Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016 -05-10] 83 sequences; 35,818,201 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq25 111 5e-19 seq7 105 2e-17 seq6 93.3 1e-13 >seq25 Length=557695 Score = 111 bits (122), Expect = 5e-19 Identities = 252/370 (68%), Gaps = 7/370 (2%) Strand=Plus/Minus Query 133292 GAAGTTCAACTGGCCGAAGCCCG-TGCCTTTTATGGGCTACAGATTGCGATGGAAAATAT 133350 ||||| ||| | | |||||||| || ||| || || | || || ||| || || || Sbjct 29924 GAAGTCCAAATCCCAGAAGCCCGCTGTCTTCTACGGTTTCCAAATCATGATCGAGAACAT 29865 Query 133351 CCATTCTATCACATATTCTACTC-TAATTGATACTTACATCAAAGATACCGTCCAGAAGC 133409 || | ||||| | | ||| | || || || |||||||| || | || | || Sbjct 29864 TCACGCCGAGACATACT-TCCTCCTCATCGACACATACATCAAGGAGTAAGCTCA-ACGC 29807 Query 133410 ACAAAC-TATTCAACGCCATTAGCGAAT-TTCCTTGTATTAAAAAGAAATCTGACTGGGC 133467 ||| || | ||||| |||||| | || ||||||| || || ||||| | |||||||| Sbjct 29806 ACATACCTCTTCAATGCCATT-GAGACCATTCCTTGCATCAAGAAGAAGGCCGACTGGGC 29748 Query 133468 TATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGT 133527 ||| ||||| || |||||| | | | |||||| ||||||||||| || |||| Sbjct 29747 AGTTAGGTGGATACAAGACAAGGATTCTACCTTTGCTCAGCGTCTCGTTGCCTTCGCTGC 29688 Query 133528 AGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGG 133587 || ||||| || || ||| || | ||| ||||||||| ||||| || |||||||| Sbjct 29687 CGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCTATTTTCTGGCTCAACAAGCGTGG 29628 Query 133588 TATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACAC 133647 | | |||| ||| || || ||||| || || || |||||| || ||||| Sbjct 29627 CCTCATGGCTGGTCTGACCTTCTCGAACGAGCTCATATCCCATAACGAGGGCCTCCACAC 29568 Query 133648 CGAATTTGCC 133657 || || ||| Sbjct 29567 TGACTTCGCC 29558 >seq7 Length=1683714 Score = 105 bits (116), Expect = 2e-17 Identities = 340/515 (66%), Gaps = 22/515 (4%) Strand=Plus/Minus Query 251484 TGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCG 251543 ||| ||||| |||||||| |||||||| ||||| || |||||||| | |||||||| | Sbjct 1470487 TGCGCCGTGGGAAATCATGCAATCACGTTCCATCTCTCCGAAACGCAATCCACCATCTCT 1470428 Query 251544 AGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATG 251603 || | |||||| ||||||| | || ||| | | || || ||| | | || Sbjct 1470427 GGCACGACCCTCCACAGGCTGCCTCGTCAGAATTTGAGTTGGTCCTCTGGCTCTGGCGTG 1470368 Query 251604 TTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA--TG 251661 ||| || | ||||||||| | || ||||||||| | | ||| || | ||||| || Sbjct 1470367 GATCTTGTCGTCGACCATATGCCTCAGGCGCTGGTAGTACGTGGGTCCCAAGAAGACCTG 1470308 Query 251662 CTCGA-AGGCATTTGCTCTCCAGTTAGAGCGTTATACATAACTTCGTTTCCATTAGATTC 251720 | | | | || |||| ||| || | ||| ||||| |||||| || ||| | Sbjct 1470307 CGCAACAAGC--TTGCG-TCCTGTGTGCCCGTGGTACATGACTTCGAAGCCGCGAGACTG 1470251 Query 251721 ATAACCAAGTTTCTGTAGCTCTGAAGCAA---TATCACCAATCTTGAATTTGCTAAAACT 251777 ||||| | | | || || | || | || || | || | | | || Sbjct 1470250 GTAACCCATGTCACGAAGACGCGACGAAACGCTGTCGACAGT---GACATCGGTGAAGGG 1470194 Query 251778 GGTGCCGTCTCCGTAAAGACCCATTTG--AATCAACACTTTGCCTAAAAGTGTCTCTTTC 251835 |||| |||| || | || || | | |||| ||| | | || | ||| || Sbjct 1470193 GGTGGCGTCGCCCTCCTTTCCGATGAGCGAGGCAAC-CTTCGAC-AACTGACACTCAATC 1470136 Query 251836 AGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTC 251895 | || || || ||||||||| ||||| || ||||| |||||||||| ||| || Sbjct 1470135 AAATGAGCAATCGTCATACGAGATGGAATGGCGTGGGGGTTGATGATGAGGTCAGGCACA 1470076 Query 251896 AGTCCATCAGCAGTGAAGGGCATATCCTTTTCCT--CAATAA-TGTTTCCAATAGTTCCC 251952 | || || |||||| |||||||||| ||| | ||| || | ||||| |||||| Sbjct 1470075 ACACCCTCGCGAGTGAAAGGCATATCCT---CCTGGCGGTAAGTGATACCAATTGTTCCC 1470019 Query 251953 TTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 || |||||||||||||| ||||||||||||||| Sbjct 1470018 TTCTGTCCGTGACGAGAGGCGAACTTATCACCAAT 1469984 >seq6 Length=1702635 Score = 93.3 bits (102), Expect = 1e-13 Identities = 105/140 (75%), Gaps = 3/140 (2%) Strand=Plus/Minus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | | ||| || |||||| |||| ||||| |||||||| ||||||||| Sbjct 92974 AGAATTTCCTTCAGACGCGGCACACCAAGGGTGACGTT---CTTGGACGACACACCAGCA 92918 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 || |||||||| || || || | || || | |||||||||||| || || |||| Sbjct 92917 AAATGGAAAGTGTTGAGCGTCATCTGTGTGGCAGGCTCACCAATAGACTGGGCGGCAAGA 92858 Query 301933 ATACCAACCATTTCTCCTGG 301952 ||||| ||||| || || || Sbjct 92857 ATACCGACCATCTCGCCGGG 92838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816034813971