Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016
-05-10] 83 sequences; 35,818,201 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq25 111 5e-19
seq7 105 2e-17
seq6 93.3 1e-13
>seq25
Length=557695
Score = 111 bits (122), Expect = 5e-19
Identities = 252/370 (68%), Gaps = 7/370 (2%)
Strand=Plus/Minus
Query 133292 GAAGTTCAACTGGCCGAAGCCCG-TGCCTTTTATGGGCTACAGATTGCGATGGAAAATAT 133350
||||| ||| | | |||||||| || ||| || || | || || ||| || || ||
Sbjct 29924 GAAGTCCAAATCCCAGAAGCCCGCTGTCTTCTACGGTTTCCAAATCATGATCGAGAACAT 29865
Query 133351 CCATTCTATCACATATTCTACTC-TAATTGATACTTACATCAAAGATACCGTCCAGAAGC 133409
|| | ||||| | | ||| | || || || |||||||| || | || | ||
Sbjct 29864 TCACGCCGAGACATACT-TCCTCCTCATCGACACATACATCAAGGAGTAAGCTCA-ACGC 29807
Query 133410 ACAAAC-TATTCAACGCCATTAGCGAAT-TTCCTTGTATTAAAAAGAAATCTGACTGGGC 133467
||| || | ||||| |||||| | || ||||||| || || ||||| | ||||||||
Sbjct 29806 ACATACCTCTTCAATGCCATT-GAGACCATTCCTTGCATCAAGAAGAAGGCCGACTGGGC 29748
Query 133468 TATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGT 133527
||| ||||| || |||||| | | | |||||| ||||||||||| || ||||
Sbjct 29747 AGTTAGGTGGATACAAGACAAGGATTCTACCTTTGCTCAGCGTCTCGTTGCCTTCGCTGC 29688
Query 133528 AGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGG 133587
|| ||||| || || ||| || | ||| ||||||||| ||||| || ||||||||
Sbjct 29687 CGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCTATTTTCTGGCTCAACAAGCGTGG 29628
Query 133588 TATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACAC 133647
| | |||| ||| || || ||||| || || || |||||| || |||||
Sbjct 29627 CCTCATGGCTGGTCTGACCTTCTCGAACGAGCTCATATCCCATAACGAGGGCCTCCACAC 29568
Query 133648 CGAATTTGCC 133657
|| || |||
Sbjct 29567 TGACTTCGCC 29558
>seq7
Length=1683714
Score = 105 bits (116), Expect = 2e-17
Identities = 340/515 (66%), Gaps = 22/515 (4%)
Strand=Plus/Minus
Query 251484 TGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCG 251543
||| ||||| |||||||| |||||||| ||||| || |||||||| | |||||||| |
Sbjct 1470487 TGCGCCGTGGGAAATCATGCAATCACGTTCCATCTCTCCGAAACGCAATCCACCATCTCT 1470428
Query 251544 AGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATG 251603
|| | |||||| ||||||| | || ||| | | || || ||| | | ||
Sbjct 1470427 GGCACGACCCTCCACAGGCTGCCTCGTCAGAATTTGAGTTGGTCCTCTGGCTCTGGCGTG 1470368
Query 251604 TTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA--TG 251661
||| || | ||||||||| | || ||||||||| | | ||| || | ||||| ||
Sbjct 1470367 GATCTTGTCGTCGACCATATGCCTCAGGCGCTGGTAGTACGTGGGTCCCAAGAAGACCTG 1470308
Query 251662 CTCGA-AGGCATTTGCTCTCCAGTTAGAGCGTTATACATAACTTCGTTTCCATTAGATTC 251720
| | | | || |||| ||| || | ||| ||||| |||||| || ||| |
Sbjct 1470307 CGCAACAAGC--TTGCG-TCCTGTGTGCCCGTGGTACATGACTTCGAAGCCGCGAGACTG 1470251
Query 251721 ATAACCAAGTTTCTGTAGCTCTGAAGCAA---TATCACCAATCTTGAATTTGCTAAAACT 251777
||||| | | | || || | || | || || | || | | | ||
Sbjct 1470250 GTAACCCATGTCACGAAGACGCGACGAAACGCTGTCGACAGT---GACATCGGTGAAGGG 1470194
Query 251778 GGTGCCGTCTCCGTAAAGACCCATTTG--AATCAACACTTTGCCTAAAAGTGTCTCTTTC 251835
|||| |||| || | || || | | |||| ||| | | || | ||| ||
Sbjct 1470193 GGTGGCGTCGCCCTCCTTTCCGATGAGCGAGGCAAC-CTTCGAC-AACTGACACTCAATC 1470136
Query 251836 AGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTC 251895
| || || || ||||||||| ||||| || ||||| |||||||||| ||| ||
Sbjct 1470135 AAATGAGCAATCGTCATACGAGATGGAATGGCGTGGGGGTTGATGATGAGGTCAGGCACA 1470076
Query 251896 AGTCCATCAGCAGTGAAGGGCATATCCTTTTCCT--CAATAA-TGTTTCCAATAGTTCCC 251952
| || || |||||| |||||||||| ||| | ||| || | ||||| ||||||
Sbjct 1470075 ACACCCTCGCGAGTGAAAGGCATATCCT---CCTGGCGGTAAGTGATACCAATTGTTCCC 1470019
Query 251953 TTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987
|| |||||||||||||| |||||||||||||||
Sbjct 1470018 TTCTGTCCGTGACGAGAGGCGAACTTATCACCAAT 1469984
>seq6
Length=1702635
Score = 93.3 bits (102), Expect = 1e-13
Identities = 105/140 (75%), Gaps = 3/140 (2%)
Strand=Plus/Minus
Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872
|||||||| | | ||| || |||||| |||| ||||| |||||||| |||||||||
Sbjct 92974 AGAATTTCCTTCAGACGCGGCACACCAAGGGTGACGTT---CTTGGACGACACACCAGCA 92918
Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932
|| |||||||| || || || | || || | |||||||||||| || || ||||
Sbjct 92917 AAATGGAAAGTGTTGAGCGTCATCTGTGTGGCAGGCTCACCAATAGACTGGGCGGCAAGA 92858
Query 301933 ATACCAACCATTTCTCCTGG 301952
||||| ||||| || || ||
Sbjct 92857 ATACCGACCATCTCGCCGGG 92838
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471816034813971
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |