTTCACG 205045 ||||||| ||| || ||| | ||| | | | |||| | ||||| | | Sbjct 126884 AGTCTGAGACTCG-AGGATGGAGTACCAAAGCTTCTGGGCCTTGATGGTCTTGCGACCCT 126942 Query 205046 TACATCCCTTGAGACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCC 205105 ||| |||| |||||| ||| |||||| |||| ||| ||||| |||||| Sbjct 126943 TACCCTCCTT----CTCGTAGCCCTCGTAGAGCGCCTCAAACTCATCGCCGTAGACGTCC 126998 Query 205106 ATCAGCCCTGGACATTTTTTGGGACACATCAGAGACCACAT-CTGATCGTCTTTCACCCT 205164 || || || |||| ||||| ||||| |||| ||| | | || ||| || | Sbjct 126999 GCCAATCCAGGGCATTCGTTGGGGCACATGAGAGTCCAGGCGCCGTTCTTCTCA-ACACG 127057 Query 205165 CTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTC 205224 || ||| || || || |||||| || |||| || || |||||||| | | | | || Sbjct 127058 CTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAATAGGTCACGGGCACGGACTTCCTC 127117 Query 205225 GTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCAATG---TCGGCGTGCCACGGCTC 205281 | || |||||||| |||||||||| | | ||| | || || ||||| ||||| Sbjct 127118 CTTGCCGTGGTTCTTTCTCAAGTCCAGGAA---CTCAAAGACATCCGCATGCCATGGCTC 127174 Query 205282 TAACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTC----CACCATGCGAG 205337 | | | ||| | || || || | |||||| ||||||||||| ||| ||| | Sbjct 127175 AACGTAGATGGCGAAAGCACCGGGTCGCTTGTTACCACCCTGGTCAACGTACCTCGCG-G 127233 Query 205338 TCATCGCGTTGAAAACTCGCAGCATCGGCACCAGACCGTT 205377 | | |||||| || || ||||| || || | |||||| Sbjct 127234 TGTT---GTTGAAGACGCGGAGCATGGGAACGATACCGTT 127270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154375026480