Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016
-05-10] 83 sequences; 35,818,201 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq20 145 2e-29
seq15 143 6e-29
seq4 116 8e-21
>seq20
Length=799479
Score = 145 bits (160), Expect = 2e-29
Identities = 158/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
||| || || || || ||||| || ||||| ||||| || | || || | ||||| ||
Sbjct 288551 AACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGTGCGGCCATCCTC 288492
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
||||||||||| || ||||| || || || ||||| ||||| || || ||||| |||||
Sbjct 288491 CAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGGATACCCTCTTTATCTTG 288432
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
||| || ||||||||| |||||||| || || |||||| ||||| |||| ||||||
Sbjct 288431 AATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCACCTCAAGCGTAATCGTCTT 288372
Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | ||| || || || | |||||
Sbjct 288371 GCCCGTAAGAGTCTTGACAAAAATCTGCAT 288342
Score = 143 bits (158), Expect = 6e-29
Identities = 154/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
|||||| ||| ||| || || || ||||| ||| || || |||||||| || |||||
Sbjct 289001 GTGAAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTCCAGCTG 288942
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|||||| || ||||| || || || ||||| || || || || || || || ||||| ||
Sbjct 288941 CTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGAATCTT 288882
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||||||||| ||||||||||||||| || || || || |||| |||||||| ||
Sbjct 288881 GGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCGAGAGTAATGGTCTTTCCAGT 288822
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
||| || || ||||| | |||||
Sbjct 288821 CAAGGTCTTGACGAAAATCTGCAT 288798
Score = 140 bits (154), Expect = 7e-28
Identities = 157/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
|||||| || || || ||||| || || || |||||||| | || || | ||||| ||
Sbjct 288779 AACAAGATGTAGCGTCGACTCCTTCTGGATGTTGTAATCAGACAGGGTGCGGCCATCCTC 288720
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
||||||||| || ||||| || || || || ||||| ||||| || || || || |||||
Sbjct 288719 GAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGAGGGATACCCTCCTTATCTTG 288660
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
|| || ||||||||| || ||||| ||||| || ||||| || |||| |||||
Sbjct 288659 GATCTTAGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTCTT 288600
Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| || | ||| || ||||| | ||||||
Sbjct 288599 TCCAGTGAGAGTCTTGACGAAGATTTGCAT 288570
Score = 120 bits (132), Expect = 7e-22
Identities = 149/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||||||||| ||||| || ||||| ||||| |||| || || | || || || |||||
Sbjct 288317 GTGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGCTG 288258
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
|||||| ||||| || || || || ||||| ||||||||||| || ||||| || |||||
Sbjct 288257 CTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATTTT 288198
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||| || || || |||||||| || || || || | || | ||||| || ||
Sbjct 288197 CGACTTCACATTGTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTGCCAGT 288138
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
| || || ||||| | |||||
Sbjct 288137 GAGGGTCTTGACGAAGATCTGCAT 288114
>seq15
Length=1123021
Score = 143 bits (158), Expect = 6e-29
Identities = 163/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981
|||||||| || | |||||| |||||||| || || || ||||| || | ||| || |
Sbjct 653303 GAGTCTCAGGACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCG 653244
Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041
|| || ||||||||||| || |||||||| || || || ||||| || ||||| || ||
Sbjct 653243 GCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTC 653184
Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101
||||| || || || |||||| || || || ||||| || ||||| ||||||||
Sbjct 653183 CTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTCAAGGGT 653124
Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| ||||| || |||| || || ||||| | ||||||
Sbjct 653123 GATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 653085
>seq4
Length=1854919
Score = 116 bits (128), Expect = 8e-21
Identities = 133/179 (74%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012
|| || || ||||| |||| |||||| | ||||| ||||||||||| || || |||||
Sbjct 704161 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 704102
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
|| || || ||||| || ||||| || || |||||||| || || |||||| || ||
Sbjct 704101 AGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 704042
Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
|| || || || || || |||||||| | ||||| || ||||| || || |||||
Sbjct 704041 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 703983
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109480420135661
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |