Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016 -05-10] 83 sequences; 35,818,201 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq28 82.4 9e-11 >seq28 Length=369090 Score = 82.4 bits (90), Expect = 9e-11 Identities = 283/439 (64%), Gaps = 2/439 (0%) Strand=Plus/Plus Query 48125 CTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGA 48184 |||||| ||||| || || || | | || ||||| ||||| || || ||||| | | Sbjct 126974 CTCAAACTCATCGCCGTAGACGTCCGCCAATCCAGGGCATTCGTTGGGGCACATGAGAGT 127033 Query 48185 CCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAA 48244 ||| | | | || | || | |||| || | ||| || ||||| ||||| || Sbjct 127034 CCAGGCGCCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAA 127093 Query 48245 TAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCAT 48304 || || | | | | ||| || ||||| ||| || | | || || || || | Sbjct 127094 TAGGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCAAGTCCAGGAACTCAAA 127153 Query 48305 TATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCC 48364 | ||| ||||||||||| || | || || || | |||| ||||| || ||||| || Sbjct 127154 GACATCCGCATGCCATGGCTCAACGTAGATGGCGAAAGCACCGGGTCGCTTGTTACCACC 127213 Query 48365 TTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGA 48424 || || | || || || || ||||| | || | | ||| || || ||||| || || Sbjct 127214 CTGGTCAACGTACCTCGCGGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCGTTCGA 127273 Query 48425 TATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAAT-TGAAATAC 48483 | |||||||| || | ||| || ||| | || | ||| | || | ||| | Sbjct 127274 GTTTCCATTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGATGGATGTTTAAT-C 127332 Query 48484 CTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTT 48543 | ||||| || || | || || || | ||||| || || || ||||| || || | Sbjct 127333 CGATACCTCCAGCAGTCTTTGAGATCATGGCACATGTCTTGAGCGTGTCATAGATACCCT 127392 Query 48544 CTATACTATCATCTATCAT 48562 | |||||||| || |||| Sbjct 127393 CAATACTATCCTCCTTCAT 127411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562108216812120