Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016
-05-10] 83 sequences; 35,818,201 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq20 87.8 1e-11
>seq20
Length=799479
Score = 87.8 bits (96), Expect = 1e-11
Identities = 153/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
|||||||||||| || ||||| || || || || || || || || | || ||
Sbjct 288563 ACGAAGACGGAGAACCAGATGCAGGGTCGACTCCTTCTGAATGTTGTAGTCCGACAGGGT 288504
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| | ||| || || ||||| |||||||| || || || || || || ||||| || ||
Sbjct 288503 GCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGGATACC 288444
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729
|| || ||||||||||| ||||| ||||| ||||| | || | | ||||
Sbjct 288443 CTCTTTATCTTGAATCTTCGACTTGACGTTATCAATGGTATCGGATGATTCCA-CCTCAA 288385
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
| ||||| || || || || |||||||| || ||||| ||
Sbjct 288384 GCGTAATCGTCTTGCCCGTAAGAGTCTTGACAAAAATCTG 288345
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268175639727284
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |