Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016
-05-10] 83 sequences; 35,818,201 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq9 100 2e-16
>seq9
Length=1411183
Score = 100 bits (110), Expect = 2e-16
Identities = 298/456 (65%), Gaps = 13/456 (3%)
Strand=Plus/Minus
Query 19441 AATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACGACGTTTG 19500
|| |||||||| |||| ||||||| || |||||||| ||||| ||| | ||| |
Sbjct 725062 AACGGTCCTGAGGTCTTGAATAAATTCGTCGGTCAATCAGAAGAGAATATCCGAAACCTC 725003
Query 19501 TTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCG-CAAAAGTTCTTTGCACATTAT 19559
|||||||| || || ||||| | || | ||| | | | ||| | ||||||||
Sbjct 725002 TTTGCTGATGCCGAGAAAGAATACAAG-GAGAGGGGTGACGAGAGTGAGCTTCACATTAT 724944
Query 19560 AATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTGGTGTA---------AA 19610
|| | || ||| | || || | || ||||| |||||| |||||| |
Sbjct 724943 CATTTTCGACGAACTCGATGCTGTATGCAAGCAGAGAGGTGCTGGTGGTGGAGGTGGCAC 724884
Query 19611 TGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACCAACT 19670
||| || |||| ||||||||| || | || | ||| | || ||||| |||| ||
Sbjct 724883 TGGTGTTGGCGACAGTGTTGTCAACCAGTTGCTTGCCAAACTTGATGGTGTGGACCAGCT 724824
Query 19671 GAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGCCTTATT 19730
||||||||| | | || || ||||| ||| || |||| | || || |||||| |
Sbjct 724823 CAATAATATTATCCTGATCGGTATGACCAATCGAATGGATATGATTGATGACGCCTTGCT 724764
Query 19731 ACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGTGGACGTGT 19790
|| || || || |||| | | || || ||| |||||||||||| || |
Sbjct 724763 TCGTCCTGGACGTCTGGAGGTCCACATGGAGATTTCTCTACCCGATGAATCCGGCAGACA 724704
Query 19791 GGAAATTTTAAACATACATAC-ATCAACCATGCGACAAAATAACCTTTTAAATGACGATG 19849
|| ||| | ||||| || || || || ||||| | ||| | || | | ||||||
Sbjct 724703 AGATATTCTCAACATCCACACGATGAA-GATGCGCGATAATCATGTTATGGACAACGATG 724645
Query 19850 TAGATCTAGAAGAAATTGCAGCGGCTACCAAAAACT 19885
| | |||| || |||| || |||||| ||||
Sbjct 724644 TCAACCTAGCCGAGCTTGCGGCCCTTACCAAGAACT 724609
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455597948415
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |