Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016 -05-10] 83 sequences; 35,818,201 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq28 250 3e-61 seq3 140 4e-28 seq71 136 5e-27 seq25 84.2 3e-11 >seq28 Length=369090 Score = 250 bits (276), Expect = 3e-61 Identities = 1162/1811 (64%), Gaps = 45/1811 (2%) Strand=Plus/Plus Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATA-TGCATAGAAGA 105648 ||||| |||||||| ||||||||||| || | ||||| || || | ||||| || | Sbjct 125856 CGGAGGTAGTACATGCCGGTCTTGAGGCCGAGCTTCCA-GCCAGCAAAGTGCATGGATGT 125914 Query 105649 GAGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCAT--ACTTTGACTCTGGTCAATG 105706 || |||| ||| ||||| | |||| | || | ||| |||| | || ||| Sbjct 125915 GATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGGGACTGGGACT--GATCGATG 125972 Query 105707 AAGCGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTG---ATTTCCCACACT 105763 ||| ||||| | |||||||| | | || | | | || | || ||||| || Sbjct 125973 AAGGCTCCACGGTCAGCCGCCATCTGGACGA--TGGTGCG-CTGGGAGATCTCCCAGACG 126029 Query 105764 GTGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCC 105823 || |||||| |||||| || | ||||| | | |||||| || || || || || Sbjct 126030 GTCTTGTAGAGGGCCTTGATGTCGGCGGGGATGTTGGGGATATTCTGGATGGAGCCTCCG 126089 Query 105824 GCCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTG 105883 || || ||| | | |||||| | | ||||| || || || | || || ||| Sbjct 126090 TCCGCGATGATGCGGTTCTTCATGTTGTCAGACCACAGTCCCATGTCGACCAGGTCCTTG 126149 Query 105884 ACGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTC 105943 | | ||| || | ||||| || || ||| | | | |||||||| Sbjct 126150 AGCAACCAGGGGTTAACGACTTGGAACTCGCCGGCCAGGACACGGCGCGAGTAGATGTTG 126209 Query 105944 GTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGC 106003 | ||||| || |||||||| || || || | || || | |||||| || || ||| Sbjct 126210 GAGGTGTATGGCTCAAAGCACTCGTTGAAGCCGAGAATCTGGGAGGTGGAAGCAGTGGGC 126269 Query 106004 ATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACA 106063 || ||||| | | ||| ||| || | ||| | | |||||| || |||||||| Sbjct 126270 ATGGGTGCAACGAGCAGAGAGTTGCGGACACCGTGCTGCTTGATCCGAACCTTGAGAGAG 126329 Query 106064 TCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTG 106122 |||||||| | | | | || | || |||||||||| |||| ||| | || | Sbjct 126330 TCCCAGTCCCACAGGTCGGTAGGAGTAACGC-CCCACATATCGTATTGGAGCTCGCCCTT 126388 Query 106123 GGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCT 106182 |||| || || ||||| | ||||| || | || || | |||| || | Sbjct 126389 GGACACTGGCGATCCCTCGTACGTCTCGTACGTGCCGTGAATCTGGGCCAGCTCCACGGA 126448 Query 106183 CGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTC 106242 || || | |||| || ||||| |||||||| | | || | |||||| || Sbjct 126449 GGCAGTCAAAGCACCGTGGTAGATGGTCTCAAAGATCTGGGAGTTGAGGAACTTGGCCTC 126508 Query 106243 ATCTGAATCAAATGCGTAGCGGCACAAA-ATAAATACATCCGCGAGACCTTGAACACCCA 106301 ||||| || | | || | | | | ||| |||| || ||||| || ||||| | Sbjct 126509 GGGAGAATCGAAGG-GAAGGCGAAGAGCCAGGAATGCATCAGCAAGACCCTGGACACCAA 126567 Query 106302 AACCAATAGGTCTGTGTCGCATATTAGACTTTCGC---GCAGTCTCAACGGGATAAAAAT 106358 ||| || ||||| || | || | ||| || ||| ||||| || | | Sbjct 126568 CGGCAACTGGCCTGTGACGGAAGTTGC---TGCGCCTGGCCTCCTCGACGGGGTAGTAGT 126624 Query 106359 TTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTT 106418 | |||||||| ||| | || || ||||| || ||||| |||||||| || | Sbjct 126625 TGACGTCAATGATCTTGTTCAAGTTCTTAACAACAACCTGTGTGACCTCATGAAGCTTCT 126684 Query 106419 CATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAAT 106478 | ||| | |||| | | | || ||| | || ||||| | |||||||| | Sbjct 126685 GGAAGTCATATGTGCCGTTGGCCATGTCAACGTACGTCGGCAGGGCAAGAGATGCCAAGT 126744 Query 106479 TGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAAC 106538 | || || ||| ||||||| | | |||||| | || ||||| |||| |||||| | Sbjct 126745 TACACACGGCCACCTCATCCGGGGCAGAGTACTCGACGATCTCTGTGCACAGGTTGGAGC 126804 Query 106539 TCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCA 106598 | || || || | ||||| ||||| ||||| |||||| |||||||| || | || Sbjct 126805 TGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTATACAACA 126864 Query 106599 TGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCT 106657 || | || | || ||||| ||||| |||| ||| || | | ||| | | || | | || Sbjct 126865 TGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGGATGGAGTACCAAAGCTTCTGGGCCT 126924 Query 106658 GGTACAATGGCGTTGG--CCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAAC 106714 | |||| ||| ||| | |||||| |||||| |||||| || |||||| Sbjct 126925 TG----ATGGTCTTGCGACCCTTACCCTCCTTCTCGTAGCCCTCGTAGAGCGCCTCAAAC 126980 Query 106715 TCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCATTG 106773 || || || |||| | | || || || || || || || | |||| ||| Sbjct 126981 TCATCGCCGTAGACGTCCGCCAATCCAGG-GCATTCGTTGGGGCACATGAGAGTCCAGGC 127039 Query 106774 ACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATC 106833 || || |||||| ||||||||||| || || || ||||| || | | || || || Sbjct 127040 GCCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAATAGGTC 127099 Query 106834 TCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATAT 106892 | ||| || | || || | || ||||| || || || |||||||| | || || Sbjct 127100 ACGGGCACGGA-CTTCCTCCTTGCCGTGGTTCTTTCTCAAGTCCAGGAACTCAAAGACAT 127158 Query 106893 CCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC---CCAGCTTGAT 106949 |||| ||||||||||||| |||| |||| || || ||| ||| | || | Sbjct 127159 CCGCATGCCATGGCTCAACGTAGATGGCGAAAGCACCGGGTCGCTTGTTACCACCCTGGT 127218 Query 106950 TTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGAC 107009 || || | ||| ||| ||| || ||||| ||||| |||| ||||| | || | | Sbjct 127219 CAACGTACCTCGCGGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCGTTCGAGTTTC 127278 Query 107010 CATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATAC 107069 |||| || || ||| | | |||| | | | |||||||| | || |||| Sbjct 127279 CATTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGATGGATGTTTAATCCGATAC 127338 Query 107070 CCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTG 107129 | ||||| ||||||||| ||||| | | || || |||||||||| | || Sbjct 127339 CTCCAGCAGTCTTTGAGATCATGGCACATGTCTTGAGCGTGTCATAGATACCCTCAATAC 127398 Query 107130 AGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT-TGGTGTACCAGCA 107188 |||||||| || ||| | |||||| |||| ||| || || ||||||||||||| Sbjct 127399 TATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTG-GGCCTGTGGTGTACCAGCA 127457 Query 107189 TTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG--GACATCTTGTCGTATGTCT 107246 |||||||| ||||| | ||||| |||| || |||| ||||| || |||||||| Sbjct 127458 TTGAAGAGTGTTGGGGAAGCGTGTGTGAA-GTA-TTTGGAAGACATGAGGTTGTATGTCT 127515 Query 107247 CCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATT 107306 | ||||| || || ||||| ||||| | || |||||||||| ||||| | Sbjct 127516 CGGTTGTCTTCTCAATATCCTCGCCGTGAATGCCCACCGCAACACGCATAATCATGTGCT 127575 Query 107307 GGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATA-GCTCTTCTCAAGGGTTTTG 107365 | ||| | || | ||||||| || || ||||||| | || |||||| || ||| Sbjct 127576 GTGGTCTCTCAGCAACCTTGCCATCAAGGCGGAGAAGATACGATC-GCTCAAGAGTCTTG 127634 Query 107366 AGACCAAAGTA 107376 | || ||||| Sbjct 127635 AAGCCGAAGTA 127645 >seq3 Length=1861714 Score = 140 bits (154), Expect = 4e-28 Identities = 342/510 (67%), Gaps = 9/510 (2%) Strand=Plus/Minus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 |||||||||||| || ||||| || || || || |||||| ||||| | |||||| || Sbjct 165207 GTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGGTCAGGCCGGCCATGAGGCC 165148 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||| | ||| |||| | | ||| || |||||||||||||||||||| || Sbjct 165147 ACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCAACGGC 165088 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCATTTCATTG 117463 || || |||| ||||||| ||||||| | || | |||| | | ||| | | || Sbjct 165087 GGCGAAGGCAACGAGGCGCTGAGCGAAGGTG-GAATCCTTGTCTTGGATCCACCTAACTG 165029 Query 117464 CCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCT 117523 |||| | |||||||||| ||| || || | || | |||||| | || | | | Sbjct 165028 CCCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGATGGCATTGAAGAGGTATGTGC 164969 Query 117524 TTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAACCA 117583 || || | ||||| |||||| |||| || | || ||||| ||| | |||| Sbjct 164968 GTTGAGCTTGTTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGAATGT 164909 Query 117584 TTTC-ATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGCACTTCATCC 117642 | || || || | ||| | ||||||| |||| ||||| || || || || | Sbjct 164908 TCTCTATCAT-GATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGATTTGGACCTC-GCT 164851 Query 117643 GCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCAG 117701 || || | | || |||||| |||||||| || ||| | || ||||| || || Sbjct 164850 GCTGAAGCGCTCGAGGAGATTCTCGTTGACAATTCCGTCTGACGCGGCGAAGAAAGCGAG 164791 Query 117702 GATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCAGTCGTCAAGATC 117758 | || ||||| | |||| ||||| | || | |||||||||| ||| || Sbjct 164790 AACGTGGGAAATGAAGTAACGCTCATCGTCATTGAGGCGGTTGTTCCAGTCGTGAAGGTC 164731 Query 117759 TTTGGACAAATCAACTTCTTCCGCAGTCCA 117788 ||||| | ||||| || || || ||||| Sbjct 164730 CTTGGAGAGATCAATCTCCTCTGCCGTCCA 164701 Score = 140 bits (154), Expect = 4e-28 Identities = 342/510 (67%), Gaps = 9/510 (2%) Strand=Plus/Minus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 |||||||||||| || ||||| || || || || |||||| ||||| | |||||| || Sbjct 175063 GTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGGTCAGGCCGGCCATGAGGCC 175004 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||| | ||| |||| | | ||| || |||||||||||||||||||| || Sbjct 175003 ACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCAACGGC 174944 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCATTTCATTG 117463 || || |||| ||||||| ||||||| | || | |||| | | ||| | | || Sbjct 174943 GGCGAAGGCAACGAGGCGCTGAGCGAAGGTG-GAATCCTTGTCTTGGATCCACCTAACTG 174885 Query 117464 CCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCT 117523 |||| | |||||||||| ||| || || | || | |||||| | || | | | Sbjct 174884 CCCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGATGGCATTGAAGAGGTATGTGC 174825 Query 117524 TTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAACCA 117583 || || | ||||| |||||| |||| || | || ||||| ||| | |||| Sbjct 174824 GTTGAGCTTGTTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGAATGT 174765 Query 117584 TTTC-ATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGCACTTCATCC 117642 | || || || | ||| | ||||||| |||| ||||| || || || || | Sbjct 174764 TCTCTATCAT-GATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGATTTGGACCTC-GCT 174707 Query 117643 GCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCAG 117701 || || | | || |||||| |||||||| || ||| | || ||||| || || Sbjct 174706 GCTGAAGCGCTCGAGGAGATTCTCGTTGACAATTCCGTCTGACGCGGCGAAGAAAGCGAG 174647 Query 117702 GATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCAGTCGTCAAGATC 117758 | || ||||| | |||| ||||| | || | |||||||||| ||| || Sbjct 174646 AACGTGGGAAATGAAGTAACGCTCATCGTCATTGAGGCGGTTGTTCCAGTCGTGAAGGTC 174587 Query 117759 TTTGGACAAATCAACTTCTTCCGCAGTCCA 117788 ||||| | ||||| || || || ||||| Sbjct 174586 CTTGGAGAGATCAATCTCCTCTGCCGTCCA 174557 >seq71 Length=14946 Score = 136 bits (150), Expect = 5e-27 Identities = 342/510 (67%), Gaps = 10/510 (2%) Strand=Plus/Plus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 |||||||||||| || ||||| || || || || |||||| ||||| | |||||| || Sbjct 12523 GTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGGTCAGGCCGGCCATGAGGCC 12582 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||| | ||| |||| | | ||| || |||||||||||||||||||| || Sbjct 12583 ACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCAAC-GG 12641 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCATTTCATTG 117463 || || |||| ||||||| ||||||| | || | |||| | | ||| | | || Sbjct 12642 GGCGAAGGCAACGAGGCGCTGAGCGAAGGTG-GAATCCTTGTCTTGGATCCACCTAACTG 12700 Query 117464 CCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCT 117523 |||| | |||||||||| ||| || || | || | |||||| | || | | | Sbjct 12701 CCCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGATGGCATTGAAGAGGTATGTGC 12760 Query 117524 TTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAACCA 117583 || || | ||||| |||||| |||| || | || ||||| ||| | |||| Sbjct 12761 GTTGAGCTTGTTCCTTGATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGCGTGAATGT 12820 Query 117584 TTTC-ATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGCACTTCATCC 117642 | || || || | ||| | ||||||| |||| ||||| || || || || | Sbjct 12821 TCTCTATCAT-GATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGATTTGGACCTC-GCT 12878 Query 117643 GCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCAG 117701 || || | | || |||||| |||||||| || ||| | || ||||| || || Sbjct 12879 GCTGAAGCGCTCGAGGAGATTCTCGTTGACAATTCCGTCTGACGCGGCGAAGAAAGCGAG 12938 Query 117702 GATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCAGTCGTCAAGATC 117758 | || ||||| | |||| ||||| | || | |||||||||| ||| || Sbjct 12939 AACGTGGGAAATGAAGTAACGCTCATCGTCATTGAGGCGGTTGTTCCAGTCGTGAAGGTC 12998 Query 117759 TTTGGACAAATCAACTTCTTCCGCAGTCCA 117788 ||||| | ||||| || || || ||||| Sbjct 12999 CTTGGAGAGATCAATCTCCTCTGCCGTCCA 13028 >seq25 Length=557695 Score = 84.2 bits (92), Expect = 3e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 |||||| ||||| | |||| || || || || |||||| || || | |||||| || Sbjct 29570 GTGGAGGCCCTCGTTATGGGATATGAGCTCGTTCGAGAAGGTCAGACCAGCCATGAGGCC 29629 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 ||||| || | ||| |||||| | ||| || |||||||||||||||||||| || Sbjct 29630 ACGCTTGTTGAGCCAGAAAATAGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCAACGGC 29689 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGG 117433 || || |||| || |||| || |||| Sbjct 29690 AGCGAAGGCAACGAGACGCTGAGCAAAGG 29718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980187894920