Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016 -05-10] 83 sequences; 35,818,201 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq20 116 3e-21 seq28 114 1e-20 >seq20 Length=799479 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | || || || || || || || |||||||| || || ||| | || Sbjct 288342 ATGCAGATTTTTGTCAAGACTCTTACGGGCAAGACGATTACGCTTGAGGTGGAATCATCC 288401 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||| ||||| ||||| || || ||||| || || Sbjct 288402 GATACCATTGATAACGTCAAGTCGAAGATTCAAGATAAAGAGGGTATCCCTCCGGACCAG 288461 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||||| || || |||||||||||| | | | |||| || || ||| Sbjct 288462 CAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACCCTGTCGGACTACAAC 288521 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||| ||||| ||||| || || |||| Sbjct 288522 ATTCAGAAGGAGTCGACCCTGCATCTGGT 288550 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || || || || || |||||||| ||||| || | | Sbjct 288570 ATGCAAATCTTCGTCAAGACTCTCACTGGAAAGACAATTACGCTGGAAGTCGAGTCGTCG 288629 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||||||||| || || || || ||||| || || Sbjct 288630 GATACCATCGATAACGTCAAGTCTAAGATCCAAGATAAGGAGGGTATCCCTCCGGACCAG 288689 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||| || || || || ||||| |||||| | | | |||| ||||| ||| Sbjct 288690 CAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACCCTGTCTGATTACAAC 288749 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910 || || ||||| ||||| ||||| |||| Sbjct 288750 ATCCAGAAGGAGTCGACGCTACATCTTG 288777 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 |||||||||||||| || ||||| || || || || |||||| ||||||| ||||| || Sbjct 287970 AAGATCCAAGACAAGGAGGGAATTCCCCCGGACCAGCAACGTCTGATCTTCGCCGGCAAG 288029 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 || || ||||| | | | | || || || ||||| || ||||| ||||| || ||| Sbjct 288030 CAACTCGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTCCAC 288089 Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930 |||| | || | ||||| || Sbjct 288090 CTGGTCCTTCGTCTTCGCGGTGG 288112 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || | || || || | || Sbjct 288114 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGAGTCGTCC 288173 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || || ||||| ||||| || || || ||||| || || Sbjct 288174 GACACCATCGACAATGTGAAGTCGAAAATCCAGGACAAGGAGGGCATTCCTCCGGACCAG 288233 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||| || || || || ||||| ||||| | | | | || || || ||| Sbjct 288234 CAGCGCCTGATTTTCGCTGGTAAGCAGCTTGAGGACGGCCGCACCCTCTCCGACTACAAC 288293 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||| ||||| ||||| || |||||||| Sbjct 288294 ATTCAGAAGGAGTCGACTCTTCACTTGGT 288322 >seq28 Length=369090 Score = 114 bits (126), Expect = 1e-20 Identities = 244/361 (68%), Gaps = 4/361 (1%) Strand=Plus/Plus Query 138358 ATCTCCCACACGGTCTTGTATAGATCACGAATATGTCG-CGGTATTGTTGCA-ATATTTT 138415 |||||||| ||||||||||| || | || |||| ||| ||||| ||||| | Sbjct 126018 ATCTCCCAGACGGTCTTGTAGAGGGCCTTGAT--GTCGGCGGGGATGTTGGGGATATTCT 126075 Query 138416 GAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAACT 138475 | ||| || | |||| |||||||| || |||||| || |||| || | Sbjct 126076 GGATGGAGCCTCCGTCCGCGATGATGCGGTTCTTCATGTTGTCAGACCACAGTCCCATGT 126135 Query 138476 TGATCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGAC 138535 || || ||| || | || | ||| | ||| || || || ||||||| || || | Sbjct 126136 CGACCAGGTCCTTGAGCAACCAGGGGTTAACGACTTGGAACTCGCCGGCCAGGACACGGC 126195 Query 138536 GAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCG 138595 | ||| |||||| |||| | |||||||| | |||||| || |||||||| | | Sbjct 126196 GCGAGTAGATGTTGGAGGTGTATGGCTCAAAGCACTCGTTGAAGCCGAGAATCTGGGAGG 126255 Query 138596 TGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTC 138655 ||| || || |||||| || || | ||||| || || | |||||| ||||||| | Sbjct 126256 TGGAAGCAGTGGGCATGGGTGCAACGAGCAGAGAGTTGCGGACACCGTGCTGCTTGATCC 126315 Query 138656 GTTCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACT 138715 | ||||||| || ||||||||||| ||| |||| | | |||||||||||| | Sbjct 126316 GAACCTTGAGAGAGTCCCAGTCCCACAGGTCGGTAGGAGTAACGCCCCACATATCGTATT 126375 Query 138716 G 138716 | Sbjct 126376 G 126376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897133231240