Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016 -05-10] 83 sequences; 35,818,201 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq15 149 7e-31 seq20 131 2e-25 seq4 116 4e-21 >seq15 Length=1123021 Score = 149 bits (164), Expect = 7e-31 Identities = 148/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || || ||||| |||| |||||||||||||| ||||| Sbjct 653276 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCGAGCTGCTTGCCAGCGAA 653217 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| |||||||||||| | || | | |||||||||| |||||| ||||| | Sbjct 653216 GATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATT 653157 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||| ||| ||||| || | ||||| || ||||||||||| || || || Sbjct 653156 GTCGATAGTGTCGGACGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCAC 653097 Query 46582 AAAGATTTGCAT 46593 ||||||||||| Sbjct 653096 GAAGATTTGCAT 653085 >seq20 Length=799479 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || ||||||||||| || ||||| |||| || |||||||| || ||||| Sbjct 288305 CTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGCTGCTTACCAGCGAA 288246 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| |||||||||||| | || | || |||||||||| ||| ||| ||| | | Sbjct 288245 AATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATTTTCGACTTCACATT 288186 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||| ||| || || |||| |||||||| ||||| || || || || || Sbjct 288185 GTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTGAC 288126 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 288125 GAAGATCTGCAT 288114 Score = 122 bits (134), Expect = 1e-22 Identities = 131/171 (77%), Gaps = 2/171 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| || ||||| |||| ||||| |||||||||||||| Sbjct 288077 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAA 288018 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| || |||||||| | || | | ||||||||| |||||| |||||| ||| Sbjct 288017 GATCAGACGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTGCTCTTGA-CGT 287959 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCA 46571 | | | || ||| ||| || || || | |||||||| |||||||||| Sbjct 287958 TGTCGATGGTATCGGACGACTCGACCTCTAGGGTGATGGTCTTGCCCGTCA 287908 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||||||||| || |||||| || || |||||||| || || ||||| | || || Sbjct 288550 ACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTCC 288491 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||| || || || |||| |||||||||||| | || | | ||| || || Sbjct 288490 AGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGGATACCCTCTTTATCTTGA 288431 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 |||||| ||||| | | | || ||| |||||||| || | ||| || || ||| Sbjct 288430 ATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACCTCAAGCGTAATCGTCTTG 288371 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || || || ||||| || ||||| Sbjct 288370 CCCGTAAGAGTCTTGACAAAAATCTGCAT 288342 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || || || ||||| | || |||||||||||||| ||||| Sbjct 288761 CTCCTTCTGGATGTTGTAATCAGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAA 288702 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| |||||||||||| | || | | |||||| || |||||| ||||| | Sbjct 288701 AATCAGGCGCTGCTGGTCCGGAGGGATACCCTCCTTATCTTGGATCTTAGACTTGACGTT 288642 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | || || ||| || || |||| ||| || || || || || || || || || Sbjct 288641 ATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTCTTTCCAGTGAGAGTCTTGAC 288582 Query 46582 AAAGATTTGCAT 46593 ||||||||||| Sbjct 288581 GAAGATTTGCAT 288570 Score = 86.0 bits (94), Expect = 7e-12 Identities = 161/234 (69%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 46361 TATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAG 46420 |||| ||| || | | || | ||||| || | || |||||||| ||||| |||||| Sbjct 289030 TATTGGCCACCACGAAGGCGGAGCACCAAGTGAAGCGTGCTCTCCTTCTGGATGTTGTAG 288971 Query 46421 TCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCG 46480 ||| || || | | | || || |||||||| || || || |||| |||||||||||| Sbjct 288970 TCGCTCAGCGTCCTCCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCC 288911 Query 46481 GCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGA 46539 | || | | |||||| ||| ||||| ||||| ||| | | | ||||| || Sbjct 288910 GGTGGGATACCCTCCTTATCCTGAATCTTGGACTTGA-CGTTGTCAATGGTGTCCGAAGA 288852 Query 46540 TTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || | || ||||| || || |||| || || || || || ||||| Sbjct 288851 CTCAACCTCGAGAGTAATGGTCTTTCCAGTCAAGGTCTTGACGAAAATCTGCAT 288798 >seq4 Length=1854919 Score = 116 bits (128), Expect = 4e-21 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||||| |||||||| | || |||||||||||||| || || | Sbjct 704163 CCTTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGA 704104 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| |||||||||||| | || | | ||||||||| ||||||| ||||| | Sbjct 704103 TCAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGT 704044 Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583 | | || ||| || || || || | |||||||| |||||||||| || || || | Sbjct 704043 CGATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGA 703984 Query 46584 AG 46585 || Sbjct 703983 AG 703982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565237813565160