Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016
-05-10] 83 sequences; 35,818,201 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq2 233 2e-56
seq12 125 9e-24
seq23 102 1e-16
seq4 95.1 2e-14
>seq2
Length=2225852
Score = 233 bits (258), Expect = 2e-56
Identities = 501/744 (67%), Gaps = 10/744 (1%)
Strand=Plus/Minus
Query 7404 CTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAAT 7463
||||||| || || ||||| ||||| | | |||||| | ||| | |||||||
Sbjct 1325266 CTTTCTTGTGCTTGCGTTTGAACTCGTTAACGAAGTGGTTGACGAGACGGTTGTCGAAAT 1325207
Query 7464 CTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAA 7523
| |||||||||||||| || || || || || | ||||| || |||||||| | || |
Sbjct 1325206 CCTCACCACCCAAGTGAGTGTCACCGGCAGTGGACTTGACCTCGAAGATACCCTCGTCGA 1325147
Query 7524 TGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTAT 7583
|| | | | || ||||| || || |||||||| || || || || || ||||| |
Sbjct 1325146 TGCTGAGGAGAGAGACATCGAAAGTTCCACCACCAAGATCGAAGATCAGGACGTTGCGCT 1325087
Query 7584 CGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAA 7643
| | || ||||| || |||||||| || ||||| || || || || || || || |
Sbjct 1325086 CACCCTCGACCTTCTTGTCAAGACCGTAAGCAATAGCAGCGGCGGTAGGCTCGTTGATGA 1325027
Query 7644 TACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAAT 7703
|||| || ||| || || ||||| | ||||| || || || || || || || |
Sbjct 1325026 TACGGAGGACGTTGAGTCCGGCAATGAGACCGGCATCCTTGGTAGCCTGACGCTGGGAGT 1324967
Query 7704 CGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATT 7763
|||| ||||| || ||||| || || || || | |||| | ||||| || | |
Sbjct 1324966 CGTTGAAGTAAGCTGGGACGGTGACAACAGCATTGTTGACAGTTCCGCCGAGGTAGGCCT 1324907
Query 7764 CCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTT 7823
| || | || ||| ||| || | ||| || || ||||| || | | || | |
Sbjct 1324906 CAGCAGTCTCGCGCATCTTGACGAGGATCATGGAGGAGATCTCCTCGGGTGTGAAGTCCT 1324847
Query 7824 TCGTTTCACCGTTAAAATCAACTT--CAATCATGGGTTTATCCGCAGCACCGGGGATAAC 7881
| || || || || || || || | ||| | ||| || || | | | ||| |
Sbjct 1324846 TGGTCTCGCCCTTGAACTCGACCTGGCAAAC-TGGCTT--GCCTC--CCTTGTCGATGAT 1324792
Query 7882 CTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGAT 7941
||| | | | | ||||| ||| | ||||||| ||| | ||||| | |||||
Sbjct 1324791 CTTGAAGGGGAAGTGCTTCATGTCGGCCTGGACCTCGGCGTCGGCGAACTTGCGACCGAT 1324732
Query 7942 AAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGC 8001
|||||||| || || || || ||||| ||||||||||| ||||||||| || ||
Sbjct 1324731 CAGACGCTTGGCGTCGAAGACGGTGTTGGCTGGGTTCATGGCGACTTGGTTCTTGGCGGC 1324672
Query 8002 GTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATT 8061
|| ||||||||||| || | || || || || ||| |||| ||||| || || ||
Sbjct 1324671 ATCACCGATAAGACGCTC---GGTGTCAGTGAAGGCAACGAACGAGGGGGTTGTGCGGTT 1324615
Query 8062 CCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATA 8121
|| |||||||| ||||| || || | |||||| | | ||| || |||||||| ||
Sbjct 1324614 GCCCTGGTCGTTGGCAATGATCTCAATGCGGTCATCTCTGAAGATACCCACGCACGAGTA 1324555
Query 8122 CGTTGTTCCTAAATCAATACCGAT 8145
|| || || ||||| ||||||||
Sbjct 1324554 GGTGGTACCCAAATCGATACCGAT 1324531
Score = 136 bits (150), Expect = 5e-27
Identities = 249/365 (68%), Gaps = 0/365 (0%)
Strand=Plus/Minus
Query 7022 ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTC 7081
||||| || ||||| | || ||||| || || |||||||| ||||| || | || ||
Sbjct 1325703 ATGGCAGCCTGGACGGCAGCTCCGTAAGCCACAGCCTCATCAGGGTTGATGGACTTGTTG 1325644
Query 7082 AGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGAT 7141
| || || ||||| || || || | | | | || ||| ||||||| || || ||
Sbjct 1325643 GGCTCCTTGCCGTTGAAGTAGTCGGTGATGAGCTTCTGGATTCTCGGGATACGGGTGGAG 1325584
Query 7142 CCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTT 7201
|| ||||| | ||||| || | || || | || |||| ||| | |||| ||
Sbjct 1325583 CCTCCGACGAGGACGATCTCGTGAACCTTGGTCTTGTCGAGCTTGGCGTCTGAGAGGACG 1325524
Query 7202 TTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCA 7261
||||| || | | | |||||| | |||| ||||||||||||||||| |||
Sbjct 1325523 CGGTCGACGGGCTGAAGAGTAGAACGGAAGAGGTCCTGGCACAGTTCCTCAAAACGGGCA 1325464
Query 7262 CGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTT 7321
||||| || || || |||||||| || || ||| | | || || || || |||| ||
Sbjct 1325463 CGGGTGATTGAGGTGTAGAAATCGACACCCTCGAAGAGAGAGTCGATCTCGATGGAAGTC 1325404
Query 7322 TGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGG 7381
|| || | || || | || ||||| || ||||| || || || || | |||||| |||
Sbjct 1325403 TGGGCTGAAGACGAAAGAGTGCGCTTGGCACGCTCGCATGCTGTGCGGAGACGACGGAGG 1325344
Query 7382 GCACG 7386
|||||
Sbjct 1325343 GCACG 1325339
>seq12
Length=1155464
Score = 125 bits (138), Expect = 9e-24
Identities = 241/355 (68%), Gaps = 9/355 (3%)
Strand=Plus/Minus
Query 7404 CTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAAT 7463
|||||||| || | || ||||| | |||||| |||||| | | |||||||
Sbjct 322008 CTTTCTTAGTCTTCCTTTGGAACTCCTTCTTGAAGTGCTCAAGGAGGTTGGTGTCGAAAT 321949
Query 7464 CTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAA 7523
| | |||||||||||| || || || || || || ||||| |||| ||| || | |
Sbjct 321948 CCTGACCACCCAAGTGGGTGTCACCAGCAGTGGCCTTGACGGTGAAGACACCGCCCTGGA 321889
Query 7524 TGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTAT 7583
|||| | | || ||||| || || |||||||| || || | ||||| ||||| |
Sbjct 321888 TGTTCAGGAGGGAGACATCGAAAGTTCCACCACCGAGATCGTAGATGAGAACGTTACGCT 321829
Query 7584 CGTCGTCTTTGTTCTT------ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCAT 7637
| | | | | ||| | |||||||||| ||||| || || || || || || |
Sbjct 321828 CCTTGGC---GGACTTTCCGGAACCGAGACCGTAGGCGATGGCAGCGGCGGTAGGCTCGT 321772
Query 7638 TAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTT 7697
| || ||||| ||| ||| ||||||||||| | | || || || || || || || |
Sbjct 321771 TGATGATACGGAGAACGTTGAGGCCAGCAATGGCACCGGCGTCCTTGGTAGCCTGACGCT 321712
Query 7698 GCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752
| ||||| |||||||| ||||| || | ||| || | | ||| ||||| ||
Sbjct 321711 GGTTGTCGTTGAAGTAGGCTGGGACAGTGATGACGGCCTTGGAGACCTTCTTGCC 321657
>seq23
Length=600608
Score = 102 bits (112), Expect = 1e-16
Identities = 132/182 (73%), Gaps = 3/182 (2%)
Strand=Plus/Minus
Query 7964 GTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTA 8023
||||| || |||||| || | ||||||||| || ||||| |||| || || || |
Sbjct 344944 GTGTTCTTTGGGTTCGCAGCGGCTTGGTTCTTTGCTGCGTCTCCGACCAGGCGCTCCTCC 344885
Query 8024 TTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATT 8083
| |||| ||||||||||| |||||||| ||| | ||||||||||| | | |||
Sbjct 344884 T---CCGTGAACGCGACGTAAGATGGGGTAATTCTGTGACCTTGGTCGTTGACGAGAATC 344828
Query 8084 TCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCG 8143
|| || | | || ||| || ||||| || || || || ||||| ||||||||||||
Sbjct 344827 TCGACCTTGCCATTCTGCATCACACCGACACAAGAGTAAGTGGTTCCCAAATCAATACCG 344768
Query 8144 AT 8145
||
Sbjct 344767 AT 344766
>seq4
Length=1854919
Score = 95.1 bits (104), Expect = 2e-14
Identities = 111/148 (75%), Gaps = 4/148 (3%)
Strand=Plus/Minus
Query 7597 CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTT 7656
||| || |||||||| |||| ||| || || || ||||| || | | ||| ||| |||
Sbjct 804979 CTTTTCAAGACCGTATGCGAGAGCTGCTGCGGTAGGTTCGTTGACGACACGGAGAACGTT 804920
Query 7657 CAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714
||||||||||| ||| | ||||| || || ||||| || || || ||||| |||||
Sbjct 804919 AAGGCCAGCAAT--TTGACCGGCATCCTTGGTGGCTTGACGCTGGGAGTCGTTGAAGTAA 804862
Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGA 7742
|||||||| || || || |||| | |||
Sbjct 804861 GCCGGGACGGTAACAACGGCGTTCTTGA 804834
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635132141049720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |