Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016 -05-10] 83 sequences; 35,818,201 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq71 82.4 7e-11 seq3 82.4 7e-11 >seq71 Length=14946 Score = 82.4 bits (90), Expect = 7e-11 Identities = 128/182 (70%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771 |||||| || ||| | ||| || || |||| | || ||||| || ||||||||||| Sbjct 12887 GCTCGAGGAGATTCTCGTTGACAATTCCGTCTGACGCGGCGAAGAAAGCGAGAACGTGGG 12946 Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831 || ||| | || || | ||| || || ||||||||||| | || ||||||||| | Sbjct 12947 AAATGAAGTAACGCTCATCGTCATTGAGGCGGTTGTTCCAGTCGTGAAGGTCCTTGGAGA 13006 Query 110832 TGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCAAAGAT 110891 || ||||| || || ||||| | | | | |||||||||||| |||| |||| Sbjct 13007 GATCAATCTCCTCTGCCGTCCAGAAAGACGCTTCTGCCTTCTTGTACATCTGCC--AGAT 13064 Query 110892 CT 110893 || Sbjct 13065 CT 13066 >seq3 Length=1861714 Score = 82.4 bits (90), Expect = 7e-11 Identities = 128/182 (70%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771 |||||| || ||| | ||| || || |||| | || ||||| || ||||||||||| Sbjct 164842 GCTCGAGGAGATTCTCGTTGACAATTCCGTCTGACGCGGCGAAGAAAGCGAGAACGTGGG 164783 Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831 || ||| | || || | ||| || || ||||||||||| | || ||||||||| | Sbjct 164782 AAATGAAGTAACGCTCATCGTCATTGAGGCGGTTGTTCCAGTCGTGAAGGTCCTTGGAGA 164723 Query 110832 TGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCAAAGAT 110891 || ||||| || || ||||| | | | | |||||||||||| |||| |||| Sbjct 164722 GATCAATCTCCTCTGCCGTCCAGAAAGACGCTTCTGCCTTCTTGTACATCTGCC--AGAT 164665 Query 110892 CT 110893 || Sbjct 164664 CT 164663 Score = 82.4 bits (90), Expect = 7e-11 Identities = 128/182 (70%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771 |||||| || ||| | ||| || || |||| | || ||||| || ||||||||||| Sbjct 174698 GCTCGAGGAGATTCTCGTTGACAATTCCGTCTGACGCGGCGAAGAAAGCGAGAACGTGGG 174639 Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831 || ||| | || || | ||| || || ||||||||||| | || ||||||||| | Sbjct 174638 AAATGAAGTAACGCTCATCGTCATTGAGGCGGTTGTTCCAGTCGTGAAGGTCCTTGGAGA 174579 Query 110832 TGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCAAAGAT 110891 || ||||| || || ||||| | | | | |||||||||||| |||| |||| Sbjct 174578 GATCAATCTCCTCTGCCGTCCAGAAAGACGCTTCTGCCTTCTTGTACATCTGCC--AGAT 174521 Query 110892 CT 110893 || Sbjct 174520 CT 174519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445093938214560