Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016
-05-10] 83 sequences; 35,818,201 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq3 123 3e-23
seq71 116 5e-21
seq25 109 8e-19
>seq3
Length=1861714
Score = 123 bits (136), Expect = 3e-23
Identities = 367/563 (65%), Gaps = 16/563 (3%)
Strand=Plus/Minus
Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675
||||||||||||| || || ||||| || | || | ||||| || || || ||
Sbjct 165222 GCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGGTCAG 165163
Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735
|| | ||| || |||||||| |||||||| || |||| || || || || || |||||
Sbjct 165162 GCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGAAGAA 165103
Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATT---ATG 39792
||| || || || || || || ||||| || | || || | | | ||| || ||
Sbjct 165102 GATACCCTCAACGGCGGCGAAGGCAACGAGGCGCTGAGCGAAGGTGGAATCCTTGTCTTG 165043
Query 39793 TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 39852
|||||| | |||||| || || |||||||| | ||||| || || || || |||||
Sbjct 165042 GATCCACCTAACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGATGGCATT 164983
Query 39853 AAAGAGATAATGT-TTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACA 39911
||||| | |||| || | | || || | ||||| || || | || ||
Sbjct 164982 GAAGAGGT-ATGTGCGTTGAGCTTGTTCCTTGATGTATGTGTCGATGAGGAGGGAGTATG 164924
Query 39912 TTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAA 39971
| || | || ||||| || ||| || || || ||||| || || | ||||| | |
Sbjct 164923 TCTCGGCGTGAATGTTCTCTATCATGATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGA 164864
Query 39972 TTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGG 40031
|||| ||||| | || | || | ||| || || || ||||| || ||||
Sbjct 164863 TTTGGACCTCGCTGCTGAAGCGCTCGAGGAGATTCTCGTTGACAATTCCGTCTGACGCGG 164804
Query 40032 CAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT-------TTA 40084
| || || || | || || ||| || || ||||| |||| | ||
Sbjct 164803 CGAAGAAAGCGAGAACGTGGGAAATGAAGTAACGCTCATC----GTCATTGAGGCGGTTG 164748
Query 40085 TTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCT 40144
|||||||| | | || || || | ||| | || || || ||||| || ||||| |||
Sbjct 164747 TTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCCGTCCAGAAAGACGCTTCT 164688
Query 40145 GCCTTTTTGTACATGTTCCATAT 40167
||||| |||||||| | ||| ||
Sbjct 164687 GCCTTCTTGTACATCTGCCAGAT 164665
Score = 123 bits (136), Expect = 3e-23
Identities = 367/563 (65%), Gaps = 16/563 (3%)
Strand=Plus/Minus
Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675
||||||||||||| || || ||||| || | || | ||||| || || || ||
Sbjct 175078 GCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGGTCAG 175019
Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735
|| | ||| || |||||||| |||||||| || |||| || || || || || |||||
Sbjct 175018 GCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGAAGAA 174959
Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATT---ATG 39792
||| || || || || || || ||||| || | || || | | | ||| || ||
Sbjct 174958 GATACCCTCAACGGCGGCGAAGGCAACGAGGCGCTGAGCGAAGGTGGAATCCTTGTCTTG 174899
Query 39793 TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 39852
|||||| | |||||| || || |||||||| | ||||| || || || || |||||
Sbjct 174898 GATCCACCTAACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGATGGCATT 174839
Query 39853 AAAGAGATAATGT-TTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACA 39911
||||| | |||| || | | || || | ||||| || || | || ||
Sbjct 174838 GAAGAGGT-ATGTGCGTTGAGCTTGTTCCTTGATGTATGTGTCGATGAGGAGGGAGTATG 174780
Query 39912 TTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAA 39971
| || | || ||||| || ||| || || || ||||| || || | ||||| | |
Sbjct 174779 TCTCGGCGTGAATGTTCTCTATCATGATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGA 174720
Query 39972 TTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGG 40031
|||| ||||| | || | || | ||| || || || ||||| || ||||
Sbjct 174719 TTTGGACCTCGCTGCTGAAGCGCTCGAGGAGATTCTCGTTGACAATTCCGTCTGACGCGG 174660
Query 40032 CAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT-------TTA 40084
| || || || | || || ||| || || ||||| |||| | ||
Sbjct 174659 CGAAGAAAGCGAGAACGTGGGAAATGAAGTAACGCTCATC----GTCATTGAGGCGGTTG 174604
Query 40085 TTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCT 40144
|||||||| | | || || || | ||| | || || || ||||| || ||||| |||
Sbjct 174603 TTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCCGTCCAGAAAGACGCTTCT 174544
Query 40145 GCCTTTTTGTACATGTTCCATAT 40167
||||| |||||||| | ||| ||
Sbjct 174543 GCCTTCTTGTACATCTGCCAGAT 174521
>seq71
Length=14946
Score = 116 bits (128), Expect = 5e-21
Identities = 366/563 (65%), Gaps = 17/563 (3%)
Strand=Plus/Plus
Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675
||||||||||||| || || ||||| || | || | ||||| || || || ||
Sbjct 12508 GCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGGTCAG 12567
Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735
|| | ||| || |||||||| |||||||| || |||| || || || || || |||||
Sbjct 12568 GCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGAAGAA 12627
Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATT---ATG 39792
||| || || || | || || ||||| || | || || | | | ||| || ||
Sbjct 12628 GATACCCTCAAC-GGGGCGAAGGCAACGAGGCGCTGAGCGAAGGTGGAATCCTTGTCTTG 12686
Query 39793 TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 39852
|||||| | |||||| || || |||||||| | ||||| || || || || |||||
Sbjct 12687 GATCCACCTAACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGATGGCATT 12746
Query 39853 AAAGAGATAATGT-TTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACA 39911
||||| | |||| || | | || || | ||||| || || | || ||
Sbjct 12747 GAAGAGGT-ATGTGCGTTGAGCTTGTTCCTTGATGTATGTGTCGATGAGGAGGGAGTATG 12805
Query 39912 TTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAA 39971
| || | || ||||| || ||| || || || ||||| || || | ||||| | |
Sbjct 12806 TCTCGGCGTGAATGTTCTCTATCATGATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGA 12865
Query 39972 TTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGG 40031
|||| ||||| | || | || | ||| || || || ||||| || ||||
Sbjct 12866 TTTGGACCTCGCTGCTGAAGCGCTCGAGGAGATTCTCGTTGACAATTCCGTCTGACGCGG 12925
Query 40032 CAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT-------TTA 40084
| || || || | || || ||| || || ||||| |||| | ||
Sbjct 12926 CGAAGAAAGCGAGAACGTGGGAAATGAAGTAACGCTCATC----GTCATTGAGGCGGTTG 12981
Query 40085 TTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCT 40144
|||||||| | | || || || | ||| | || || || ||||| || ||||| |||
Sbjct 12982 TTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCCGTCCAGAAAGACGCTTCT 13041
Query 40145 GCCTTTTTGTACATGTTCCATAT 40167
||||| |||||||| | ||| ||
Sbjct 13042 GCCTTCTTGTACATCTGCCAGAT 13064
>seq25
Length=557695
Score = 109 bits (120), Expect = 8e-19
Identities = 176/250 (70%), Gaps = 5/250 (2%)
Strand=Plus/Plus
Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTA-ATTAATTCGTTAGAAAATGTGA 39674
||||||||||||| || |||||||| | | | | || | ||||| || || || |
Sbjct 29555 GCAGGCGAAGTCAGTGTGGAGGCCCTCGT-TATGGGATATGAGCTCGTTCGAGAAGGTCA 29613
Query 39675 GTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGA 39734
| |||| ||| || |||||||| |||||||| || || | || || || || || ||||
Sbjct 29614 GACCAGCCATGAGGCCACGCTTGTTGAGCCAGAAAATAGAGGCGAAGGAGCCGGAGAAGA 29673
Query 39735 AGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATT---AT 39791
|||| || || || || || || ||||| || | || | | | | ||| || |
Sbjct 29674 AGATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCAAAGGTAGAATCCTTGTCTT 29733
Query 39792 GTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCAT 39851
|||||||| | |||||| || || |||||||| | ||||| || || || || ||||
Sbjct 29734 GTATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCAATGGCAT 29793
Query 39852 TAAAGAGATA 39861
| ||||| ||
Sbjct 29794 TGAAGAGGTA 29803
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686908087332120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |