Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016 -05-10] 83 sequences; 35,818,201 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq71 188 1e-41 seq3 187 4e-41 seq25 168 1e-35 seq28 120 4e-21 >seq71 Length=14946 Score = 188 bits (208), Expect = 1e-41 Identities = 352/506 (70%), Gaps = 11/506 (2%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| | |||||| || ||||| || || || || ||||| || |||||| | || | Sbjct 13065 GATCTGGCAGATGTAC-AAGAAGGCAGAAGCGTCTTTCTGGACGGCAGAGGAGATTGATC 13007 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATCA 1455891 || | ||| | ||||| ||| | | ||||| ||||| | ||||| Sbjct 13006 TCTCCAAGGACCTTCACGACTGGAACAACCGCCTCAATGACGATGAGCGTTACTTCATTT 12947 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 ||||| ||||| ||| |||||||| || || || || |||||| || || Sbjct 12946 CCCACGTTCTCGC-TTTCTTCGCCGCGTCAGACGGAATTGTCAACGAGAATCTCCTCGAG 12888 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 ||||| | | ||||||||| | ||||| || || | || ||||| ||||| ||| Sbjct 12887 CGCTTCAGCAGCGAGGTCCAAATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATCATG 12828 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 || || ||||| ||| | || || ||||| ||||| |||||||| ||| ||||||| | Sbjct 12827 ATAGAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAACAA 12768 Query 1456072 GTCGAGAAGGACC-ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGC 1456130 | | | | || ||||||| |||||||| || | || | | | ||| ||||| Sbjct 12767 GCTCA-ACGCACATACCTCTTCAATGCCATCGAGACCATTCCTTGCATTAAGAAGAAGGC 12709 Query 1456131 CGACTGGGCGATGAAGTGGATCAACAAGG-AGGGCCTCGACACTTTGCCGAGCGGCTCGT 1456189 ||||||||| | | ||||||| |||| | || || || ||| || |||| ||||| Sbjct 12708 CGACTGGGCAGTTAGGTGGATC--CAAGACAAGGATTCCAC-CTTCGCTCAGCGCCTCGT 12652 Query 1456190 CGGCTTTGCCGCGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTC 1456249 | ||| ||| ||| ||||| ||||| ||||| ||| ||| | |||| || |||||| Sbjct 12651 TGCCTTCGCCCCGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATTTTCTGGCTC 12592 Query 1456250 AAGAAGCGCGGCCTCATGCCCGGTCT 1456275 |||||||| ||||||||| |||| || Sbjct 12591 AAGAAGCGTGGCCTCATGGCCGGCCT 12566 Score = 86.0 bits (94), Expect = 9e-11 Identities = 148/211 (70%), Gaps = 3/211 (1%) Strand=Plus/Minus Query 1456531 CGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCGCTCATCGG 1456590 |||||| ||| |||||| ||||||| | | ||| | || || ||||| |||| Sbjct 12448 CGAGGCTGTCTCCATCGAGCAAGAGTTCTTGACTGAGGCACTTCCCTGTGCGCTGCTCGG 12389 Query 1456591 CATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCTGCTCGCG 1456650 ||||||||||| | | ||| || |||||||| || ||||||||| | ||||| Sbjct 12388 CATGAACGCCAACT-TGATGAAGCAATACATTGAGTTC-GTCGCCGACAGGCTGCTACTC 12331 Query 1456651 GCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATGGAGTTGAT 1456710 | ||||| || ||||| ||||| | || ||||||| ||| | |||||| || Sbjct 12330 TCCCTCGGTAACG-AGAAGTACTACAAGGCGACCAACCCATTCGACTTCATGGAGAACAT 12272 Query 1456711 CTCGCTCGAGGGCAAGACCAACTTTTTCGAG 1456741 ||| || | || ||||||||||| || ||| Sbjct 12271 CTCCCTGGCAGGAAAGACCAACTTCTTTGAG 12241 >seq3 Length=1861714 Score = 187 bits (206), Expect = 4e-41 Identities = 353/507 (70%), Gaps = 12/507 (2%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| | |||||| || ||||| || || || || ||||| || |||||| | || | Sbjct 164664 GATCTGGCAGATGTAC-AAGAAGGCAGAAGCGTCTTTCTGGACGGCAGAGGAGATTGATC 164722 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATCA 1455891 || | ||| | ||||| ||| | | ||||| ||||| | ||||| Sbjct 164723 TCTCCAAGGACCTTCACGACTGGAACAACCGCCTCAATGACGATGAGCGTTACTTCATTT 164782 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 ||||| ||||| ||| |||||||| || || || || |||||| || || Sbjct 164783 CCCACGTTCTCGC-TTTCTTCGCCGCGTCAGACGGAATTGTCAACGAGAATCTCCTCGAG 164841 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 ||||| | | ||||||||| | ||||| || || | || ||||| ||||| ||| Sbjct 164842 CGCTTCAGCAGCGAGGTCCAAATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATCATG 164901 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 || || ||||| ||| | || || ||||| ||||| |||||||| ||| ||||||| | Sbjct 164902 ATAGAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAACAA 164961 Query 1456072 GTCGAGAAGGACC-ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGC 1456130 | | | | || ||||||| |||||||| || | || | | | ||| ||||| Sbjct 164962 GCTCA-ACGCACATACCTCTTCAATGCCATCGAGACCATTCCTTGCATTAAGAAGAAGGC 165020 Query 1456131 CGACTGGGCGATGAAGTGGATCAACAAGG-AGGGCCTCGACACTTTGCCGAGCGGCTCGT 1456189 ||||||||| | | ||||||| |||| | || || || ||| || |||| ||||| Sbjct 165021 CGACTGGGCAGTTAGGTGGATC--CAAGACAAGGATTCCAC-CTTCGCTCAGCGCCTCGT 165077 Query 1456190 CGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCT 1456248 | ||| ||||| || ||||| ||||| ||||| ||| ||| | |||| || ||||| Sbjct 165078 TGCCTTCGCCGCCGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATTTTCTGGCT 165137 Query 1456249 CAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 ||||||||| ||||||||| |||| || Sbjct 165138 CAAGAAGCGTGGCCTCATGGCCGGCCT 165164 Score = 187 bits (206), Expect = 4e-41 Identities = 353/507 (70%), Gaps = 12/507 (2%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| | |||||| || ||||| || || || || ||||| || |||||| | || | Sbjct 174520 GATCTGGCAGATGTAC-AAGAAGGCAGAAGCGTCTTTCTGGACGGCAGAGGAGATTGATC 174578 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATCA 1455891 || | ||| | ||||| ||| | | ||||| ||||| | ||||| Sbjct 174579 TCTCCAAGGACCTTCACGACTGGAACAACCGCCTCAATGACGATGAGCGTTACTTCATTT 174638 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 ||||| ||||| ||| |||||||| || || || || |||||| || || Sbjct 174639 CCCACGTTCTCGC-TTTCTTCGCCGCGTCAGACGGAATTGTCAACGAGAATCTCCTCGAG 174697 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 ||||| | | ||||||||| | ||||| || || | || ||||| ||||| ||| Sbjct 174698 CGCTTCAGCAGCGAGGTCCAAATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATCATG 174757 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 || || ||||| ||| | || || ||||| ||||| |||||||| ||| ||||||| | Sbjct 174758 ATAGAGAACATTCACGCCGAGACATACTCCCTCCTCATCGACACATACATCAAGGAACAA 174817 Query 1456072 GTCGAGAAGGACC-ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGC 1456130 | | | | || ||||||| |||||||| || | || | | | ||| ||||| Sbjct 174818 GCTCA-ACGCACATACCTCTTCAATGCCATCGAGACCATTCCTTGCATTAAGAAGAAGGC 174876 Query 1456131 CGACTGGGCGATGAAGTGGATCAACAAGG-AGGGCCTCGACACTTTGCCGAGCGGCTCGT 1456189 ||||||||| | | ||||||| |||| | || || || ||| || |||| ||||| Sbjct 174877 CGACTGGGCAGTTAGGTGGATC--CAAGACAAGGATTCCAC-CTTCGCTCAGCGCCTCGT 174933 Query 1456190 CGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCT 1456248 | ||| ||||| || ||||| ||||| ||||| ||| ||| | |||| || ||||| Sbjct 174934 TGCCTTCGCCGCCGTTGAGGGTATCTTCTTCTCCGGCTCCTTCGCCTCCATTTTCTGGCT 174993 Query 1456249 CAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 ||||||||| ||||||||| |||| || Sbjct 174994 CAAGAAGCGTGGCCTCATGGCCGGCCT 175020 Score = 86.0 bits (94), Expect = 9e-11 Identities = 148/211 (70%), Gaps = 3/211 (1%) Strand=Plus/Plus Query 1456531 CGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCGCTCATCGG 1456590 |||||| ||| |||||| ||||||| | | ||| | || || ||||| |||| Sbjct 165282 CGAGGCTGTCTCCATCGAGCAAGAGTTCTTGACTGAGGCACTTCCCTGTGCGCTGCTCGG 165341 Query 1456591 CATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCTGCTCGCG 1456650 ||||||||||| | | ||| || |||||||| || ||||||||| | ||||| Sbjct 165342 CATGAACGCCAACT-TGATGAAGCAATACATTGAGTTC-GTCGCCGACAGGCTGCTACTC 165399 Query 1456651 GCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATGGAGTTGAT 1456710 | ||||| || ||||| ||||| | || ||||||| ||| | |||||| || Sbjct 165400 TCCCTCGGTAACG-AGAAGTACTACAAGGCGACCAACCCATTCGACTTCATGGAGAACAT 165458 Query 1456711 CTCGCTCGAGGGCAAGACCAACTTTTTCGAG 1456741 ||| || | || ||||||||||| || ||| Sbjct 165459 CTCCCTGGCAGGAAAGACCAACTTCTTTGAG 165489 Score = 86.0 bits (94), Expect = 9e-11 Identities = 148/211 (70%), Gaps = 3/211 (1%) Strand=Plus/Plus Query 1456531 CGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCGCTCATCGG 1456590 |||||| ||| |||||| ||||||| | | ||| | || || ||||| |||| Sbjct 175138 CGAGGCTGTCTCCATCGAGCAAGAGTTCTTGACTGAGGCACTTCCCTGTGCGCTGCTCGG 175197 Query 1456591 CATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCTGCTCGCG 1456650 ||||||||||| | | ||| || |||||||| || ||||||||| | ||||| Sbjct 175198 CATGAACGCCAACT-TGATGAAGCAATACATTGAGTTC-GTCGCCGACAGGCTGCTACTC 175255 Query 1456651 GCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATGGAGTTGAT 1456710 | ||||| || ||||| ||||| | || ||||||| ||| | |||||| || Sbjct 175256 TCCCTCGGTAACG-AGAAGTACTACAAGGCGACCAACCCATTCGACTTCATGGAGAACAT 175314 Query 1456711 CTCGCTCGAGGGCAAGACCAACTTTTTCGAG 1456741 ||| || | || ||||||||||| || ||| Sbjct 175315 CTCCCTGGCAGGAAAGACCAACTTCTTTGAG 175345 >seq25 Length=557695 Score = 168 bits (186), Expect = 1e-35 Identities = 289/409 (71%), Gaps = 9/409 (2%) Strand=Plus/Minus Query 1455871 ACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATC 1455930 |||| |||||| | |||||| ||||| ||||| ||| |||||||| || || || Sbjct 30016 ACGATGAGCGCTACTTCATCTCCCACGTTCTCGC-TTTCTTCGCCGCGTCTGACGGAATT 29958 Query 1455931 GTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTT-T 1455989 || ||||||||| || ||||| | | || |||||| | ||||| || || | | Sbjct 29957 GTCAACGAGAACCTCCTCGAGCGCTTCAGCAGCGAAGTCCAAATCCCAGAAGCCCGCTGT 29898 Query 1455990 GTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGAT 1456049 || ||||| ||||| ||| ||||| ||||| ||| | || || |||| ||||| || Sbjct 29897 CTTCTACGGTTTCCAAATCATGATCGAGAACATTCACGCCGAGACATACTTCCTCCTCAT 29838 Query 1456050 CGACACCTACGTCAAGGACCCGGTCGAGAAGGACC-ACCTCTTTCGCGCCATCGACACGG 1456108 |||||| ||| ||||||| | | | | || ||||||| ||||| || || Sbjct 29837 CGACACATACATCAAGGAGTAAGCTCA-ACGCACATACCTCTTCAATGCCATTGAGACCA 29779 Query 1456109 TGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAG-GAGGGCCTC 1456167 | || | | | ||| |||||||||||||| | | |||||| ||||| | || || Sbjct 29778 TTCCTTGCATCAAGAAGAAGGCCGACTGGGCAGTTAGGTGGAT--ACAAGACAAGGATTC 29721 Query 1456168 GACACTTTGCCGAGCGGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCA 1456226 || |||||| |||| ||||| | ||| || | ||| ||||| ||||| ||||| ||| Sbjct 29720 TAC-CTTTGCTCAGCGTCTCGTTGCCTTCGCTGCCGTTGAGGGTATCTTCTTCTCCGGCT 29662 Query 1456227 GTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 ||| | | || || |||||||| ||||| ||||||||| | ||||| Sbjct 29661 CCTTCGCCTCTATTTTCTGGCTCAACAAGCGTGGCCTCATGGCTGGTCT 29613 >seq28 Length=369090 Score = 120 bits (132), Expect = 4e-21 Identities = 358/542 (66%), Gaps = 24/542 (4%) Strand=Plus/Minus Query 262879 TGGGACTGGGACGCACTGCGGGCGTCGGTTCGA-CAGCATGGCCTGCGCAACTCGTTGCT 262937 |||||||||||| | || || |||| || | ||||| || | |||||||| |||| Sbjct 126340 TGGGACTGGGACTCTCTCAAGGT-TCGGATCAAGCAGCACGGTGTCCGCAACTCTCTGCT 126282 Query 262938 CGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGGCGTTCGA 262997 ||| || | ||||||||| || | || || ||||| || ||| || |||| || || Sbjct 126281 CGTTGCACCCATGCCCACTGCTTCCACCTCCCAGATTCTCGGCTTCAACGAGTGCTTTGA 126222 Query 262998 GGTCAT-CACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACCGTGGTCA 263056 | ||| ||| |||||||||| ||||||| || || | ||||| || || || | Sbjct 126221 GC-CATACACCTCCAACATCTACTCGCGCCGTGTCCTGGCCGGCGAGTTCCAAGTCGTTA 126163 Query 263057 ACCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTGTGGACGCCCGACTTTCGCGACC 263116 ||| | || ||||| | |||| | || |||||| | | || | ||| Sbjct 126162 ACCCCTGGTTGCTCAAGGACCTGGTCGACATGGGACTGTGGTCTGACAACATGAAGAACC 126103 Query 263117 GGCTCATTGCGGCACAG-GGCTCGGTGCAGGGCTTTGACGACGAGGAGGTGCCGCCCGAT 263175 | |||| |||| || | ||||| | ||| | | || | || |||| Sbjct 126102 GCATCATCGCGG-ACGGAGGCTCCATCCAGAATATCCCCAACA------TCCCCGCCGAC 126050 Query 263176 CTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACCGGGTGACCATTG---ATATG 263232 ||||||| |||| ||||||||| |||||| | || | || ||||| | | ||| Sbjct 126049 ATCAAGGCCCTCTACAAGACCGTCTGGGAGATCTCCCAGCGC---ACCATCGTCCAGATG 125993 Query 263233 GCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCGCCGAC 263292 ||||| ||||| | ||| |||| ||| |||||| |||||| | || | ||| Sbjct 125992 GCGGCTGACCGTGGAGCCTTCATCGATCAGTCCCAGTCCCTCAACATCCACATGAAGGAC 125933 Query 263293 CCGAC---GGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGGCCTCAAG 263349 || || || | ||| |||| || |||||| || ||| | |||||||||| Sbjct 125932 CCAACAATGGGCAAGA---TCACATCCATGCACTTTGCTGGCTGGAAGCTCGGCCTCAAG 125876 Query 263350 ACTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCATTCAATTCACCGTCGAT 263409 || ||||||||||| || |||||| | |||| | | || |||||||||||||| Sbjct 125875 ACCGGCATGTACTACCTCCGCACCATGGCCGCCTCGGCTCCTATCCAATTCACCGTCGAC 125816 Query 263410 CA 263411 || Sbjct 125815 CA 125814 Score = 109 bits (120), Expect = 8e-18 Identities = 179/258 (69%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984 || || ||||| ||||| || || || | | ||| || || ||||| || | ||| Sbjct 127471 CCAACACTCTTCAATGCTGGTACACCACAGGCCCAGCTGTCATCCTGCTTCTTGGTCGAC 127412 Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044 ||||||| ||| || ||||| |||||||||||||||||| || || | ||||| Sbjct 127411 ATGAAGGAGGATAGTATTGAGGGTATCTATGACACGCTCAAGACATGTGCCATGATCTCA 127352 Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTG 260104 ||| | || || || ||||| || | || | || ||| | || || ||| | Sbjct 127351 AAGACTGCTGGAGGTATCGGATTAAACATCCATCGTATCCGTGCCACTGGTGCATACATT 127292 Query 260105 GCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACG 260164 || || ||||| || | || ||||| | || |||||||| ||||| || ||| |||| Sbjct 127291 GCCGGTACCAATGGAAACTCGAACGGTATCGTTCCCATGCTCCGCGTCTTCAACAACACC 127232 Query 260165 GCGCGCTACGTCGACCAG 260182 ||| | ||||| |||||| Sbjct 127231 GCGAGGTACGTTGACCAG 127214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177803194497446