Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016 -05-10] 83 sequences; 35,818,201 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq28 242 4e-59 seq3 140 4e-28 seq71 136 5e-27 seq25 84.2 3e-11 >seq28 Length=369090 Score = 242 bits (268), Expect = 4e-59 Identities = 1168/1820 (64%), Gaps = 63/1820 (3%) Strand=Plus/Minus Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGC-TATCTTCAACGGCTCGATGGCATCCTCAT 75204 ||||| || |||| || |||||| || | ||||||| || || ||||||| | Sbjct 127645 TACTTCGGCTTCAAGACTCTTGAGC-GATCGTATCTTCTCCGCCTTGATGGCAAGGTTGC 127587 Query 75205 GGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGA 75264 || | |||||| ||||| | ||||| || || | ||||| ||||| || || ||||| Sbjct 127586 TGAGAGACCACAGCACATGATTATGCGTGTTGCGGTGGGCATTCACGGCGAGGATATTGA 127527 Query 75265 TTCTGTCTTGGAGACATACGACAAGATGTC--CCAAGGTATGTTCATTCACGCAACACCA 75322 ||||||||| || ||||| |||| || |||| ||||| | ||| Sbjct 127526 GAAGACAACCGAGACATACAACCTCATGTCTTCCAAA-TAC-TTCACACACGCTTCCCCA 127469 Query 75323 ACCCTCTTCAATGCTGGTACACCA-AGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAA 75381 || ||||||||||||||||||||| || || ||| |||| |||||| | ||| || Sbjct 127468 ACACTCTTCAATGCTGGTACACCACAGGCC-CAGCTGTCATCCTGCTTCTTGGTCGACAT 127410 Query 75382 CAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAA 75441 |||||||| || | |||||||||| || || | | ||||| |||||||| Sbjct 127409 GAAGGAGGATAGTATTGAGGGTATCTATGACACGCTCAAGACATGTGCCATGATCTCAAA 127350 Query 75442 GTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCG 75501 | ||||| ||||| || | |||||||| | | | |||| | | ||| Sbjct 127349 GACTGCTGGAGGTATCGGATTAAACATCCATCGTATCCGTGCCACTGGTGCATACATTGC 127290 Query 75502 GGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGC 75561 || || ||||| | || | ||||| |||| ||||| ||||| || ||| ||| || Sbjct 127289 CGGTACCAATGGAAACTCGAACGGTATCGTTCCCATGCTCCGCGTCTTCAACAACACCGC 127230 Query 75562 GCGCTATGTAAATCAAGCGGGGCGTCGCAAG------GGGTCCATCGCGGTCTACTTGGA 75615 | | || || | || ||| || |||| || | |||| ||||| | || Sbjct 127229 GAGGTACGTTGACCA---GGGTGGTAACAAGCGACCCGGTGCTTTCGCCATCTACGTTGA 127173 Query 75616 ACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGA 75675 ||||||||||| ||| || | |||||||| || || || ||||| || | || || Sbjct 127172 GCCATGGCATGCGGATGTCTTTGAGTTCCTGGACTTGAGAAAGAACCACGGCAAGGAGGA 127113 Query 75676 GGCTCGGTG-TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGG 75734 | || ||| | || || || | | || ||||| || || || ||||||||||| | Sbjct 127112 AG-TCCGTGCCCGTGACCTATTCTACGCTCTCTGGATCCCGGATCTCTTCATGAAGCGTG 127054 Query 75735 TTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCCGAC 75793 ||||| || || ||| |||| | || || || || || || || | | ||| Sbjct 127053 TTGAGAAGAACGGCGCCTGGACTCTCATGTGCCCCAACGAATGC-CCTGGATTGGCGGAC 126995 Query 75794 GCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTA---GAGCC 75850 | || || |||||||| || |||||| || || ||||||||| | | Sbjct 126994 GTCTACGGCGATGAGTTTGAGGCGCTCTACGAGGGCTACGAGAAGGAGGGTAAGGGTCGC 126935 Query 75851 AATGCGACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGAC 75909 || ||| | | || | | || | ||||| | | || ||| | || ||||| ||||| Sbjct 126934 AA---GACCAT-CAAGGCCCAGAAGCTTTGGTACTCCATCCTCGAGTCTCAGACTGAGAC 126879 Query 75910 TGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTT 75969 |||| || | ||| | || ||||||||||| ||| ||||| ||||| ||||| | Sbjct 126878 AGGAAACCCTTTCATGTTGTATAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCT 126819 Query 75970 GGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGA 76029 || || ||| ||||| || || ||||| || || | |||||| | | |||||| Sbjct 126818 CGGTACCATCCGCAGCTCCAACCTGTGCACAGAGATCGTCGAGTACTCTGCCCCGGATGA 126759 Query 76030 GACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCG 76089 | ||| || || || |||||||| | ||||| || | ||| || | | | | Sbjct 126758 GGTGGCCGTGTGTAACTTGGCATCTCTTGCCCTGCCGACGTACGTTGACATGGCCAACGG 126699 Query 76090 CACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCG 76149 ||| | ||| | | || |||||||| ||||| || ||||| || || | ||| Sbjct 126698 CACATATGACTTCCAGAAGCTTCATGAGGTCACACAGGTTGTTGTTAAGAACTTGAACAA 126639 Query 76150 AGTCATTGACAGAAATTTTTATCCCGTTGAGACTGC---GCGAAAGTCTAATATGCGACA 76206 |||||||| || | || ||||| ||| || ||| | || | || || Sbjct 126638 GATCATTGACGTCAACTACTACCCCGTCGAGGAGGCCAGGCGCA---GCAACTTCCGTCA 126582 Query 76207 CAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTAT-TTTGTGCCGCTACG 76265 ||| || ||| | ||||| || ||||| || |||| ||| | | | | || | Sbjct 126581 CAGGCCAGTTGCCGTTGGTGTCCAGGGTCTTGCTGATGCATTCCTGGCTCTTCGCCTTC- 126523 Query 76266 CATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACG 76325 | || ||||| || |||||| | || | | |||||||| ||||| || |||| Sbjct 126522 CCTTCGATTCTCCCGAGGCCAAGTTCCTCAACTCCCAGATCTTTGAGACCATCTACCACG 126463 Query 76326 CATCCCTGGA--GGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGA 76383 | | | || | | || || |||| | || || | || ||||| | || Sbjct 126462 -GTGCTTTGACTGCCTCCGTG-GAGCTGGCCCAGATTCACGGCACGTACGAGACGTACGA 126405 Query 76384 GGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGC- 76442 ||| || || | |||| | || | ||| || | |||||||||| || | || | | Sbjct 126404 GGGATCGCCAGTGTCCAAGGGCGAGCTCCAATACGATATGTGGG-GCGTTACTCCTACCG 126346 Query 76443 TCAACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTC 76502 | | |||||||| |||||||| || |||||| || | ||| | || ||| || Sbjct 126345 ACCTGTGGGACTGGGACTCTCTCAAGGTTCGGATCAAGCAGCACGGTGTCCGCAACTCTC 126286 Query 76503 TTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCT 76562 | | | ||||| ||||| || || |||||| | || || | || || || |||| Sbjct 126285 TGCTCGTTGCACCCATGCCCACTGCTTCCACCTCCCAGATTCTCGGCTTCAACGAGTGCT 126226 Query 76563 TTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTG 76622 |||| |||||||| | ||||||||| | | | ||| || || ||||| | | Sbjct 126225 TTGAGCCATACACCTCCAACATCTACTCGCGCCGTGTCCTGGCCGGCGAGTTCCAAGTCG 126166 Query 76623 TCAACAAGCACCTCG----TCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATG 76678 | || | ||| | |||| ||||| | || || || ||||| | | ||| Sbjct 126165 TTAA----CCCCTGGTTGCTCAAGGACCTGGTCGACATGGGACTGTGGTCTGACAACATG 126110 Query 76679 AAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGAT 76738 ||| | | ||| | | || || ||||| || |||||| | | ||||| | || Sbjct 126109 AAGAACCGCATCATCGCGGACGGAGGCTCCATCCAGAATATCCCCAACATCCCCGCCGAC 126050 Query 76739 ATCAAGAATCTCTACCGCACAGTGTGGGAAAT---CAAGATGAAAGATGTCATTGACATG 76795 |||||| |||||| || || ||||| || | || | | | || | | ||| Sbjct 126049 ATCAAGGCCCTCTACAAGACCGTCTGGGAGATCTCCCAG-CGCACCA--TCGTCCAGATG 125993 Query 76796 GCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAA 76853 || || || ||||| |||||| |||| |||| ||| | || | |||| | Sbjct 125992 GCGGCTGACCGTGGAGCCTTCATCGATC--AGTCCCAGTCCCTCAACATCCACATGAAGG 125935 Query 76854 GTCCAACGATGTCCAAGCTCTCTTCTATGCA-TATGTACGCGTGGAAACAGGGGCTCAAA 76912 ||||| ||| |||| || | || ||||| | || || ||||| | || ||||| Sbjct 125934 ACCCAACAATGGGCAAGATCACATCCATGCACTTTGCTGGC-TGGAAGCTCGGCCTCAAG 125876 Query 76913 ACCGGAATGTACTATCTCCG 76932 ||||| |||||||| ||||| Sbjct 125875 ACCGGCATGTACTACCTCCG 125856 >seq3 Length=1861714 Score = 140 bits (154), Expect = 4e-28 Identities = 342/510 (67%), Gaps = 9/510 (2%) Strand=Plus/Plus Query 64714 TGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTGACGACTGGAAGACCC---TGAAT 64770 ||||| || || || ||||| | ||||| || ||| |||||||||| | || | ||| Sbjct 164701 TGGACGGCAGAGGAGATTGATCTCTCCAAGGACCTTCACGACTGGAACAACCGCCTCAAT 164760 Query 64771 GAAAATGAAAAGAAATTCATAAAGTACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 64830 || |||| | ||||| || | || || ||||| || | ||| || |||||| Sbjct 164761 GACGATGAGCGTTACTTCATTTCCCACGTTCTCGCTTTCTTCGCCGCGTCAGACGGAATT 164820 Query 64831 GTTTTTGAGAATATCAATAA-CAATTTTGCGGATGAAGTGCAGATAAGCGAAGCGCGCTC 64889 || |||||| || | | || || | || || || || ||||| |||| Sbjct 164821 GTCAACGAGAATCTCCTCGAGCGCTTCAGCAGC-GAGGTCCAAATCCCAGAAGCCCGCTG 164879 Query 64890 ATTCTACGCATATCAATGCCATAAT-GAAATGGTTCATGGCGAAACATATTCAAAATTGA 64948 ||||||| | ||| | || || || | |||| | ||| ||||| || | | Sbjct 164880 CTTCTACGGTTTCCAAATC-ATGATAGAGAACATTCACGCCGAGACATACTCCCTCCTCA 164938 Query 64949 TTGACAAATACATTAAGGATGGATCTGAAAAGAAGCAGTTATTTGAAGCCATCCAAACTG 65008 | |||| |||||| ||||| | || || | | | || | |||||| | || Sbjct 164939 TCGACACATACATCAAGGAACAAGCTCAACGCACATACCTCTTCAATGCCATCGAGACCA 164998 Query 65009 TACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCGC 65067 | || || ||| |||||||||| | |||||| | | ||| | | |||| | || | Sbjct 164999 TTCCTTGCATTAAGAAGAAGGCCGACTGGGCAGTTAGGTGGATCCAAGACAAGGATTC-C 165057 Query 65068 TCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCA 65127 ||||||| ||||||| |||| || || || |||||||||||||||||||| || Sbjct 165058 ACCTTCGCTCAGCGCCTCGTTGCCTTCGCCGCCGTTGAGGGTATCTTCTTCTCCGGCTCC 165117 Query 65128 TTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAAT 65187 ||| | | |||| ||| | |||||||| || |||||| | ||||| |||||| || Sbjct 165118 TTCGCCTCCATTTTCTGGCTCAAGAAGCGTGGCCTCATGGCCGGCCTGACCTTCTCGAAC 165177 Query 65188 GAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 || || || ||||| || |||||||||||| Sbjct 165178 GAGCTCATCTCCCGTGACGAGGGTCTCCAC 165207 Score = 140 bits (154), Expect = 4e-28 Identities = 342/510 (67%), Gaps = 9/510 (2%) Strand=Plus/Plus Query 64714 TGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTGACGACTGGAAGACCC---TGAAT 64770 ||||| || || || ||||| | ||||| || ||| |||||||||| | || | ||| Sbjct 174557 TGGACGGCAGAGGAGATTGATCTCTCCAAGGACCTTCACGACTGGAACAACCGCCTCAAT 174616 Query 64771 GAAAATGAAAAGAAATTCATAAAGTACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 64830 || |||| | ||||| || | || || ||||| || | ||| || |||||| Sbjct 174617 GACGATGAGCGTTACTTCATTTCCCACGTTCTCGCTTTCTTCGCCGCGTCAGACGGAATT 174676 Query 64831 GTTTTTGAGAATATCAATAA-CAATTTTGCGGATGAAGTGCAGATAAGCGAAGCGCGCTC 64889 || |||||| || | | || || | || || || || ||||| |||| Sbjct 174677 GTCAACGAGAATCTCCTCGAGCGCTTCAGCAGC-GAGGTCCAAATCCCAGAAGCCCGCTG 174735 Query 64890 ATTCTACGCATATCAATGCCATAAT-GAAATGGTTCATGGCGAAACATATTCAAAATTGA 64948 ||||||| | ||| | || || || | |||| | ||| ||||| || | | Sbjct 174736 CTTCTACGGTTTCCAAATC-ATGATAGAGAACATTCACGCCGAGACATACTCCCTCCTCA 174794 Query 64949 TTGACAAATACATTAAGGATGGATCTGAAAAGAAGCAGTTATTTGAAGCCATCCAAACTG 65008 | |||| |||||| ||||| | || || | | | || | |||||| | || Sbjct 174795 TCGACACATACATCAAGGAACAAGCTCAACGCACATACCTCTTCAATGCCATCGAGACCA 174854 Query 65009 TACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCGC 