Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016 -05-10] 83 sequences; 35,818,201 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq28 194 2e-44 seq13 102 1e-16 seq20 87.8 2e-12 seq8 87.8 2e-12 seq7 86.0 7e-12 >seq28 Length=369090 Score = 194 bits (214), Expect = 2e-44 Identities = 1166/1848 (63%), Gaps = 53/1848 (3%) Strand=Plus/Plus Query 109399 GCCTTCGAGCGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATA-TG 109457 ||| | | ||| || || ||||| || || ||||| || |||||| || || | || Sbjct 125847 GCCATGGTGCGGAGGTAGTACATGCCGGTCTTGAGGCCGAGCTTCCA-GCCAGCAAAGTG 125905 Query 109458 CATTGAAGAGAGTTTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTG 109517 ||| || | || ||| | ||| || || ||| | ||| | ||||| ||||| Sbjct 125906 CATGGATGTGATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTG 125965 Query 109518 ATCGATGAATCGACCACGATCAGCCGCCATGT---CGATGATACACTTTTGGCTAATTTC 109574 ||||||||| ||||| ||||||||||| | ||||| | | || || || || Sbjct 125966 ATCGATGAAGGCTCCACGGTCAGCCGCCATCTGGACGATGGTGCGCT---GGGAGATCTC 126022 Query 109575 CCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGA 109634 |||||| |||||||| | |||||| || |||| |||| ||| || || || || Sbjct 126023 CCAGACGGTCTTGTAGAGGGCCTTGATGTCGGCGGGGATGTTGGGGATATTCTGGATGGA 126082 Query 109635 GCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAG 109694 ||| || || | ||| | | |||||| | | ||||| || || | | || Sbjct 126083 GCCTCCGTCCGCGATGATGCGGTTCTTCATGTTGTCAGACCACAGTCCCATGTCGACCAG 126142 Query 109695 ATCGT----CAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGA 109750 || | |||| || | || || || || || || || || || || Sbjct 126143 GTCCTTGAGCAACCAGGGG----TTAACGACTTGGAACTCGCCGGCCAGGACACGGCGCG 126198 Query 109751 GGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGG 109810 ||||||||| | ||||| || || || ||||| ||| ||| || || || | |||| Sbjct 126199 AGTAGATGTTGGAGGTGTATGGCTCAAAGCACTCGTTGAAGCCGAGAATCTGGGAGGTGG 126258 Query 109811 AAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCT 109870 |||| ||||||||||| || | ||| ||| ||| |||| ||| | | ||| | ||| Sbjct 126259 AAGCAGTGGGCATGGGTGCAACGAGCAGAGAGTTGCGGACACCGTGCTGCTTGATCCGAA 126318 Query 109871 CACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTG 109930 | | | |||||| || | | | || ||| | || ||||||||| Sbjct 126319 CCTTGAGAGAGTCCCAGTCCCACAGGTCGGTAGG---AGTAACGCC---CCACATATCGT 126372 Query 109931 GTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCT 109990 ||| || | |||| | | || || |||| | | ||||||||| || | || || Sbjct 126373 ATTGGAGCTCGCCCTTGGACACTGGCGATCCCTCGTACGTCTCGTACGTGCCGTGAATCT 126432 Query 109991 CGGCCAACTC---GGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAG 110047 ||||| ||| ||| | || | || ||| || || || |||||||| || || | Sbjct 126433 GGGCCAGCTCCACGGAGGCAGTCAA-AGCACCG--TGGTAGATGGTCTCAAAGATCTGGG 126489 Query 110048 CATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAAACACATCCG 110107 || | || | ||| | | ||||||||||| | | | | || |||| | Sbjct 126490 AGTTGAGGAACTTGGCCTCGGGAGAATCGAAGGGAAGGCGAAGAGCCAGGAATGCATCAG 126549 Query 110108 CTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTT 110167 | |||||||| ||||| | ||| || | || | ||| ||| | || | Sbjct 126550 CAAGACCCTGGACACCAACGGCAACTGGCCTGTGACGGAAGTTGCTGCGCCTGGCCTCCT 126609 Query 110168 CTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGA 110227 | |||||||| ||||| ||| |||| | || | ||||| ||| || |||| Sbjct 126610 CGACGGGGTAGTAGTTGACGTCAATGATCTTGTTCAAGTTCTTAACAACAACCTGTGTGA 126669 Query 110228 TTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGAG 110287 ||||| || || | | | || | || | || | | || || | || || | Sbjct 126670 CCTCATGAAGCTTCTGGAAGTCATATGTGCCGTTGGCCATGTCAACGTACGTCGGCAGGG 126729 Query 110288 CAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCG 110347 ||| ||| || | || ||||| | ||| || | | | ||| || | || || | Sbjct 126730 CAAGAGATGCCAAGTTACACACGGCCACCTCATCCGGGGCAGAGTACTCGACGATCTCTG 126789 Query 110348 TACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATG 110407 | |||| |||||| || ||| ||| | ||||||||| || ||| |||||| | Sbjct 126790 TGCACAGGTTGGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAG 126849 Query 110408 CATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCC 110467 |||||||||| | |||| | ||| | || || || ||||| |||| ||| |||| | || Sbjct 126850 CATCCTTATACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGGATGGAGTACC 126909 Query 110468 ATA-CATCGGCGGCGGGGACAGT--TGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGT 110524 | | | || | ||| || || |||| | | ||| |||| |||||| || Sbjct 126910 AAAGCTTCTG-GGCCTTGATGGTCTTGCG--ACCCTTACCCTCCTTCTCGTAGCCCTCGT 126966 Query 110525 ACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTT-GTCGGGACAG 110583 | | ||||||| || | ||||| || || | | | || || || || ||| || Sbjct 126967 AGAGCGCCTCAAACTCATCGCCGTAGACGTCCGCCA-ATCCAGGGCATTCGTTGGGGCAC 127025 Query 110584 AAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATC 110643 | ||| | ||| || || |||||| | ||||||||| || || || ||||| | Sbjct 127026 ATGAGAGTCCAGGCGCCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAGAGA 127085 Query 110644 GCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAA 110703 || |||| ||||||||| ||| | || || | || ||||| | | |||| Sbjct 127086 GCGTAGAATAGGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCAAGTCCAGG 127145 Query 110704 AAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGAT------GGATCCCTTA 110757 || || | || ||||| |||||||| || | |||| |||| || || ||| Sbjct 127146 AACTCAAAGACATCCGCATGCCATGGCTCAACGTAGATGGCGAAAGCACCGGGTCGCTTG 127205 Query 110758 CGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATA 110817 || |||| |||| ||| || | || ||| |||||||| | |||||| |||| Sbjct 127206 TTACCACCC---TGGTCAACGTACCTCGCGGTGTTGTTGAAGACGCGGAGCATGGGAACG 127262 Query 110818 ATTCCATCGGATTGACCATTTGTACCCCTAAT-TCTGGACTTATTGGCACGAATGTCGTG 110876 || || | || | ||||| ||||| ||| | || || | ||||||| || || Sbjct 127263 ATACCGTTCGAGTTTCCATTGGTACCGGCAATGTATGCACC-AGTGGCACGGATACGATG 127321 Query 110877 GATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC-TCTGTGAGTGTAC 110935 ||| | | || ||||| || || ||| || ||||| ||| |||| || Sbjct 127322 GATGTTTAATCCGATACCTCCAGCAGTCTTTGAGATCATGGCACATGTCT-TGAGCGTGT 127380 Query 110936 CATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAG 110995 |||| ||||| ||||| ||| |||| || | | | ||||| || |||| ||| | Sbjct 127381 CATAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTGGG 127440 Query 110996 GACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGG--GA 111053 | || || || |||||||||||||| || | || || ||| || |||| || Sbjct 127441 CCTGTGGTGTACCAGCATTGAAGAGTGTTGGGGAAGCGTGTGTGA--AGTATTTGGAAGA 127498 Query 111054 CATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAAC 111113 ||| ||||||||| ||| || | ||| | |||||||| || | ||||| Sbjct 127499 CATGAGGTTGTATGTCTCGGTTGTCTTCTCAATATCCTCGCCGTGAATGCCCACCGCAAC 127558 Query 111114 TCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTGAAGGTAACT 111173 ||||| | ||| | || || | || | ||| ||||||| || |||| || Sbjct 127559 ACGCATAATCATGTGCTGTGGTCTCTCAGCAACCTTGCCATCAAGGCGGAGAAGATACGA 127618 Query 111174 CTTCTCTAGGGTCTTGAGACCAAAGTATCCAAAATCGAAATCACGATC 111221 ||| || ||||||| || |||||| | | |||||||||||| Sbjct 127619 TCGCTCAAGAGTCTTGAAGCCGAAGTATTGGTAGTTGAAATCACGATC 127666 >seq13 Length=1144523 Score = 102 bits (112), Expect = 1e-16 Identities = 277/417 (66%), Gaps = 13/417 (3%) Strand=Plus/Plus Query 11588 TGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGG 11647 ||| ||| |||||||| || ||||| | |||||| | ||| || ||||| ||||| Sbjct 338555 TGTTGAAGCCGTCCATCTCCGTGAGGATCTGGTTCAGCGTGCTCTCGCGCTCCTCGTT-- 338612 Query 11648 AGGGCATACCA--CCTGCCGAA---CGCTTCTTACCGACAGCGTCAATCTCATCGATGAA 11702 | || | | | || | | | | |||||||| ||||| || || |||||||| Sbjct 338613 ACCGCCTCCAAAGCCAGACTTCTCTCTCGACTTACCGATCGCGTCGATTTCGTCGATGAA 338672 Query 11703 TACGATACACGGTTGGTTGGCA--CGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCT 11760 | |||||| || ||||| | || ||| |||| || || || |||||| || Sbjct 338673 GATGATACAAGG--GGTTGTCTTGCGCGCCATGGCGAACAGGTCGCGCACACGCGACGGA 338730 Query 11761 CCAACACCTACGAACATCTCAACGAAGTTTGCGGCA-GAACACTGAATGAAGGGAACATT 11819 || ||||| ||||||||||| | ||| | | || || ||||| |||||| || Sbjct 338731 CCGACACCGACGAACATCTCCATGAACTCGGAACCACTGACGCTGAA-GAAGGGCACGCC 338789 Query 11820 AGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAG 11879 ||||| || || | || || || || |||||||| || || || | |||| || Sbjct 338790 GGACTCGCCGGCCGTAGCCTTCGCCAGCAGGGTCTTACCGGTTCCGGGAGGCCCAGACAG 338849 Query 11880 AAGGGCGCCACGGGGGATCTTGGCACCACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAA 11939 | || || ||||| |||||||| || | |||||||||| || |||| ||||| Sbjct 338850 GATAGCACCGCGGGGAATCTTGGCGCCTAGCCTCGAGTAGCGCTCTGGAGTCTTCAGGAA 338909 Query 11940 GTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAGTCGATACCCTCAACATCGGTGAA 11996 | || | |||| | |||| ||| || ||| || || | ||||||| ||| Sbjct 338910 GCTGACGAACTCCATGATTTCCAGCTTTGCCTCGTCCATGCCAGCGACATCGGCGAA 338966 >seq20 Length=799479 Score = 87.8 bits (96), Expect = 2e-12 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 385783 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 385842 Query 136777 GGGAACAG 136784 | || ||| Sbjct 385843 GTGACCAG 385850 Score = 84.2 bits (92), Expect = 3e-11 Identities = 185/271 (68%), Gaps = 10/271 (4%) Strand=Plus/Minus Query 11735 CGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGG 11794 |||| || || || || ||||| || || ||||| ||| | ||||| |||| || | | Sbjct 333624 CGAAGAGCTCGCGGACGCGCTTGGCGCCGACACCAACGTAGATCTCGTCGAA-TTCACTG 333566 Query 11795 CAGAACACTGAAT--GAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGT 11852 | | ||| |||| |||||| || | ||| ||||| | || || || |||||||| Sbjct 333565 CCGGACA-TGAAGAAGAAGGGGACGCCTGCCTCGCCAGCCACCGCGCGTGCTAGGAGAGT 333507 Query 11853 CTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACT--T 11910 ||| || ||||| || | || |||| || | || ||| | ||| |||| | Sbjct 333506 CTTTCCGGTACCGGGAGGGCCGACGAGGAGAACACCCTTGGGAAGTTTGCCACCGAGAGT 333447 Query 11911 CCA-AAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGC 11969 | | || | || | || ||||||||||| ||||||| ||||| | |||||||||||| Sbjct 333446 CGAGAACTTGCCC---GGGTTCTTGAGGAAATCCACAAGCTCCTGCAATTCCTCCTTGGC 333390 Query 11970 GGAGTCGATACCCTCAACATCGGTGAAACGA 12000 |||| || | ||||| | ||| ||| Sbjct 333389 CTCGTCGCAGCCATGCACATCAGAGAAGCGA 333359 >seq8 Length=1468440 Score = 87.8 bits (96), Expect = 2e-12 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 555741 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 555682 Query 136777 GGGAACAG 136784 | || ||| Sbjct 555681 GTGACCAG 555674 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 555078 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 555137 Query 136777 GGGAACA 136783 | || || Sbjct 555138 GTGACCA 555144 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 556041 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 555982 Query 136777 GGGAACA 136783 | || || Sbjct 555981 GTGACCA 555975 >seq7 Length=1683714 Score = 86.0 bits (94), Expect = 7e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 56437 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 56378 Query 136777 GGGAACA 136783 | || || Sbjct 56377 GTGACCA 56371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975388937400