Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016 -05-10] 83 sequences; 35,818,201 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq3 123 3e-23 seq71 116 5e-21 seq25 109 8e-19 >seq3 Length=1861714 Score = 123 bits (136), Expect = 3e-23 Identities = 367/563 (65%), Gaps = 16/563 (3%) Strand=Plus/Minus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 ||||||||||||| || || ||||| || | || | ||||| || || || || Sbjct 165222 GCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGGTCAG 165163 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 || | ||| || |||||||| |||||||| || |||| || || || || || ||||| Sbjct 165162 GCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGAAGAA 165103 Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATT---ATG 39792 ||| || || || || || || ||||| || | || || | | | ||| || || Sbjct 165102 GATACCCTCAACGGCGGCGAAGGCAACGAGGCGCTGAGCGAAGGTGGAATCCTTGTCTTG 165043 Query 39793 TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 39852 |||||| | |||||| || || |||||||| | ||||| || || || || ||||| Sbjct 165042 GATCCACCTAACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGATGGCATT 164983 Query 39853 AAAGAGATAATGT-TTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACA 39911 ||||| | |||| || | | || || | ||||| || || | || || Sbjct 164982 GAAGAGGT-ATGTGCGTTGAGCTTGTTCCTTGATGTATGTGTCGATGAGGAGGGAGTATG 164924 Query 39912 TTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAA 39971 | || | || ||||| || ||| || || || ||||| || || | ||||| | | Sbjct 164923 TCTCGGCGTGAATGTTCTCTATCATGATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGA 164864 Query 39972 TTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGG 40031 |||| ||||| | || | || | ||| || || || ||||| || |||| Sbjct 164863 TTTGGACCTCGCTGCTGAAGCGCTCGAGGAGATTCTCGTTGACAATTCCGTCTGACGCGG 164804 Query 40032 CAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT-------TTA 40084 | || || || | || || ||| || || ||||| |||| | || Sbjct 164803 CGAAGAAAGCGAGAACGTGGGAAATGAAGTAACGCTCATC----GTCATTGAGGCGGTTG 164748 Query 40085 TTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCT 40144 |||||||| | | || || || | ||| | || || || ||||| || ||||| ||| Sbjct 164747 TTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCCGTCCAGAAAGACGCTTCT 164688 Query 40145 GCCTTTTTGTACATGTTCCATAT 40167 ||||| |||||||| | ||| || Sbjct 164687 GCCTTCTTGTACATCTGCCAGAT 164665 Score = 123 bits (136), Expect = 3e-23 Identities = 367/563 (65%), Gaps = 16/563 (3%) Strand=Plus/Minus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 ||||||||||||| || || ||||| || | || | ||||| || || || || Sbjct 175078 GCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGGTCAG 175019 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 || | ||| || |||||||| |||||||| || |||| || || || || || ||||| Sbjct 175018 GCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGAAGAA 174959 Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATT---ATG 39792 ||| || || || || || || ||||| || | || || | | | ||| || || Sbjct 174958 GATACCCTCAACGGCGGCGAAGGCAACGAGGCGCTGAGCGAAGGTGGAATCCTTGTCTTG 174899 Query 39793 TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 39852 |||||| | |||||| || || |||||||| | ||||| || || || || ||||| Sbjct 174898 GATCCACCTAACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGATGGCATT 174839 Query 39853 AAAGAGATAATGT-TTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACA 39911 ||||| | |||| || | | || || | ||||| || || | || || Sbjct 174838 GAAGAGGT-ATGTGCGTTGAGCTTGTTCCTTGATGTATGTGTCGATGAGGAGGGAGTATG 174780 Query 39912 TTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAA 39971 | || | || ||||| || ||| || || || ||||| || || | ||||| | | Sbjct 174779 TCTCGGCGTGAATGTTCTCTATCATGATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGA 174720 Query 39972 TTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGG 40031 |||| ||||| | || | || | ||| || || || ||||| || |||| Sbjct 174719 TTTGGACCTCGCTGCTGAAGCGCTCGAGGAGATTCTCGTTGACAATTCCGTCTGACGCGG 174660 Query 40032 CAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT-------TTA 40084 | || || || | || || ||| || || ||||| |||| | || Sbjct 174659 CGAAGAAAGCGAGAACGTGGGAAATGAAGTAACGCTCATC----GTCATTGAGGCGGTTG 174604 Query 40085 TTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCT 40144 |||||||| | | || || || | ||| | || || || ||||| || ||||| ||| Sbjct 174603 TTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCCGTCCAGAAAGACGCTTCT 174544 Query 40145 GCCTTTTTGTACATGTTCCATAT 40167 ||||| |||||||| | ||| || Sbjct 174543 GCCTTCTTGTACATCTGCCAGAT 174521 >seq71 Length=14946 Score = 116 bits (128), Expect = 5e-21 Identities = 366/563 (65%), Gaps = 17/563 (3%) Strand=Plus/Plus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 ||||||||||||| || || ||||| || | || | ||||| || || || || Sbjct 12508 GCAGGCGAAGTCAGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTCGAGAAGGTCAG 12567 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 || | ||| || |||||||| |||||||| || |||| || || || || || ||||| Sbjct 12568 GCCGGCCATGAGGCCACGCTTCTTGAGCCAGAAAATGGAGGCGAAGGAGCCGGAGAAGAA 12627 Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATT---ATG 39792 ||| || || || | || || ||||| || | || || | | | ||| || || Sbjct 12628 GATACCCTCAAC-GGGGCGAAGGCAACGAGGCGCTGAGCGAAGGTGGAATCCTTGTCTTG 12686 Query 39793 TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 39852 |||||| | |||||| || || |||||||| | ||||| || || || || ||||| Sbjct 12687 GATCCACCTAACTGCCCAGTCGGCCTTCTTCTTAATGCAAGGAATGGTCTCGATGGCATT 12746 Query 39853 AAAGAGATAATGT-TTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACA 39911 ||||| | |||| || | | || || | ||||| || || | || || Sbjct 12747 GAAGAGGT-ATGTGCGTTGAGCTTGTTCCTTGATGTATGTGTCGATGAGGAGGGAGTATG 12805 Query 39912 TTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAA 39971 | || | || ||||| || ||| || || || ||||| || || | ||||| | | Sbjct 12806 TCTCGGCGTGAATGTTCTCTATCATGATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGA 12865 Query 39972 TTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGG 40031 |||| ||||| | || | || | ||| || || || ||||| || |||| Sbjct 12866 TTTGGACCTCGCTGCTGAAGCGCTCGAGGAGATTCTCGTTGACAATTCCGTCTGACGCGG 12925 Query 40032 CAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT-------TTA 40084 | || || || | || || ||| || || ||||| |||| | || Sbjct 12926 CGAAGAAAGCGAGAACGTGGGAAATGAAGTAACGCTCATC----GTCATTGAGGCGGTTG 12981 Query 40085 TTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCT 40144 |||||||| | | || || || | ||| | || || || ||||| || ||||| ||| Sbjct 12982 TTCCAGTCGTGAAGGTCCTTGGAGAGATCAATCTCCTCTGCCGTCCAGAAAGACGCTTCT 13041 Query 40145 GCCTTTTTGTACATGTTCCATAT 40167 ||||| |||||||| | ||| || Sbjct 13042 GCCTTCTTGTACATCTGCCAGAT 13064 >seq25 Length=557695 Score = 109 bits (120), Expect = 8e-19 Identities = 176/250 (70%), Gaps = 5/250 (2%) Strand=Plus/Plus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTA-ATTAATTCGTTAGAAAATGTGA 39674 ||||||||||||| || |||||||| | | | | || | ||||| || || || | Sbjct 29555 GCAGGCGAAGTCAGTGTGGAGGCCCTCGT-TATGGGATATGAGCTCGTTCGAGAAGGTCA 29613 Query 39675 GTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGA 39734 | |||| ||| || |||||||| |||||||| || || | || || || || || |||| Sbjct 29614 GACCAGCCATGAGGCCACGCTTGTTGAGCCAGAAAATAGAGGCGAAGGAGCCGGAGAAGA 29673 Query 39735 AGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATT---AT 39791 |||| || || || || || || ||||| || | || | | | | ||| || | Sbjct 29674 AGATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGAGCAAAGGTAGAATCCTTGTCTT 29733 Query 39792 GTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCAT 39851 |||||||| | |||||| || || |||||||| | ||||| || || || || |||| Sbjct 29734 GTATCCACCTAACTGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTCTCAATGGCAT 29793 Query 39852 TAAAGAGATA 39861 | ||||| || Sbjct 29794 TGAAGAGGTA 29803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908087332120