65067 | || || ||| |||||||||| | |||||| | | ||| | | |||| | || | Sbjct 174855 TTCCTTGCATTAAGAAGAAGGCCGACTGGGCAGTTAGGTGGATCCAAGACAAGGATTC-C 174913 Query 65068 TCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCA 65127 ||||||| ||||||| |||| || || || |||||||||||||||||||| || Sbjct 174914 ACCTTCGCTCAGCGCCTCGTTGCCTTCGCCGCCGTTGAGGGTATCTTCTTCTCCGGCTCC 174973 Query 65128 TTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAAT 65187 ||| | | |||| ||| | |||||||| || |||||| | ||||| |||||| || Sbjct 174974 TTCGCCTCCATTTTCTGGCTCAAGAAGCGTGGCCTCATGGCCGGCCTGACCTTCTCGAAC 175033 Query 65188 GAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 || || || ||||| || |||||||||||| Sbjct 175034 GAGCTCATCTCCCGTGACGAGGGTCTCCAC 175063 >seq71 Length=14946 Score = 136 bits (150), Expect = 5e-27 Identities = 342/510 (67%), Gaps = 10/510 (2%) Strand=Plus/Minus Query 64714 TGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTGACGACTGGAAGACCC---TGAAT 64770 ||||| || || || ||||| | ||||| || ||| |||||||||| | || | ||| Sbjct 13028 TGGACGGCAGAGGAGATTGATCTCTCCAAGGACCTTCACGACTGGAACAACCGCCTCAAT 12969 Query 64771 GAAAATGAAAAGAAATTCATAAAGTACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 64830 || |||| | ||||| || | || || ||||| || | ||| || |||||| Sbjct 12968 GACGATGAGCGTTACTTCATTTCCCACGTTCTCGCTTTCTTCGCCGCGTCAGACGGAATT 12909 Query 64831 GTTTTTGAGAATATCAATAA-CAATTTTGCGGATGAAGTGCAGATAAGCGAAGCGCGCTC 64889 || |||||| || | | || || | || || || || ||||| |||| Sbjct 12908 GTCAACGAGAATCTCCTCGAGCGCTTCAGCAGC-GAGGTCCAAATCCCAGAAGCCCGCTG 12850 Query 64890 ATTCTACGCATATCAATGCCATAAT-GAAATGGTTCATGGCGAAACATATTCAAAATTGA 64948 ||||||| | ||| | || || || | |||| | ||| ||||| || | | Sbjct 12849 CTTCTACGGTTTCCAAATC-ATGATAGAGAACATTCACGCCGAGACATACTCCCTCCTCA 12791 Query 64949 TTGACAAATACATTAAGGATGGATCTGAAAAGAAGCAGTTATTTGAAGCCATCCAAACTG 65008 | |||| |||||| ||||| | || || | | | || | |||||| | || Sbjct 12790 TCGACACATACATCAAGGAACAAGCTCAACGCACATACCTCTTCAATGCCATCGAGACCA 12731 Query 65009 TACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCGC 65067 | || || ||| |||||||||| | |||||| | | ||| | | |||| | || | Sbjct 12730 TTCCTTGCATTAAGAAGAAGGCCGACTGGGCAGTTAGGTGGATCCAAGACAAGGATTC-C 12672 Query 65068 TCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCA 65127 ||||||| ||||||| |||| || || || |||||||||||||||||||| || Sbjct 12671 ACCTTCGCTCAGCGCCTCGTTGCCTTCGCCCC-GTTGAGGGTATCTTCTTCTCCGGCTCC 12613 Query 65128 TTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAAT 65187 ||| | | |||| ||| | |||||||| || |||||| | ||||| |||||| || Sbjct 12612 TTCGCCTCCATTTTCTGGCTCAAGAAGCGTGGCCTCATGGCCGGCCTGACCTTCTCGAAC 12553 Query 65188 GAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 || || || ||||| || |||||||||||| Sbjct 12552 GAGCTCATCTCCCGTGACGAGGGTCTCCAC 12523 >seq25 Length=557695 Score = 84.2 bits (92), Expect = 3e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128 |||| || |||| || |||| || || || |||||||||||||||||||| || | Sbjct 29718 CCTTTGCTCAGCGTCTCGTTGCCTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCTCCT 29659 Query 65129 TCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATG 65188 || | |||||| ||| | || ||||| || |||||| | || || |||||| || | Sbjct 29658 TCGCCTCTATTTTCTGGCTCAACAAGCGTGGCCTCATGGCTGGTCTGACCTTCTCGAACG 29599 Query 65189 AACTTATTTCCCGAGATGAGGGTCTCCAC 65217 | || || |||| | ||||| |||||| Sbjct 29598 AGCTCATATCCCATAACGAGGGCCTCCAC 29570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568981059040