Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016
-05-10] 83 sequences; 35,818,201 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq20 116 3e-21
seq28 114 1e-20
>seq20
Length=799479
Score = 116 bits (128), Expect = 3e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| | || || || || || || || |||||||| || || ||| | ||
Sbjct 288342 ATGCAGATTTTTGTCAAGACTCTTACGGGCAAGACGATTACGCTTGAGGTGGAATCATCC 288401
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || ||||| ||||| ||||| || || ||||| || ||
Sbjct 288402 GATACCATTGATAACGTCAAGTCGAAGATTCAAGATAAAGAGGGTATCCCTCCGGACCAG 288461
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || |||||||||| || || |||||||||||| | | | |||| || || |||
Sbjct 288462 CAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACCCTGTCGGACTACAAC 288521
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
||||| ||||| ||||| || || ||||
Sbjct 288522 ATTCAGAAGGAGTCGACCCTGCATCTGGT 288550
Score = 96.9 bits (106), Expect = 3e-15
Identities = 147/208 (71%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| ||||| | || || || || || || || |||||||| ||||| || | |
Sbjct 288570 ATGCAAATCTTCGTCAAGACTCTCACTGGAAAGACAATTACGCTGGAAGTCGAGTCGTCG 288629
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || ||||||||||| || || || || ||||| || ||
Sbjct 288630 GATACCATCGATAACGTCAAGTCTAAGATCCAAGATAAGGAGGGTATCCCTCCGGACCAG 288689
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || |||| || || || || ||||| |||||| | | | |||| ||||| |||
Sbjct 288690 CAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCTGATTACAAC 288749
Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910
|| || ||||| ||||| ||||| ||||
Sbjct 288750 ATCCAGAAGGAGTCGACGCTACATCTTG 288777
Score = 87.8 bits (96), Expect = 2e-12
Identities = 105/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
|||||||||||||| || ||||| || || || || |||||| ||||||| ||||| ||
Sbjct 287970 AAGATCCAAGACAAGGAGGGAATTCCCCCGGACCAGCAACGTCTGATCTTCGCCGGCAAG 288029
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
|| || ||||| | | | | || || || ||||| || ||||| ||||| || |||
Sbjct 288030 CAACTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCAC 288089
Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930
|||| | || | ||||| ||
Sbjct 288090 CTGGTCCTTCGTCTTCGCGGTGG 288112
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || || || || || || || | || || || | ||
Sbjct 288114 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGAGTCGTCC 288173
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || || ||||| ||||| || || || ||||| || ||
Sbjct 288174 GACACCATCGACAATGTGAAGTCGAAAATCCAGGACAAGGAGGGCATTCCTCCGGACCAG 288233
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || |||| || || || || ||||| ||||| | | | | || || || |||
Sbjct 288234 CAGCGCCTGATTTTCGCTGGTAAGCAGCTTGAGGACGGCCGCACCCTCTCCGACTACAAC 288293
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
||||| ||||| ||||| || ||||||||
Sbjct 288294 ATTCAGAAGGAGTCGACTCTTCACTTGGT 288322
>seq28
Length=369090
Score = 114 bits (126), Expect = 1e-20
Identities = 244/361 (68%), Gaps = 4/361 (1%)
Strand=Plus/Plus
Query 138358 ATCTCCCACACGGTCTTGTATAGATCACGAATATGTCG-CGGTATTGTTGCA-ATATTTT 138415
|||||||| ||||||||||| || | || |||| ||| ||||| ||||| |
Sbjct 126018 ATCTCCCAGACGGTCTTGTAGAGGGCCTTGAT--GTCGGCGGGGATGTTGGGGATATTCT 126075
Query 138416 GAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAACT 138475
| ||| || | |||| |||||||| || |||||| || |||| || |
Sbjct 126076 GGATGGAGCCTCCGTCCGCGATGATGCGGTTCTTCATGTTGTCAGACCACAGTCCCATGT 126135
Query 138476 TGATCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGAC 138535
|| || ||| || | || | ||| | ||| || || || ||||||| || || |
Sbjct 126136 CGACCAGGTCCTTGAGCAACCAGGGGTTAACGACTTGGAACTCGCCGGCCAGGACACGGC 126195
Query 138536 GAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCG 138595
| ||| |||||| |||| | |||||||| | |||||| || |||||||| | |
Sbjct 126196 GCGAGTAGATGTTGGAGGTGTATGGCTCAAAGCACTCGTTGAAGCCGAGAATCTGGGAGG 126255
Query 138596 TGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTC 138655
||| || || |||||| || || | ||||| || || | |||||| ||||||| |
Sbjct 126256 TGGAAGCAGTGGGCATGGGTGCAACGAGCAGAGAGTTGCGGACACCGTGCTGCTTGATCC 126315
Query 138656 GTTCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACT 138715
| ||||||| || ||||||||||| ||| |||| | | |||||||||||| |
Sbjct 126316 GAACCTTGAGAGAGTCCCAGTCCCACAGGTCGGTAGGAGTAACGCCCCACATATCGTATT 126375
Query 138716 G 138716
|
Sbjct 126376 G 126376
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897133231240
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