Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016
-05-10] 83 sequences; 35,818,201 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq28 82.4 9e-11
>seq28
Length=369090
Score = 82.4 bits (90), Expect = 9e-11
Identities = 283/439 (64%), Gaps = 2/439 (0%)
Strand=Plus/Plus
Query 48125 CTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGA 48184
|||||| ||||| || || || | | || ||||| ||||| || || ||||| | |
Sbjct 126974 CTCAAACTCATCGCCGTAGACGTCCGCCAATCCAGGGCATTCGTTGGGGCACATGAGAGT 127033
Query 48185 CCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAA 48244
||| | | | || | || | |||| || | ||| || ||||| ||||| ||
Sbjct 127034 CCAGGCGCCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAA 127093
Query 48245 TAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCAT 48304
|| || | | | | ||| || ||||| ||| || | | || || || || |
Sbjct 127094 TAGGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCAAGTCCAGGAACTCAAA 127153
Query 48305 TATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCC 48364
| ||| ||||||||||| || | || || || | |||| ||||| || ||||| ||
Sbjct 127154 GACATCCGCATGCCATGGCTCAACGTAGATGGCGAAAGCACCGGGTCGCTTGTTACCACC 127213
Query 48365 TTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGA 48424
|| || | || || || || ||||| | || | | ||| || || ||||| || ||
Sbjct 127214 CTGGTCAACGTACCTCGCGGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCGTTCGA 127273
Query 48425 TATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAAT-TGAAATAC 48483
| |||||||| || | ||| || ||| | || | ||| | || | ||| |
Sbjct 127274 GTTTCCATTGGTACCGGCAATGTATGCACCAGTGGCACGGATACGATGGATGTTTAAT-C 127332
Query 48484 CTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTT 48543
| ||||| || || | || || || | ||||| || || || ||||| || || |
Sbjct 127333 CGATACCTCCAGCAGTCTTTGAGATCATGGCACATGTCTTGAGCGTGTCATAGATACCCT 127392
Query 48544 CTATACTATCATCTATCAT 48562
| |||||||| || ||||
Sbjct 127393 CAATACTATCCTCCTTCAT 127411
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562108216812120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |